RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 LEPROTL1O95214 131 aa10.59□□□□□ -0.71
NEK9-211ENST00000557673 HNRNPA3P51991 378 aaKnown RBP10.59□□□□□ -0.71
NEK9-211ENST00000557673 COA6Q5JTJ3 125 aaKnown RBP10.59□□□□□ -0.71
NEK9-211ENST00000557673 SDIM1Q6ZPB5 146 aa10.59□□□□□ -0.71
NEK9-211ENST00000557673 LINC00469Q8N7U9 141 aa10.59□□□□□ -0.71
NEK9-211ENST00000557673 TRAV12-1A0A0B4J245 112 aa10.58□□□□□ -0.72
NEK9-211ENST00000557673 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
NEK9-211ENST00000557673 PKHD1L1Q86WI1 4243 aa10.58□□□□□ -0.72
NEK9-211ENST00000557673 C2orf48Q96LS8 159 aa10.57□□□□□ -0.72
NEK9-211ENST00000557673 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
NEK9-211ENST00000557673 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
NEK9-211ENST00000557673 SYCNQ0VAF6 134 aa10.56□□□□□ -0.72
NEK9-211ENST00000557673 MT1HL1P0DM35 61 aa10.55□□□□□ -0.72
NEK9-211ENST00000557673 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
NEK9-211ENST00000557673 KIAA0087Q14695 138 aa10.55□□□□□ -0.72
NEK9-211ENST00000557673 DPH3Q96FX2 82 aa10.55□□□□□ -0.72
NEK9-211ENST00000557673 PACRGQ96M98 296 aaPredicted RBP10.55□□□□□ -0.72
NEK9-211ENST00000557673 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
NEK9-211ENST00000557673 CHTOPQ9Y3Y2 248 aaKnown RBP10.55□□□□□ -0.72
NEK9-211ENST00000557673 C11orf86A6NJI1 115 aa10.54□□□□□ -0.72
NEK9-211ENST00000557673 CHTF8P0CG12 524 aa10.54□□□□□ -0.72
NEK9-211ENST00000557673 FABP4P15090 132 aa10.54□□□□□ -0.72
NEK9-211ENST00000557673 F8VRH5 84 aa10.53□□□□□ -0.72
NEK9-211ENST00000557673 F8WDY8 70 aa10.53□□□□□ -0.72
NEK9-211ENST00000557673 ODF1Q14990 250 aa10.53□□□□□ -0.72
NEK9-211ENST00000557673 Q8IZM0 81 aa10.53□□□□□ -0.72
NEK9-211ENST00000557673 MRPL35Q9NZE8 188 aaKnown RBP10.53□□□□□ -0.72
NEK9-211ENST00000557673 H0Y8G0 127 aa10.52□□□□□ -0.73
NEK9-211ENST00000557673 H3BRM9 83 aa10.52□□□□□ -0.73
NEK9-211ENST00000557673 NDUFA1O15239 70 aa10.52□□□□□ -0.73
NEK9-211ENST00000557673 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
NEK9-211ENST00000557673 CIRBPQ14011 172 aaKnown RBP10.52□□□□□ -0.73
NEK9-211ENST00000557673 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
NEK9-211ENST00000557673 PRSS2P07478 247 aa10.5□□□□□ -0.73
NEK9-211ENST00000557673 C10orf25Q5T742 122 aa10.5□□□□□ -0.73
NEK9-211ENST00000557673 SPACA4Q8TDM5 124 aa10.5□□□□□ -0.73
NEK9-211ENST00000557673 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
NEK9-211ENST00000557673 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
NEK9-211ENST00000557673 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
NEK9-211ENST00000557673 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
NEK9-211ENST00000557673 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
NEK9-211ENST00000557673 A0A087WYN8 130 aa10.48□□□□□ -0.73
NEK9-211ENST00000557673 RNF151Q2KHN1 245 aa10.48□□□□□ -0.73
NEK9-211ENST00000557673 UNQ6190/PRO20217Q6UXQ8 127 aa10.48□□□□□ -0.73
NEK9-211ENST00000557673 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
NEK9-211ENST00000557673 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
NEK9-211ENST00000557673 RNF213Q63HN8 5207 aa10.47□□□□□ -0.73
NEK9-211ENST00000557673 A0A096LNI7 61 aa10.47□□□□□ -0.73
NEK9-211ENST00000557673 CXCL5P42830 114 aa10.47□□□□□ -0.73
NEK9-211ENST00000557673 C7orf33Q8WU49 177 aa10.47□□□□□ -0.73
NEK9-211ENST00000557673 IGKV2-24A0A0C4DH68 120 aa10.46□□□□□ -0.73
NEK9-211ENST00000557673 TRBV30A0A0K0K1B3 111 aa10.46□□□□□ -0.73
NEK9-211ENST00000557673 LOC107984640A0A0U1RRK4 108 aa10.46□□□□□ -0.73
NEK9-211ENST00000557673 PLNP26678 52 aa10.46□□□□□ -0.73
NEK9-211ENST00000557673 CKS1BP61024 79 aa10.46□□□□□ -0.73
NEK9-211ENST00000557673 C6orf226Q5I0X4 101 aa10.46□□□□□ -0.73
NEK9-211ENST00000557673 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
NEK9-211ENST00000557673 SYS1-DBNDD2H3BUS1 97 aa10.45□□□□□ -0.74
NEK9-211ENST00000557673 PMCHL2Q9BQD1 86 aa10.45□□□□□ -0.74
NEK9-211ENST00000557673 DPM2O94777 84 aa10.44□□□□□ -0.74
NEK9-211ENST00000557673 PLAC8Q9NZF1 115 aa10.44□□□□□ -0.74
NEK9-211ENST00000557673 TLX1NBP0CAT3 122 aa10.43□□□□□ -0.74
NEK9-211ENST00000557673 PTTG1IPP53801 180 aa10.43□□□□□ -0.74
NEK9-211ENST00000557673 RPL18AQ02543 176 aaKnown RBP10.43□□□□□ -0.74
NEK9-211ENST00000557673 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
NEK9-211ENST00000557673 HIST3H2BBQ8N257 126 aa10.43□□□□□ -0.74
NEK9-211ENST00000557673 C3orf79P0CE67 100 aa10.42□□□□□ -0.74
NEK9-211ENST00000557673 LINC00474Q9P2X8 69 aa10.42□□□□□ -0.74
NEK9-211ENST00000557673 IGKCP01834 107 aa10.41□□□□□ -0.74
NEK9-211ENST00000557673 S100A6P06703 90 aa10.41□□□□□ -0.74
NEK9-211ENST00000557673 C9orf116Q5BN46 136 aaPredicted RBP10.41□□□□□ -0.74
NEK9-211ENST00000557673 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
NEK9-211ENST00000557673 PET117Q6UWS5 81 aa10.41□□□□□ -0.74
NEK9-211ENST00000557673 KRTDAPP60985 99 aa10.4□□□□□ -0.74
NEK9-211ENST00000557673 GAGE2BQ13066 116 aa10.4□□□□□ -0.74
NEK9-211ENST00000557673 Q6ZRP5 223 aa10.4□□□□□ -0.74
NEK9-211ENST00000557673 STPG4Q8N801 248 aa10.4□□□□□ -0.74
NEK9-211ENST00000557673 LINC01600Q96MT4 127 aa10.4□□□□□ -0.74
NEK9-211ENST00000557673 LRP2P98164 4655 aa10.4□□□□□ -0.75
NEK9-211ENST00000557673 NDUFC2-KCTD14E9PQ53 114 aa10.39□□□□□ -0.75
NEK9-211ENST00000557673 HIST1H2BLQ99880 126 aa10.39□□□□□ -0.75
NEK9-211ENST00000557673 S100A2P29034 98 aa10.37□□□□□ -0.75
NEK9-211ENST00000557673 SFTA2Q6UW10 78 aa10.37□□□□□ -0.75
NEK9-211ENST00000557673 ZNF625Q96I27 306 aaPredicted RBP10.37□□□□□ -0.75
NEK9-211ENST00000557673 HERVK_113P61574 105 aa10.36□□□□□ -0.75
NEK9-211ENST00000557673 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
NEK9-211ENST00000557673 TNXBP22105 4242 aa10.35□□□□□ -0.75
NEK9-211ENST00000557673 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
NEK9-211ENST00000557673 SNRPEP62304 92 aaKnown RBP10.35□□□□□ -0.75
NEK9-211ENST00000557673 C20orf202A1L168 122 aa10.34□□□□□ -0.75
NEK9-211ENST00000557673 C5orf52A6NGY3 159 aa10.34□□□□□ -0.75
NEK9-211ENST00000557673 LEPROTO15243 131 aa10.34□□□□□ -0.75
NEK9-211ENST00000557673 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
NEK9-211ENST00000557673 REG3GQ6UW15 175 aa10.34□□□□□ -0.75
NEK9-211ENST00000557673 GAGE2DQ9UEU5 116 aa10.34□□□□□ -0.75
NEK9-211ENST00000557673 PLEKHB2Q96CS7 222 aa10.33□□□□□ -0.76
NEK9-211ENST00000557673 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
NEK9-211ENST00000557673 SPINK6Q6UWN8 80 aa10.32□□□□□ -0.76
NEK9-211ENST00000557673 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
NEK9-211ENST00000557673 A0A1W2PNN7 141 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms