RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 LOC100130705A0A1B0GUX0 176 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 GNG14A0A1W2PPG7 69 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 H3BNG1 76 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 ZZEF1O43149 2961 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 RPS25P62851 125 aaKnown RBP-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 UBA52P62987 128 aaKnown RBP-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 DEFA5Q01523 94 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 SMCO1Q147U7 214 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 AKAP14Q86UN6 197 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 AIF1LQ9BQI0 150 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 SNRNP25Q9BV90 132 aaKnown RBP-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 PAIP2BQ9ULR5 123 aaKnown RBP-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 ARAP2Q8WZ64 1704 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 ARHGEF5Q12774 1597 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 TEX15Q9BXT5 2789 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 EHBP1L1Q8N3D4 1523 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 ADGRL2O95490 1459 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 PLEKHH2Q8IVE3 1493 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 CPSF1Q10570 1443 aaKnown RBP-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 RELNP78509 3460 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 F6UZH7 168 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 K7ERU9 68 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 M0R129 80 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 COPZ1P61923 177 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 COMMD6Q7Z4G1 85 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 C8orf59Q8N0T1 100 aaPredicted RBP-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 MRPL34Q9BQ48 92 aaKnown RBP-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 SELENOSQ9BQE4 189 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 HIGD1BQ9P298 99 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 UQCR10Q9UDW1 63 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 LRRC37AA6NMS7 1700 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 PKD1L2Q7Z442 2459 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 MAPKBP1O60336 1514 aa-0.79□□□□□ -2.54
LINC00871-202ENST00000556071 ANK3Q12955 4377 aaKnown RBP-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 ANKRD11Q6UB99 2663 aaPredicted RBP-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 DMXL1Q9Y485 3027 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 PLECQ15149 4684 aaKnown RBP-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 CKS1BP61024 79 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 SEC11AP67812 179 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 C9orf153Q5TBE3 101 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 COX6B2Q6YFQ2 88 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 FAM223AQ8IWN6 122 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 LSM10Q969L4 123 aaKnown RBP-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 SMIM3Q9BZL3 60 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 TPT1P8Q9HAU6 139 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 LYSTQ99698 3801 aa-0.8□□□□□ -2.54
LINC00871-202ENST00000556071 ANKRD50Q9ULJ7 1429 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 SHROOM2Q13796 1616 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 A0A1B0GU69 56 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 A0A1B0GWA3 101 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 CHKB-CPT1BH3BT56 60 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 K7EP34 96 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 COX6CP09669 75 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 KRTAP19-5Q3LI72 72 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 Q56UQ5 140 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 WFDC13Q8IUB5 93 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 FDCSPQ8NFU4 85 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 LCN9Q8WX39 176 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 PYDC1Q8WXC3 89 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 PFDN5Q99471 154 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 ARL2-SNX15V9GYD0 113 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 BTAF1O14981 1849 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 MAP3K1Q13233 1512 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 A2ML1A8K2U0 1454 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 DNAH11Q96DT5 4516 aa-0.81□□□□□ -2.54
LINC00871-202ENST00000556071 DSPP15924 2871 aaKnown RBP-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 WDR87Q6ZQQ6 2873 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 PSME4Q14997 1843 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 TRAV30A0A087WSZ9 112 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 APOC2P02655 101 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 SELENOWP63302 87 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 MT1XP80297 61 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 SMIM21Q3B7S5 101 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 NMSQ5H8A3 153 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 PP6455Q8WZ26 134 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 TSLPQ969D9 159 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 PDCD10Q9BUL8 212 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 VPS13BQ7Z7G8 4022 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 CEP290O15078 2479 aa-0.82□□□□□ -2.54
LINC00871-202ENST00000556071 USP9XQ93008 2570 aaPredicted RBP-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 A0A0G2JND7 137 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 UBE2L5PA0A1B0GUS4 154 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 FGF7P21781 194 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 ATP5EP56381 51 aaPredicted RBP-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 UBE2L3P68036 154 aaKnown RBP-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 HEPN1Q6WQI6 88 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 C6orf201Q7Z4U5 140 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 ANP32BQ92688 251 aaKnown RBP-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 LINC00474Q9P2X8 69 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 PRO1854Q9UHT4 67 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 DNAH1Q9P2D7 4330 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 SPEF2Q9C093 1822 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 NAIPQ13075 1403 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 CCDC168Q8NDH2 2452 aa-0.83□□□□□ -2.54
LINC00871-202ENST00000556071 NUP188Q5SRE5 1749 aa-0.84□□□□□ -2.54
LINC00871-202ENST00000556071 COL12A1Q99715 3063 aa-0.84□□□□□ -2.54
LINC00871-202ENST00000556071 ACACBO00763 2458 aa-0.84□□□□□ -2.54
LINC00871-202ENST00000556071 FAM223BA6NKX1 122 aa-0.84□□□□□ -2.54
LINC00871-202ENST00000556071 H0YAA0 97 aa-0.84□□□□□ -2.54
LINC00871-202ENST00000556071 H3BQF6 201 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms