RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.25□□□□□ -1.25
SNX1-204ENST00000559061 J3QL48 77 aa7.25□□□□□ -1.25
SNX1-204ENST00000559061 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
SNX1-204ENST00000559061 LINC00469Q8N7U9 141 aa7.25□□□□□ -1.25
SNX1-204ENST00000559061 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
SNX1-204ENST00000559061 SPINK8P0C7L1 97 aa7.24□□□□□ -1.25
SNX1-204ENST00000559061 SEC11AP67812 179 aa7.24□□□□□ -1.25
SNX1-204ENST00000559061 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
SNX1-204ENST00000559061 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
SNX1-204ENST00000559061 TRAV12-1A0A0B4J245 112 aa7.23□□□□□ -1.25
SNX1-204ENST00000559061 IGLV5-39A0A0G2JS06 123 aa7.23□□□□□ -1.25
SNX1-204ENST00000559061 LORP23490 312 aaPredicted RBP7.23□□□□□ -1.25
SNX1-204ENST00000559061 NDUFA6P56556 154 aa7.23□□□□□ -1.25
SNX1-204ENST00000559061 COA6Q5JTJ3 125 aaKnown RBP7.23□□□□□ -1.25
SNX1-204ENST00000559061 Q8IZM0 81 aa7.23□□□□□ -1.25
SNX1-204ENST00000559061 A0A087WYN8 130 aa7.22□□□□□ -1.25
SNX1-204ENST00000559061 IGKV2-24A0A0C4DH68 120 aa7.22□□□□□ -1.25
SNX1-204ENST00000559061 EPM2AB3EWF7 344 aa7.22□□□□□ -1.25
SNX1-204ENST00000559061 ODF1Q14990 250 aa7.22□□□□□ -1.25
SNX1-204ENST00000559061 RNF151Q2KHN1 245 aa7.22□□□□□ -1.25
SNX1-204ENST00000559061 C9orf116Q5BN46 136 aaPredicted RBP7.22□□□□□ -1.25
SNX1-204ENST00000559061 PLAC8Q9NZF1 115 aa7.22□□□□□ -1.25
SNX1-204ENST00000559061 F8WDY8 70 aa7.21□□□□□ -1.26
SNX1-204ENST00000559061 NDUFA1O15239 70 aa7.21□□□□□ -1.26
SNX1-204ENST00000559061 LEPROTL1O95214 131 aa7.21□□□□□ -1.26
SNX1-204ENST00000559061 PTTG1IPP53801 180 aa7.21□□□□□ -1.26
SNX1-204ENST00000559061 Q5VSD8 79 aa7.21□□□□□ -1.26
SNX1-204ENST00000559061 KRTAP7-1Q8IUC3 87 aa7.21□□□□□ -1.26
SNX1-204ENST00000559061 CHTOPQ9Y3Y2 248 aaKnown RBP7.21□□□□□ -1.26
SNX1-204ENST00000559061 F8VRH5 84 aa7.2□□□□□ -1.26
SNX1-204ENST00000559061 TLX1NBP0CAT3 122 aa7.2□□□□□ -1.26
SNX1-204ENST00000559061 FABP4P15090 132 aa7.2□□□□□ -1.26
SNX1-204ENST00000559061 Q6ZRP5 223 aa7.2□□□□□ -1.26
SNX1-204ENST00000559061 LINC00528Q8N1L1 170 aa7.2□□□□□ -1.26
SNX1-204ENST00000559061 TOMM7Q9P0U1 55 aa7.2□□□□□ -1.26
SNX1-204ENST00000559061 LOC107984640A0A0U1RRK4 108 aa7.19□□□□□ -1.26
SNX1-204ENST00000559061 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
SNX1-204ENST00000559061 MAJINQ3KP22 176 aa7.19□□□□□ -1.26
SNX1-204ENST00000559061 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
SNX1-204ENST00000559061 PACRGQ96M98 296 aaPredicted RBP7.19□□□□□ -1.26
SNX1-204ENST00000559061 TRBV30A0A0K0K1B3 111 aa7.18□□□□□ -1.26
SNX1-204ENST00000559061 TMEM223A0PJW6 202 aa7.18□□□□□ -1.26
SNX1-204ENST00000559061 GAGE2BQ13066 116 aa7.18□□□□□ -1.26
SNX1-204ENST00000559061 PMCHL2Q9BQD1 86 aa7.18□□□□□ -1.26
SNX1-204ENST00000559061 FAM168BA1KXE4 195 aa7.17□□□□□ -1.26
SNX1-204ENST00000559061 H0Y8G0 127 aa7.17□□□□□ -1.26
SNX1-204ENST00000559061 RPL18AQ02543 176 aaKnown RBP7.17□□□□□ -1.26
SNX1-204ENST00000559061 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
SNX1-204ENST00000559061 STPG4Q8N801 248 aa7.17□□□□□ -1.26
SNX1-204ENST00000559061 HSPB8Q9UJY1 196 aa7.17□□□□□ -1.26
SNX1-204ENST00000559061 H3BRM9 83 aa7.16□□□□□ -1.26
SNX1-204ENST00000559061 PRSS2P07478 247 aa7.16□□□□□ -1.26
SNX1-204ENST00000559061 TSPEAR-AS2P59090 65 aa7.16□□□□□ -1.26
SNX1-204ENST00000559061 C6orf226Q5I0X4 101 aa7.16□□□□□ -1.26
SNX1-204ENST00000559061 TMEM170BQ5T4T1 132 aa7.16□□□□□ -1.26
SNX1-204ENST00000559061 SRRM2Q9UQ35 2752 aaKnown RBP7.16□□□□□ -1.26
SNX1-204ENST00000559061 NDUFC2-KCTD14E9PQ53 114 aa7.15□□□□□ -1.26
SNX1-204ENST00000559061 HNRNPA3P51991 378 aaKnown RBP7.15□□□□□ -1.26
SNX1-204ENST00000559061 KRTAP11-1Q8IUC1 163 aa7.15□□□□□ -1.26
SNX1-204ENST00000559061 ZNF625Q96I27 306 aaPredicted RBP7.15□□□□□ -1.26
SNX1-204ENST00000559061 MYCBP2O75592 4640 aa7.15□□□□□ -1.27
SNX1-204ENST00000559061 SYS1-DBNDD2H3BUS1 97 aa7.14□□□□□ -1.27
SNX1-204ENST00000559061 CXCL5P42830 114 aa7.14□□□□□ -1.27
SNX1-204ENST00000559061 CKS1BP61024 79 aa7.14□□□□□ -1.27
SNX1-204ENST00000559061 GAGE2EQ4V326 116 aa7.14□□□□□ -1.27
SNX1-204ENST00000559061 GAGE2DQ9UEU5 116 aa7.14□□□□□ -1.27
SNX1-204ENST00000559061 C3orf79P0CE67 100 aa7.13□□□□□ -1.27
SNX1-204ENST00000559061 LINC01545Q5VT33 79 aa7.13□□□□□ -1.27
SNX1-204ENST00000559061 LINC00474Q9P2X8 69 aa7.13□□□□□ -1.27
SNX1-204ENST00000559061 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
SNX1-204ENST00000559061 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
SNX1-204ENST00000559061 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
SNX1-204ENST00000559061 HIST3H2BBQ8N257 126 aa7.12□□□□□ -1.27
SNX1-204ENST00000559061 MAP1LC3CQ9BXW4 147 aa7.12□□□□□ -1.27
SNX1-204ENST00000559061 PKIGQ9Y2B9 76 aa7.12□□□□□ -1.27
SNX1-204ENST00000559061 DPM2O94777 84 aa7.11□□□□□ -1.27
SNX1-204ENST00000559061 PLNP26678 52 aa7.11□□□□□ -1.27
SNX1-204ENST00000559061 PHF5AQ7RTV0 110 aaKnown RBP7.11□□□□□ -1.27
SNX1-204ENST00000559061 Q8NDZ9 215 aa7.11□□□□□ -1.27
SNX1-204ENST00000559061 XAGE1AQ9HD64 81 aa7.11□□□□□ -1.27
SNX1-204ENST00000559061 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
SNX1-204ENST00000559061 IGKCP01834 107 aa7.1□□□□□ -1.27
SNX1-204ENST00000559061 RPL37AP61513 92 aaKnown RBP7.1□□□□□ -1.27
SNX1-204ENST00000559061 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
SNX1-204ENST00000559061 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
SNX1-204ENST00000559061 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
SNX1-204ENST00000559061 FAM19A5Q7Z5A7 132 aaPredicted RBP7.09□□□□□ -1.27
SNX1-204ENST00000559061 HIST1H2BLQ99880 126 aa7.09□□□□□ -1.27
SNX1-204ENST00000559061 PRR3P79522 188 aaKnown RBP7.08□□□□□ -1.28
SNX1-204ENST00000559061 ERG28Q9UKR5 140 aa7.08□□□□□ -1.28
SNX1-204ENST00000559061 LEPROTO15243 131 aa7.07□□□□□ -1.28
SNX1-204ENST00000559061 PLA2G1BP04054 148 aaKnown RBP7.07□□□□□ -1.28
SNX1-204ENST00000559061 INAFM2P0DMQ5 153 aa7.07□□□□□ -1.28
SNX1-204ENST00000559061 PFN2P35080 140 aa7.07□□□□□ -1.28
SNX1-204ENST00000559061 KRTDAPP60985 99 aa7.07□□□□□ -1.28
SNX1-204ENST00000559061 IGKV2D-26A0A0A0MRZ7 120 aa7.06□□□□□ -1.28
SNX1-204ENST00000559061 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
SNX1-204ENST00000559061 C5orf52A6NGY3 159 aa7.05□□□□□ -1.28
SNX1-204ENST00000559061 E9PLD3 99 aa7.05□□□□□ -1.28
SNX1-204ENST00000559061 J3QQQ9 107 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 409.6 ms