RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 WFDC2Q14508 124 aa3.92□□□□□ -1.78
FOXN3-218ENST00000557718 MIAQ16674 131 aa3.92□□□□□ -1.78
FOXN3-218ENST00000557718 PAPPA-AS1Q5QFB9 102 aa3.92□□□□□ -1.78
FOXN3-218ENST00000557718 C2orf88Q9BSF0 95 aa3.92□□□□□ -1.78
FOXN3-218ENST00000557718 Q9HAA7 133 aa3.92□□□□□ -1.78
FOXN3-218ENST00000557718 IGKV2D-26A0A0A0MRZ7 120 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 TRAV8-3A0A0A6YYJ7 113 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 TRAV8-4A0A0B4J246 113 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 IGLV5-39A0A0G2JS06 123 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 DPM2O94777 84 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 IGKCP01834 107 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 CRPP02741 224 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 TSPEAR-AS2P59090 65 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 CD164L2Q6UWJ8 174 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 C5orf38Q86SI9 138 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 C10orf126Q8N4M7 172 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 C15orf56Q8N910 161 aa3.91□□□□□ -1.78
FOXN3-218ENST00000557718 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.78
FOXN3-218ENST00000557718 IGKV2D-24A0A075B6R9 120 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 A0A087WZ39 114 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 TMEM223A0PJW6 202 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 SMIM1B2RUZ4 78 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 K7EP13 123 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 SCGB1D1O95968 90 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 SPINK8P0C7L1 97 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 PLNP26678 52 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 HERVK_113P63121 156 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 SS18Q15532 418 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 TTC32Q5I0X7 151 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 LINC00469Q8N7U9 141 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 STPG4Q8N801 248 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 TP73-AS1Q9UF72 201 aa3.9□□□□□ -1.79
FOXN3-218ENST00000557718 TRAV9-2A0A087WT02 112 aa3.89□□□□□ -1.79
FOXN3-218ENST00000557718 LRCOL1A6NCL2 159 aa3.89□□□□□ -1.79
FOXN3-218ENST00000557718 RTL8CO15255 209 aa3.89□□□□□ -1.79
FOXN3-218ENST00000557718 KIAA0087Q14695 138 aa3.89□□□□□ -1.79
FOXN3-218ENST00000557718 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
FOXN3-218ENST00000557718 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
FOXN3-218ENST00000557718 TTTY13Q9BZ97 58 aa3.89□□□□□ -1.79
FOXN3-218ENST00000557718 GEMIN7Q9H840 131 aaKnown RBP3.89□□□□□ -1.79
FOXN3-218ENST00000557718 PKHD1P08F94 4074 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 IGHV3-64A0A075B6Q5 118 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 C20orf202A1L168 122 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 COX7A2LO14548 114 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 LECT2O14960 151 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 SMIM6P0DI80 62 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 SEC11AP67812 179 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 C6orf223Q8N319 242 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 LINC00526Q96FQ7 95 aa3.88□□□□□ -1.79
FOXN3-218ENST00000557718 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 IGHV1-58A0A0C4DH39 117 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 USP17L23D6RBM5 183 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 E9PLD3 99 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 HIGD2BQ4VC39 106 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 LINC00518Q8N0U6 118 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 ORAOV1Q8WV07 137 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 PAM16Q9Y3D7 125 aa3.87□□□□□ -1.79
FOXN3-218ENST00000557718 GVQW2A0A096LPI5 108 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-218ENST00000557718 LEPROTO15243 131 aa3.86□□□□□ -1.79
FOXN3-218ENST00000557718 SPATA45Q537H7 98 aa3.86□□□□□ -1.79
FOXN3-218ENST00000557718 C1orf134Q5TEV5 83 aa3.86□□□□□ -1.79
FOXN3-218ENST00000557718 C2orf82Q6UX34 121 aa3.86□□□□□ -1.79
FOXN3-218ENST00000557718 RMI2Q96E14 147 aa3.86□□□□□ -1.79
FOXN3-218ENST00000557718 A0A087WTM6 91 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 H3BRM9 83 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 J3QQQ9 107 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 MT3P25713 68 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 FUSP35637 526 aaKnown RBP eCLIP3.85□□□□□ -1.793e-8■□□□□ 10.9
FOXN3-218ENST00000557718 SPAG11BQ08648 103 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 Q8IZM0 81 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 COX7B2Q8TF08 81 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-218ENST00000557718 C12orf57Q99622 126 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 VAMP8Q9BV40 100 aa3.85□□□□□ -1.79
FOXN3-218ENST00000557718 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
FOXN3-218ENST00000557718 NDUFA1O15239 70 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 COX8AP10176 69 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 NMUP48645 174 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 HERVK_113P61574 105 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 UNQ6190/PRO20217Q6UXQ8 127 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 Q6ZRU5 148 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 BOD1L2Q8IYS8 172 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 TOMM7Q9P0U1 55 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 C6orf48Q9UBA6 75 aa3.84□□□□□ -1.79
FOXN3-218ENST00000557718 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.79
FOXN3-218ENST00000557718 PSCAO43653 123 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 APOMO95445 188 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 C9orf116Q5BN46 136 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-218ENST00000557718 C2orf91Q6ZV80 131 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 Q8N814 137 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 C14orf144Q96I85 54 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 C2orf48Q96LS8 159 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 LITAFQ99732 161 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 PRO1933Q9H354 126 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
FOXN3-218ENST00000557718 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms