RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RNF151Q2KHN1 245 aa8.11□□□□□ -1.11
SHMT2-221ENST00000555773 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
SHMT2-221ENST00000555773 ATOH7Q8N100 152 aa8.1□□□□□ -1.11
SHMT2-221ENST00000555773 C9orf163Q8N9P6 203 aa8.1□□□□□ -1.11
SHMT2-221ENST00000555773 CARD19Q96LW7 228 aa8.1□□□□□ -1.11
SHMT2-221ENST00000555773 TRBV30A0A0K0K1B3 111 aa8.09□□□□□ -1.11
SHMT2-221ENST00000555773 J3QQQ9 107 aa8.09□□□□□ -1.11
SHMT2-221ENST00000555773 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
SHMT2-221ENST00000555773 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
SHMT2-221ENST00000555773 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
SHMT2-221ENST00000555773 Q6ZRU5 148 aa8.09□□□□□ -1.11
SHMT2-221ENST00000555773 LGALS3P17931 250 aaKnown RBP8.08□□□□□ -1.12
SHMT2-221ENST00000555773 NMUP48645 174 aa8.08□□□□□ -1.12
SHMT2-221ENST00000555773 PYY3Q5JQD4 70 aa8.08□□□□□ -1.12
SHMT2-221ENST00000555773 PKIGQ9Y2B9 76 aa8.08□□□□□ -1.12
SHMT2-221ENST00000555773 MYMXA0A1B0GTQ4 84 aa8.07□□□□□ -1.12
SHMT2-221ENST00000555773 HERV-K104P63124 156 aa8.07□□□□□ -1.12
SHMT2-221ENST00000555773 C10orf25Q5T742 122 aa8.07□□□□□ -1.12
SHMT2-221ENST00000555773 ZNF625Q96I27 306 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-221ENST00000555773 NDUFA12Q9UI09 145 aa8.07□□□□□ -1.12
SHMT2-221ENST00000555773 PKD1P98161 4303 aa8.07□□□□□ -1.12
SHMT2-221ENST00000555773 LINC00587B1AMM8 73 aa8.06□□□□□ -1.12
SHMT2-221ENST00000555773 GCSHP23434 173 aa8.06□□□□□ -1.12
SHMT2-221ENST00000555773 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
SHMT2-221ENST00000555773 C6orf48Q9UBA6 75 aa8.06□□□□□ -1.12
SHMT2-221ENST00000555773 IGKV2D-26A0A0A0MRZ7 120 aa8.05□□□□□ -1.12
SHMT2-221ENST00000555773 TSPEAR-AS2P59090 65 aa8.05□□□□□ -1.12
SHMT2-221ENST00000555773 MAJINQ3KP22 176 aa8.05□□□□□ -1.12
SHMT2-221ENST00000555773 SDIM1Q6ZPB5 146 aa8.05□□□□□ -1.12
SHMT2-221ENST00000555773 DNAH5Q8TE73 4624 aa8.04□□□□□ -1.12
SHMT2-221ENST00000555773 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
SHMT2-221ENST00000555773 FUSP35637 526 aaKnown RBP eCLIP8.04□□□□□ -1.12
SHMT2-221ENST00000555773 COX17Q14061 63 aa8.04□□□□□ -1.12
SHMT2-221ENST00000555773 LOC107984640A0A0U1RRK4 108 aa8.03□□□□□ -1.12
SHMT2-221ENST00000555773 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
SHMT2-221ENST00000555773 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
SHMT2-221ENST00000555773 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
SHMT2-221ENST00000555773 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-221ENST00000555773 DYNC1H1Q14204 4646 aaKnown RBP8.02□□□□□ -1.13
SHMT2-221ENST00000555773 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
SHMT2-221ENST00000555773 LINC01620Q4KN68 170 aa8.01□□□□□ -1.13
SHMT2-221ENST00000555773 LINC00474Q9P2X8 69 aa8.01□□□□□ -1.13
SHMT2-221ENST00000555773 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
SHMT2-221ENST00000555773 S100A12P80511 92 aa8□□□□□ -1.13
SHMT2-221ENST00000555773 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
SHMT2-221ENST00000555773 SPATA45Q537H7 98 aa8□□□□□ -1.13
SHMT2-221ENST00000555773 MEIG1Q5JSS6 88 aa8□□□□□ -1.13
SHMT2-221ENST00000555773 PAM16Q9Y3D7 125 aa8□□□□□ -1.13
SHMT2-221ENST00000555773 HECTD4Q9Y4D8 3996 aa8□□□□□ -1.13
SHMT2-221ENST00000555773 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 SMIM6P0DI80 62 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 PFN2P35080 140 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 LINC00158P58513 81 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 KRTAP10-1P60331 282 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 Q6ZRP5 223 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
SHMT2-221ENST00000555773 DLEU1O43261 78 aa7.98□□□□□ -1.13
SHMT2-221ENST00000555773 TIMM17BO60830 172 aa7.98□□□□□ -1.13
SHMT2-221ENST00000555773 COX8AP10176 69 aa7.98□□□□□ -1.13
SHMT2-221ENST00000555773 PTTG1IPP53801 180 aa7.98□□□□□ -1.13
SHMT2-221ENST00000555773 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
SHMT2-221ENST00000555773 GAGE2BQ13066 116 aa7.98□□□□□ -1.13
SHMT2-221ENST00000555773 SMIM13P0DJ93 91 aa7.97□□□□□ -1.13
SHMT2-221ENST00000555773 GAGE2EQ4V326 116 aa7.97□□□□□ -1.13
SHMT2-221ENST00000555773 SCGB1D4Q6XE38 83 aa7.97□□□□□ -1.13
SHMT2-221ENST00000555773 BOD1L2Q8IYS8 172 aa7.97□□□□□ -1.13
SHMT2-221ENST00000555773 GAGE2DQ9UEU5 116 aa7.97□□□□□ -1.13
SHMT2-221ENST00000555773 PKHD1P08F94 4074 aa7.97□□□□□ -1.13
SHMT2-221ENST00000555773 EPPK1P58107 5090 aaKnown RBP7.96□□□□□ -1.13
SHMT2-221ENST00000555773 A0A096LNI7 61 aa7.96□□□□□ -1.14
SHMT2-221ENST00000555773 Q6ZSA8 131 aa7.96□□□□□ -1.14
SHMT2-221ENST00000555773 DPH3Q96FX2 82 aa7.96□□□□□ -1.14
SHMT2-221ENST00000555773 DNAH8Q96JB1 4490 aa7.96□□□□□ -1.14
SHMT2-221ENST00000555773 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
SHMT2-221ENST00000555773 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
SHMT2-221ENST00000555773 C14orf144Q96I85 54 aa7.95□□□□□ -1.14
SHMT2-221ENST00000555773 SLC25A34Q6PIV7 304 aa7.94□□□□□ -1.14
SHMT2-221ENST00000555773 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
SHMT2-221ENST00000555773 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
SHMT2-221ENST00000555773 SND1-IT1Q9HBX3 110 aa7.94□□□□□ -1.14
SHMT2-221ENST00000555773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
SHMT2-221ENST00000555773 TMEM238C9JI98 176 aa7.93□□□□□ -1.14
SHMT2-221ENST00000555773 CHTF8P0CG12 524 aa7.93□□□□□ -1.14
SHMT2-221ENST00000555773 Q6ZVH6 145 aa7.93□□□□□ -1.14
SHMT2-221ENST00000555773 LITAFQ99732 161 aa7.93□□□□□ -1.14
SHMT2-221ENST00000555773 XAGE1AQ9HD64 81 aa7.93□□□□□ -1.14
SHMT2-221ENST00000555773 FAM30AQ9NZY2 134 aa7.93□□□□□ -1.14
SHMT2-221ENST00000555773 LOC107984156A0A0G2JMH3 177 aa7.92□□□□□ -1.14
SHMT2-221ENST00000555773 PANO1I0J062 215 aa7.92□□□□□ -1.14
SHMT2-221ENST00000555773 C9orf129Q5T035 196 aaKnown RBP7.92□□□□□ -1.14
SHMT2-221ENST00000555773 ADAMTSL4-AS1Q5T5F5 129 aa7.92□□□□□ -1.14
SHMT2-221ENST00000555773 ARL17AQ8IVW1 177 aa7.92□□□□□ -1.14
SHMT2-221ENST00000555773 LINC00518Q8N0U6 118 aa7.92□□□□□ -1.14
SHMT2-221ENST00000555773 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
SHMT2-221ENST00000555773 COPS9Q8WXC6 57 aa7.91□□□□□ -1.14
SHMT2-221ENST00000555773 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
SHMT2-221ENST00000555773 A0A087WYN8 130 aa7.9□□□□□ -1.14
SHMT2-221ENST00000555773 EPM2AB3EWF7 344 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms