RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TRGV4A0A0C4DH28 118 aa7.1□□□□□ -1.27
TPM1-212ENST00000558347 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
TPM1-212ENST00000558347 LINC00336Q6ZUF6 198 aa7.1□□□□□ -1.27
TPM1-212ENST00000558347 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.09□□□□□ -1.27
TPM1-212ENST00000558347 IGKV2-29A2NJV5 120 aaPredicted RBP7.09□□□□□ -1.27
TPM1-212ENST00000558347 K7EQD1 137 aa7.09□□□□□ -1.27
TPM1-212ENST00000558347 NDUFA1O15239 70 aa7.09□□□□□ -1.27
TPM1-212ENST00000558347 HERVK_113P63121 156 aa7.09□□□□□ -1.27
TPM1-212ENST00000558347 RPL36AP83881 106 aaKnown RBP7.09□□□□□ -1.27
TPM1-212ENST00000558347 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
TPM1-212ENST00000558347 DAZ4Q86SG3 579 aaKnown RBP7.09□□□□□ -1.27
TPM1-212ENST00000558347 MTURNQ8N3F0 131 aa7.09□□□□□ -1.27
TPM1-212ENST00000558347 RPL36ALQ969Q0 106 aaKnown RBP7.09□□□□□ -1.27
TPM1-212ENST00000558347 DAZ3Q9NR90 486 aaKnown RBP7.09□□□□□ -1.27
TPM1-212ENST00000558347 TRAV8-3A0A0A6YYJ7 113 aa7.08□□□□□ -1.28
TPM1-212ENST00000558347 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
TPM1-212ENST00000558347 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
TPM1-212ENST00000558347 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
TPM1-212ENST00000558347 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 TRAV26-1A0A087WT03 109 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 IGLV5-39A0A0G2JS06 123 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 DGAT2L7PQ6IED9 249 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 SFTA2Q6UW10 78 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 GTSF1LQ9H1H1 148 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 Q9UF83 564 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 PRO0255Q9UI72 69 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 LINC00588Q9Y4M8 146 aa7.07□□□□□ -1.28
TPM1-212ENST00000558347 TMEM262E9PQX1 116 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 SLC25A20O43772 301 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 SPINK8P0C7L1 97 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 CIRBPQ14011 172 aaKnown RBP7.06□□□□□ -1.28
TPM1-212ENST00000558347 CARD19Q96LW7 228 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 RYR1P21817 5038 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 H7C423 109 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 LINC00694P0DN24 101 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 Q1RN00 199 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 RNASE13Q5GAN3 156 aaKnown RBP7.06□□□□□ -1.28
TPM1-212ENST00000558347 ANKRD29Q8N6D5 301 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
TPM1-212ENST00000558347 C9JAW5 83 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 PRSS2P07478 247 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 COX6CP09669 75 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 CCL18P55774 89 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 LINC01620Q4KN68 170 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 ADAMTSL4-AS1Q5T5F5 129 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 CDKN2A-AS1Q9UH64 79 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 ICOSQ9Y6W8 199 aa7.05□□□□□ -1.28
TPM1-212ENST00000558347 TRBV10-2A0A0K0K1G8 114 aa7.04□□□□□ -1.28
TPM1-212ENST00000558347 NBDYA0A0U1RRE5 68 aa7.04□□□□□ -1.28
TPM1-212ENST00000558347 PAX4O43316 350 aa7.04□□□□□ -1.28
TPM1-212ENST00000558347 TRIAP1O43715 76 aa7.04□□□□□ -1.28
TPM1-212ENST00000558347 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
TPM1-212ENST00000558347 C1orf134Q5TEV5 83 aa7.04□□□□□ -1.28
TPM1-212ENST00000558347 GAGE12JA6NER3 117 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 H3BNG1 76 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
TPM1-212ENST00000558347 HERV-K104P63124 156 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 GAGE4Q13068 117 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 GAGE5Q13069 117 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 ESRGQ1W209 222 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
TPM1-212ENST00000558347 A0A096LPF7 62 aa7.02□□□□□ -1.29
TPM1-212ENST00000558347 LOC100131303A0A0U1RQF7 123 aa7.02□□□□□ -1.29
TPM1-212ENST00000558347 H3BT86 120 aa7.02□□□□□ -1.29
TPM1-212ENST00000558347 H7C2G1 150 aa7.02□□□□□ -1.29
TPM1-212ENST00000558347 NTM-AS1Q6ZSK4 140 aa7.02□□□□□ -1.29
TPM1-212ENST00000558347 TMEM243Q9BU79 118 aa7.02□□□□□ -1.29
TPM1-212ENST00000558347 CDC42SE2Q9NRR3 84 aa7.02□□□□□ -1.29
TPM1-212ENST00000558347 SMIM1B2RUZ4 78 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 GYPEP15421 78 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 COX6A2Q02221 97 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 Q9H8V8 135 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 A0A1B0GV72 72 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 LST1O00453 97 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 LINC00308Q8TCZ7 52 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 ZNF625Q96I27 306 aaPredicted RBP7.01□□□□□ -1.29
TPM1-212ENST00000558347 UPK3BQ9BT76 320 aa7.01□□□□□ -1.29
TPM1-212ENST00000558347 UBE2L6O14933 153 aa7□□□□□ -1.29
TPM1-212ENST00000558347 TNP2Q05952 138 aa7□□□□□ -1.29
TPM1-212ENST00000558347 MRPL23Q16540 153 aaKnown RBP7□□□□□ -1.29
TPM1-212ENST00000558347 ABCA13Q86UQ4 5058 aa6.99□□□□□ -1.29
TPM1-212ENST00000558347 HSPG2P98160 4391 aa6.99□□□□□ -1.29
TPM1-212ENST00000558347 NTN5Q8WTR8 489 aaPredicted RBP6.98□□□□□ -1.29
TPM1-212ENST00000558347 UBE2WQ96B02 151 aa6.98□□□□□ -1.29
TPM1-212ENST00000558347 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
TPM1-212ENST00000558347 TRBV6-8A0A0A6YYG3 113 aa6.97□□□□□ -1.29
TPM1-212ENST00000558347 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
TPM1-212ENST00000558347 XGP55808 180 aa6.97□□□□□ -1.29
TPM1-212ENST00000558347 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
TPM1-212ENST00000558347 MT-ATP8P03928 68 aa6.96□□□□□ -1.29
TPM1-212ENST00000558347 TTC32Q5I0X7 151 aa6.96□□□□□ -1.29
TPM1-212ENST00000558347 FAM240AA0A1B0GVK7 77 aa6.96□□□□□ -1.3
TPM1-212ENST00000558347 COX7A2LO14548 114 aa6.96□□□□□ -1.3
TPM1-212ENST00000558347 NPC2P61916 151 aa6.96□□□□□ -1.3
TPM1-212ENST00000558347 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms