RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 LY6G6CO95867 125 aa6.83□□□□□ -1.32
SRP54-208ENST00000555557 C10orf126Q8N4M7 172 aa6.83□□□□□ -1.32
SRP54-208ENST00000555557 A0A087WZ39 114 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 SMIM1B2RUZ4 78 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 E9PLD3 99 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 M0R2N4 97 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 HERVK_113P61574 105 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 PCP2Q8IVA1 136 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 TSPEAR-AS2P59090 65 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 C1orf43Q9BWL3 253 aa6.82□□□□□ -1.32
SRP54-208ENST00000555557 DNAH10Q8IVF4 4471 aa6.81□□□□□ -1.32
SRP54-208ENST00000555557 NBDYA0A0U1RRE5 68 aa6.81□□□□□ -1.32
SRP54-208ENST00000555557 COX7A2LO14548 114 aa6.81□□□□□ -1.32
SRP54-208ENST00000555557 GCSHP23434 173 aa6.81□□□□□ -1.32
SRP54-208ENST00000555557 MALP21145 153 aa6.8□□□□□ -1.32
SRP54-208ENST00000555557 WFDC2Q14508 124 aa6.8□□□□□ -1.32
SRP54-208ENST00000555557 MAPKAPK5-AS1Q8N8E1 139 aa6.8□□□□□ -1.32
SRP54-208ENST00000555557 A6NJY4 79 aa6.8□□□□□ -1.32
SRP54-208ENST00000555557 LEPROTO15243 131 aa6.8□□□□□ -1.32
SRP54-208ENST00000555557 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
SRP54-208ENST00000555557 TOMM7Q9P0U1 55 aa6.8□□□□□ -1.32
SRP54-208ENST00000555557 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
SRP54-208ENST00000555557 J3QQQ9 107 aa6.79□□□□□ -1.32
SRP54-208ENST00000555557 TAL2Q16559 108 aa6.79□□□□□ -1.32
SRP54-208ENST00000555557 TM2D2Q9BX73 214 aa6.79□□□□□ -1.32
SRP54-208ENST00000555557 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
SRP54-208ENST00000555557 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
SRP54-208ENST00000555557 CEND1Q8N111 149 aa6.78□□□□□ -1.32
SRP54-208ENST00000555557 FXYD2P54710 66 aa6.78□□□□□ -1.32
SRP54-208ENST00000555557 TTC32Q5I0X7 151 aa6.78□□□□□ -1.32
SRP54-208ENST00000555557 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
SRP54-208ENST00000555557 LINC00526Q96FQ7 95 aa6.78□□□□□ -1.32
SRP54-208ENST00000555557 HYDINQ4G0P3 5121 aa6.77□□□□□ -1.33
SRP54-208ENST00000555557 TSPAN13O95857 204 aa6.77□□□□□ -1.33
SRP54-208ENST00000555557 COX7B2Q8TF08 81 aa6.77□□□□□ -1.33
SRP54-208ENST00000555557 NHP2Q9NX24 153 aaKnown RBP6.77□□□□□ -1.33
SRP54-208ENST00000555557 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 ZNF815PA8K554 130 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 ETDBQ3ZM63 59 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 HIGD2BQ4VC39 106 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 RMI2Q96E14 147 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 LECT2O14960 151 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
SRP54-208ENST00000555557 K7ERJ3 54 aa6.75□□□□□ -1.33
SRP54-208ENST00000555557 KIAA0087Q14695 138 aa6.75□□□□□ -1.33
SRP54-208ENST00000555557 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
SRP54-208ENST00000555557 Q6ZR54 194 aa6.75□□□□□ -1.33
SRP54-208ENST00000555557 C6orf223Q8N319 242 aa6.75□□□□□ -1.33
SRP54-208ENST00000555557 C15orf56Q8N910 161 aa6.75□□□□□ -1.33
SRP54-208ENST00000555557 ZNF625Q96I27 306 aaPredicted RBP6.75□□□□□ -1.33
SRP54-208ENST00000555557 H3BMG7 143 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 PSCAO43653 123 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 APOMO95445 188 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 PRSS2P07478 247 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 SPAG11BQ08648 103 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 ERG28Q9UKR5 140 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 A0A1B0GWB2 263 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 Q8IZM0 81 aa6.74□□□□□ -1.33
SRP54-208ENST00000555557 USP17L23D6RBM5 183 aa6.73□□□□□ -1.33
SRP54-208ENST00000555557 NDUFA1O15239 70 aa6.72□□□□□ -1.33
SRP54-208ENST00000555557 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
SRP54-208ENST00000555557 Q6ZRN7 208 aaPredicted RBP6.72□□□□□ -1.33
SRP54-208ENST00000555557 A0A0J9YXY3 114 aa6.72□□□□□ -1.33
SRP54-208ENST00000555557 A0A0U1RRA0 63 aa6.72□□□□□ -1.33
SRP54-208ENST00000555557 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
SRP54-208ENST00000555557 C10orf25Q5T742 122 aa6.72□□□□□ -1.33
SRP54-208ENST00000555557 CDIP1Q9H305 208 aa6.72□□□□□ -1.33
SRP54-208ENST00000555557 DNAH6Q9C0G6 4158 aa6.71□□□□□ -1.33
SRP54-208ENST00000555557 UNQ6190/PRO20217Q6UXQ8 127 aa6.71□□□□□ -1.34
SRP54-208ENST00000555557 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
SRP54-208ENST00000555557 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
SRP54-208ENST00000555557 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
SRP54-208ENST00000555557 PGPEP1Q9NXJ5 209 aa6.7□□□□□ -1.34
SRP54-208ENST00000555557 EPPK1P58107 5090 aaKnown RBP6.7□□□□□ -1.34
SRP54-208ENST00000555557 C9orf116Q5BN46 136 aaPredicted RBP6.7□□□□□ -1.34
SRP54-208ENST00000555557 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
SRP54-208ENST00000555557 ANAPC13Q9BS18 74 aa6.7□□□□□ -1.34
SRP54-208ENST00000555557 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 SLPIP03973 132 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 MEIG1Q5JSS6 88 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 ADAMTSL4-AS1Q5T5F5 129 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 LYRM7Q5U5X0 104 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 DAND5Q8N907 189 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 PPDPFLQ8WWR9 84 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 CAMK2N2Q96S95 79 aa6.69□□□□□ -1.34
SRP54-208ENST00000555557 LRCOL1A6NCL2 159 aa6.68□□□□□ -1.34
SRP54-208ENST00000555557 PFN2P35080 140 aa6.68□□□□□ -1.34
SRP54-208ENST00000555557 HERV-K104P63124 156 aa6.68□□□□□ -1.34
SRP54-208ENST00000555557 Q6ZRU5 148 aa6.68□□□□□ -1.34
SRP54-208ENST00000555557 LITAFQ99732 161 aa6.68□□□□□ -1.34
SRP54-208ENST00000555557 DNAH17Q9UFH2 4485 aa6.68□□□□□ -1.34
SRP54-208ENST00000555557 LCE6AA0A183 80 aa6.68□□□□□ -1.34
SRP54-208ENST00000555557 CXCL5P42830 114 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms