RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 Q8N8P6 123 aa8.17□□□□□ -1.1
HERC1-214ENST00000561400 TMEM243Q9BU79 118 aa8.17□□□□□ -1.1
HERC1-214ENST00000561400 A0A087WWL8 130 aa8.17□□□□□ -1.1
HERC1-214ENST00000561400 TRBV7-6A0A0J9YX20 115 aa8.16□□□□□ -1.1
HERC1-214ENST00000561400 PRSS1P07477 247 aa8.16□□□□□ -1.1
HERC1-214ENST00000561400 HTN3P15516 51 aa8.16□□□□□ -1.1
HERC1-214ENST00000561400 C14orf178Q8N769 122 aaPredicted RBP8.16□□□□□ -1.1
HERC1-214ENST00000561400 IGHV3-73A0A0B4J1V6 119 aa8.15□□□□□ -1.1
HERC1-214ENST00000561400 LOC389332A0A1B0GUA5 103 aa8.15□□□□□ -1.1
HERC1-214ENST00000561400 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
HERC1-214ENST00000561400 FAM74A4Q5TZK3 123 aa8.15□□□□□ -1.1
HERC1-214ENST00000561400 CD164L2Q6UWJ8 174 aa8.15□□□□□ -1.1
HERC1-214ENST00000561400 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.1
HERC1-214ENST00000561400 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.1
HERC1-214ENST00000561400 DEFB131BA0A096LNP1 70 aa8.14□□□□□ -1.11
HERC1-214ENST00000561400 LINC00315P59091 139 aa8.14□□□□□ -1.11
HERC1-214ENST00000561400 A0A0B4J2C4 111 aa8.14□□□□□ -1.11
HERC1-214ENST00000561400 H7C423 109 aa8.14□□□□□ -1.11
HERC1-214ENST00000561400 RIGQ13278 110 aa8.14□□□□□ -1.11
HERC1-214ENST00000561400 Q6ZSN1 163 aa8.14□□□□□ -1.11
HERC1-214ENST00000561400 TRAV10A0A0B4J240 114 aa8.13□□□□□ -1.11
HERC1-214ENST00000561400 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
HERC1-214ENST00000561400 TRGV4A0A0C4DH28 118 aa8.13□□□□□ -1.11
HERC1-214ENST00000561400 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
HERC1-214ENST00000561400 PLNP26678 52 aa8.13□□□□□ -1.11
HERC1-214ENST00000561400 IGHV3-33P01772 117 aa8.12□□□□□ -1.11
HERC1-214ENST00000561400 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
HERC1-214ENST00000561400 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
HERC1-214ENST00000561400 STARD9Q9P2P6 4700 aa8.12□□□□□ -1.11
HERC1-214ENST00000561400 D6R8Y8 96 aa8.11□□□□□ -1.11
HERC1-214ENST00000561400 TIMM17BO60830 172 aa8.11□□□□□ -1.11
HERC1-214ENST00000561400 LINC00474Q9P2X8 69 aa8.11□□□□□ -1.11
HERC1-214ENST00000561400 DYNC2H1Q8NCM8 4307 aaKnown RBP8.11□□□□□ -1.11
HERC1-214ENST00000561400 ORMDL3Q8N138 153 aa8.11□□□□□ -1.11
HERC1-214ENST00000561400 SLC25A29Q8N8R3 303 aa8.11□□□□□ -1.11
HERC1-214ENST00000561400 VSIG2Q96IQ7 327 aa8.11□□□□□ -1.11
HERC1-214ENST00000561400 PRO0255Q9UI72 69 aa8.11□□□□□ -1.11
HERC1-214ENST00000561400 A0A0J9YY99 117 aa8.1□□□□□ -1.11
HERC1-214ENST00000561400 MGPP08493 103 aa8.1□□□□□ -1.11
HERC1-214ENST00000561400 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
HERC1-214ENST00000561400 F5H697 171 aa8.1□□□□□ -1.11
HERC1-214ENST00000561400 RHOHQ15669 191 aa8.1□□□□□ -1.11
HERC1-214ENST00000561400 LYPD5Q6UWN5 251 aa8.1□□□□□ -1.11
HERC1-214ENST00000561400 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
HERC1-214ENST00000561400 LOC100131303A0A0U1RQF7 123 aa8.09□□□□□ -1.11
HERC1-214ENST00000561400 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
HERC1-214ENST00000561400 SCGB1D4Q6XE38 83 aa8.09□□□□□ -1.11
HERC1-214ENST00000561400 TRBV30A0A0K0K1B3 111 aa8.09□□□□□ -1.12
HERC1-214ENST00000561400 IGHV3-30P01768 117 aa8.09□□□□□ -1.12
HERC1-214ENST00000561400 CCKP06307 115 aa8.09□□□□□ -1.12
HERC1-214ENST00000561400 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.12
HERC1-214ENST00000561400 SUMO4Q6EEV6 95 aa8.09□□□□□ -1.12
HERC1-214ENST00000561400 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
HERC1-214ENST00000561400 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
HERC1-214ENST00000561400 H7BZZ5 65 aa8.08□□□□□ -1.12
HERC1-214ENST00000561400 VPREB1P12018 145 aa8.08□□□□□ -1.12
HERC1-214ENST00000561400 ZNF815PA8K554 130 aa8.07□□□□□ -1.12
HERC1-214ENST00000561400 K7EQD1 137 aa8.07□□□□□ -1.12
HERC1-214ENST00000561400 M0QY20 66 aa8.07□□□□□ -1.12
HERC1-214ENST00000561400 GAS8-AS1O95177 125 aa8.07□□□□□ -1.12
HERC1-214ENST00000561400 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
HERC1-214ENST00000561400 GYPEP15421 78 aa8.06□□□□□ -1.12
HERC1-214ENST00000561400 MRPL51Q4U2R6 128 aaKnown RBP8.06□□□□□ -1.12
HERC1-214ENST00000561400 C6orf223Q8N319 242 aa8.06□□□□□ -1.12
HERC1-214ENST00000561400 IGHV1-58A0A0C4DH39 117 aa8.06□□□□□ -1.12
HERC1-214ENST00000561400 H3BNG1 76 aa8.06□□□□□ -1.12
HERC1-214ENST00000561400 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
HERC1-214ENST00000561400 XCL1P47992 114 aa8.05□□□□□ -1.12
HERC1-214ENST00000561400 CASC10Q5T4H9 136 aa8.05□□□□□ -1.12
HERC1-214ENST00000561400 PRR26Q8N8Z3 221 aa8.05□□□□□ -1.12
HERC1-214ENST00000561400 A0A096LPF7 62 aa8.05□□□□□ -1.12
HERC1-214ENST00000561400 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
HERC1-214ENST00000561400 LYSTQ99698 3801 aa8.05□□□□□ -1.12
HERC1-214ENST00000561400 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
HERC1-214ENST00000561400 TRBV10-1A0A0K0K1A3 114 aa8.04□□□□□ -1.12
HERC1-214ENST00000561400 C3orf84H3BNL1 204 aa8.04□□□□□ -1.12
HERC1-214ENST00000561400 F8VRH5 84 aa8.03□□□□□ -1.12
HERC1-214ENST00000561400 ICOSQ9Y6W8 199 aa8.03□□□□□ -1.12
HERC1-214ENST00000561400 TRAV12-1A0A0B4J245 112 aa8.03□□□□□ -1.12
HERC1-214ENST00000561400 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
HERC1-214ENST00000561400 CKS2P33552 79 aa8.03□□□□□ -1.12
HERC1-214ENST00000561400 KTN1-AS1Q86SY8 53 aa8.03□□□□□ -1.12
HERC1-214ENST00000561400 DAND5Q8N907 189 aa8.03□□□□□ -1.12
HERC1-214ENST00000561400 TIMM21Q9BVV7 248 aa8.03□□□□□ -1.12
HERC1-214ENST00000561400 TRIAP1O43715 76 aa8.02□□□□□ -1.13
HERC1-214ENST00000561400 RPL36AP83881 106 aaKnown RBP8.02□□□□□ -1.13
HERC1-214ENST00000561400 NRACQ8N912 160 aa8.02□□□□□ -1.13
HERC1-214ENST00000561400 RPL36ALQ969Q0 106 aaKnown RBP8.02□□□□□ -1.13
HERC1-214ENST00000561400 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
HERC1-214ENST00000561400 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
HERC1-214ENST00000561400 RBM3P98179 157 aaKnown RBP8.02□□□□□ -1.13
HERC1-214ENST00000561400 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
HERC1-214ENST00000561400 LGALS3P17931 250 aaKnown RBP8.01□□□□□ -1.13
HERC1-214ENST00000561400 Q1RN00 199 aa8.01□□□□□ -1.13
HERC1-214ENST00000561400 C20orf197Q8N268 126 aa8.01□□□□□ -1.13
HERC1-214ENST00000561400 PRSS2P07478 247 aa8.01□□□□□ -1.13
HERC1-214ENST00000561400 Q6JHZ5 121 aa8.01□□□□□ -1.13
HERC1-214ENST00000561400 IGHV3-38A0A0C4DH36 116 aa8□□□□□ -1.13
HERC1-214ENST00000561400 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
HERC1-214ENST00000561400 LST1O00453 97 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms