RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 Q9H8V8 135 aa2.89□□□□□ -1.95
FOXN3-210ENST00000555658 NXT2Q9NPJ8 142 aaKnown RBP2.89□□□□□ -1.95
FOXN3-210ENST00000555658 DNHD1Q96M86 4753 aa2.89□□□□□ -1.95
FOXN3-210ENST00000555658 MGAM2Q2M2H8 2515 aa2.89□□□□□ -1.95
FOXN3-210ENST00000555658 TRBV10-1A0A0K0K1A3 114 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 TRBV6-5A0A0K0K1A5 114 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 LOC389332A0A1B0GUA5 103 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 TRBV6-4A0A1B0GX49 114 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 SMKR1H3BMG3 65 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 K7EMI3 77 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 M0QY20 66 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 NPYP01303 97 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 TRACP01848 142 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 RPL18AQ02543 176 aaKnown RBP2.88□□□□□ -1.95
FOXN3-210ENST00000555658 MRPL55Q7Z7F7 128 aaKnown RBP2.88□□□□□ -1.95
FOXN3-210ENST00000555658 LINC01561Q8N1V8 128 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 ANKRD29Q8N6D5 301 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 LINC00612Q8N6U2 182 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 PHLDA1Q8WV24 401 aaPredicted RBP2.88□□□□□ -1.95
FOXN3-210ENST00000555658 CHCHD1Q96BP2 118 aaKnown RBP2.88□□□□□ -1.95
FOXN3-210ENST00000555658 LINC01600Q96MT4 127 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 B9D2Q9BPU9 175 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 TM2D3Q9BRN9 247 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 C11orf68Q9H3H3 251 aaKnown RBP2.88□□□□□ -1.95
FOXN3-210ENST00000555658 HHLA3Q9XRX5 114 aa2.88□□□□□ -1.95
FOXN3-210ENST00000555658 TRBV7-3A0A075B6L6 115 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 IGLV5-45A0A087WSX0 123 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 TRAV13-1A0A0B4J241 112 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 A0A0J9YWU9 116 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 FAM240AA0A1B0GVK7 77 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 A0A1B0GWB2 263 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 SDHAF1A6NFY7 115 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 COX7CP15954 63 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 FCER1GP30273 86 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 IFI27P40305 119 aaPredicted RBP2.87□□□□□ -1.95
FOXN3-210ENST00000555658 LAGE3Q14657 143 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 RHOHQ15669 191 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 ORMDL2Q53FV1 153 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 LYRM7Q5U5X0 104 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 DAZ4Q86SG3 579 aaKnown RBP2.87□□□□□ -1.95
FOXN3-210ENST00000555658 TEN1Q86WV5 123 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 PRR15Q8IV56 129 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 Q8N8P6 123 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 SLC25A29Q8N8R3 303 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 RPL39LQ96EH5 51 aaKnown RBP2.87□□□□□ -1.95
FOXN3-210ENST00000555658 SMIM2Q9BVW6 85 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 DAZ3Q9NR90 486 aaKnown RBP2.87□□□□□ -1.95
FOXN3-210ENST00000555658 PRO0255Q9UI72 69 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 NBEAL2Q6ZNJ1 2754 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 NOTCH1P46531 2555 aa2.87□□□□□ -1.95
FOXN3-210ENST00000555658 NBEAL1Q6ZS30 2694 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 SMIM26A0A096LP01 95 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 TRBV27A0A0K0K1C4 114 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 LINC01549A6NIU2 74 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 I3L3M4 83 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 K7EQD1 137 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 HTN3P15516 51 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 POLR2KP53803 58 aaKnown RBP2.86□□□□□ -1.95
FOXN3-210ENST00000555658 CELA1Q9UNI1 258 aa2.86□□□□□ -1.95
FOXN3-210ENST00000555658 AGRNO00468 2067 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 DEFB131BA0A096LNP1 70 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 TRBV7-6A0A0J9YX20 115 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 LINC01546A6NGU7 62 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 IGLL5B9A064 214 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 LEPROTL1O95214 131 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 HBDP02042 147 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 PCP2Q8IVA1 136 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 CEND1Q8N111 149 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 FAM19A2Q8N3H0 131 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 C15orf53Q8NAA6 179 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 CHCHD5Q9BSY4 110 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 HIGD1BQ9P298 99 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
FOXN3-210ENST00000555658 IGLV2-18A0A075B6J9 118 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 TRAV10A0A0B4J240 114 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 IGHV1-24A0A0C4DH33 117 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 IGHV3-38A0A0C4DH36 116 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 A0A0J9YY99 117 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 H3BNG1 76 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 UBE2D3P61077 147 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 UBE2D2P62837 147 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 VSIG2Q96IQ7 327 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 SCGB3A1Q96QR1 104 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 OPRPNQ99935 248 aaPredicted RBP2.84□□□□□ -1.95
FOXN3-210ENST00000555658 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.95
FOXN3-210ENST00000555658 ICOSQ9Y6W8 199 aa2.84□□□□□ -1.95
FOXN3-210ENST00000555658 TRBV25-1A0A075B6N4 114 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 TRBV6-8A0A0A6YYG3 113 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 LOC100131303A0A0U1RQF7 123 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 H3BT86 120 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 UBE2L6O14933 153 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 TSHBP01222 138 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 IGKCP01834 107 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 MRPS36P82909 103 aaKnown RBP2.83□□□□□ -1.96
FOXN3-210ENST00000555658 LINC01545Q5VT33 79 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 C2orf66Q6UXQ4 117 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 DEFB104AQ8WTQ1 72 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 COPS9Q8WXC6 57 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms