RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PLNP26678 52 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 CKS1BP61024 79 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 KIAA0087Q14695 138 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 PET117Q6UWS5 81 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 UNQ6190/PRO20217Q6UXQ8 127 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 LINC01561Q8N1V8 128 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 COX7B2Q8TF08 81 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 AKR1D1P51857 326 aa8.03□□□□□ -1.12
GABPB1-208ENST00000558970 HAMPP81172 84 aa8.03□□□□□ -1.12
GABPB1-208ENST00000558970 LINC01545Q5VT33 79 aa8.03□□□□□ -1.12
GABPB1-208ENST00000558970 Q8IZM0 81 aa8.03□□□□□ -1.12
GABPB1-208ENST00000558970 LINC00518Q8N0U6 118 aa8.03□□□□□ -1.12
GABPB1-208ENST00000558970 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
GABPB1-208ENST00000558970 C2orf48Q96LS8 159 aa8.03□□□□□ -1.12
GABPB1-208ENST00000558970 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
GABPB1-208ENST00000558970 S100A12P80511 92 aa8.02□□□□□ -1.13
GABPB1-208ENST00000558970 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
GABPB1-208ENST00000558970 IGKV2-24A0A0C4DH68 120 aa8.01□□□□□ -1.13
GABPB1-208ENST00000558970 C20orf202A1L168 122 aa8.01□□□□□ -1.13
GABPB1-208ENST00000558970 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
GABPB1-208ENST00000558970 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
GABPB1-208ENST00000558970 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
GABPB1-208ENST00000558970 IGLV5-39A0A0G2JS06 123 aa8□□□□□ -1.13
GABPB1-208ENST00000558970 CHTF8P0CG12 524 aa8□□□□□ -1.13
GABPB1-208ENST00000558970 FAM30AQ9NZY2 134 aa8□□□□□ -1.13
GABPB1-208ENST00000558970 HERVK_113P61574 105 aa7.99□□□□□ -1.13
GABPB1-208ENST00000558970 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
GABPB1-208ENST00000558970 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
GABPB1-208ENST00000558970 LRP1BQ9NZR2 4599 aa7.98□□□□□ -1.13
GABPB1-208ENST00000558970 A0A096LNI7 61 aa7.98□□□□□ -1.13
GABPB1-208ENST00000558970 PANO1I0J062 215 aa7.98□□□□□ -1.13
GABPB1-208ENST00000558970 STPG4Q8N801 248 aa7.98□□□□□ -1.13
GABPB1-208ENST00000558970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
GABPB1-208ENST00000558970 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
GABPB1-208ENST00000558970 CXCL5P42830 114 aa7.97□□□□□ -1.13
GABPB1-208ENST00000558970 TSPEAR-AS2P59090 65 aa7.97□□□□□ -1.13
GABPB1-208ENST00000558970 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
GABPB1-208ENST00000558970 DPH3Q96FX2 82 aa7.97□□□□□ -1.13
GABPB1-208ENST00000558970 C12orf57Q99622 126 aa7.97□□□□□ -1.13
GABPB1-208ENST00000558970 TRBV30A0A0K0K1B3 111 aa7.96□□□□□ -1.14
GABPB1-208ENST00000558970 LOC107984640A0A0U1RRK4 108 aa7.96□□□□□ -1.14
GABPB1-208ENST00000558970 F8WDY8 70 aa7.96□□□□□ -1.14
GABPB1-208ENST00000558970 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
GABPB1-208ENST00000558970 GAGE2EQ4V326 116 aa7.96□□□□□ -1.14
GABPB1-208ENST00000558970 GAGE2DQ9UEU5 116 aa7.96□□□□□ -1.14
GABPB1-208ENST00000558970 LEPROTO15243 131 aa7.95□□□□□ -1.14
GABPB1-208ENST00000558970 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
GABPB1-208ENST00000558970 PFN2P35080 140 aa7.95□□□□□ -1.14
GABPB1-208ENST00000558970 A0A0U1RRA0 63 aa7.94□□□□□ -1.14
GABPB1-208ENST00000558970 J3QQQ9 107 aa7.94□□□□□ -1.14
GABPB1-208ENST00000558970 RNF151Q2KHN1 245 aa7.94□□□□□ -1.14
GABPB1-208ENST00000558970 Q6ZRP5 223 aa7.94□□□□□ -1.14
GABPB1-208ENST00000558970 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
GABPB1-208ENST00000558970 NDUFA12Q9UI09 145 aa7.94□□□□□ -1.14
GABPB1-208ENST00000558970 HSPG2P98160 4391 aa7.94□□□□□ -1.14
GABPB1-208ENST00000558970 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
GABPB1-208ENST00000558970 DNAH8Q96JB1 4490 aa7.93□□□□□ -1.14
GABPB1-208ENST00000558970 IGKV2D-26A0A0A0MRZ7 120 aa7.93□□□□□ -1.14
GABPB1-208ENST00000558970 E9PLD3 99 aa7.93□□□□□ -1.14
GABPB1-208ENST00000558970 PTTG1IPP53801 180 aa7.93□□□□□ -1.14
GABPB1-208ENST00000558970 ANKRD39Q53RE8 183 aa7.93□□□□□ -1.14
GABPB1-208ENST00000558970 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
GABPB1-208ENST00000558970 NMUP48645 174 aa7.92□□□□□ -1.14
GABPB1-208ENST00000558970 MEIG1Q5JSS6 88 aa7.92□□□□□ -1.14
GABPB1-208ENST00000558970 SCXQ7RTU7 201 aa7.92□□□□□ -1.14
GABPB1-208ENST00000558970 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
GABPB1-208ENST00000558970 TTTY13Q9BZ97 58 aa7.92□□□□□ -1.14
GABPB1-208ENST00000558970 XAGE1AQ9HD64 81 aa7.92□□□□□ -1.14
GABPB1-208ENST00000558970 MYMXA0A1B0GTQ4 84 aa7.91□□□□□ -1.14
GABPB1-208ENST00000558970 XGP55808 180 aa7.91□□□□□ -1.14
GABPB1-208ENST00000558970 Q6ZSA8 131 aa7.91□□□□□ -1.14
GABPB1-208ENST00000558970 KRTAP4-5Q9BYR2 181 aa7.91□□□□□ -1.14
GABPB1-208ENST00000558970 ERG28Q9UKR5 140 aa7.91□□□□□ -1.14
GABPB1-208ENST00000558970 PKIGQ9Y2B9 76 aa7.91□□□□□ -1.14
GABPB1-208ENST00000558970 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
GABPB1-208ENST00000558970 SMR3BP02814 79 aaPredicted RBP7.9□□□□□ -1.14
GABPB1-208ENST00000558970 LINC00158P58513 81 aa7.9□□□□□ -1.14
GABPB1-208ENST00000558970 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
GABPB1-208ENST00000558970 A0A087WYN8 130 aa7.89□□□□□ -1.15
GABPB1-208ENST00000558970 HSBP1L1C9JCN9 74 aa7.89□□□□□ -1.15
GABPB1-208ENST00000558970 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
GABPB1-208ENST00000558970 SMIM13P0DJ93 91 aa7.89□□□□□ -1.15
GABPB1-208ENST00000558970 FAM19A5Q7Z5A7 132 aaPredicted RBP7.89□□□□□ -1.15
GABPB1-208ENST00000558970 ZNF815PA8K554 130 aa7.88□□□□□ -1.15
GABPB1-208ENST00000558970 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
GABPB1-208ENST00000558970 C9orf129Q5T035 196 aaKnown RBP7.88□□□□□ -1.15
GABPB1-208ENST00000558970 SFTA2Q6UW10 78 aa7.88□□□□□ -1.15
GABPB1-208ENST00000558970 HERV-K104P63124 156 aa7.87□□□□□ -1.15
GABPB1-208ENST00000558970 CIRBPQ14011 172 aaKnown RBP7.87□□□□□ -1.15
GABPB1-208ENST00000558970 JOSD1Q15040 202 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-208ENST00000558970 DAND5Q8N907 189 aa7.87□□□□□ -1.15
GABPB1-208ENST00000558970 LINC00474Q9P2X8 69 aa7.87□□□□□ -1.15
GABPB1-208ENST00000558970 A0A1W2PNN7 141 aa7.86□□□□□ -1.15
GABPB1-208ENST00000558970 NPC2P61916 151 aa7.86□□□□□ -1.15
GABPB1-208ENST00000558970 PCP2Q8IVA1 136 aa7.86□□□□□ -1.15
GABPB1-208ENST00000558970 HERC1Q15751 4861 aa7.85□□□□□ -1.15
GABPB1-208ENST00000558970 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
GABPB1-208ENST00000558970 PYY3Q5JQD4 70 aa7.85□□□□□ -1.15
GABPB1-208ENST00000558970 MIR7-3HGQ8N6C7 128 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms