RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 C14orf132Q9NPU4 83 aa11.59□□□□□ -0.55
XRCC3-209ENST00000554913 PAX4O43316 350 aa11.58□□□□□ -0.56
XRCC3-209ENST00000554913 LRRC75A-AS1Q8N1F1 130 aa11.58□□□□□ -0.56
XRCC3-209ENST00000554913 LECT2O14960 151 aa11.57□□□□□ -0.56
XRCC3-209ENST00000554913 OR13C6PQ8NH95 151 aa11.57□□□□□ -0.56
XRCC3-209ENST00000554913 H0YGX0 51 aa11.56□□□□□ -0.56
XRCC3-209ENST00000554913 LINC00959A0A1B0GUT2 108 aa11.56□□□□□ -0.56
XRCC3-209ENST00000554913 NOTCH2Q04721 2471 aa11.55□□□□□ -0.56
XRCC3-209ENST00000554913 SLPIP03973 132 aa11.55□□□□□ -0.56
XRCC3-209ENST00000554913 CXCL5P42830 114 aa11.55□□□□□ -0.56
XRCC3-209ENST00000554913 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
XRCC3-209ENST00000554913 IGLV1-51P01701 117 aa11.54□□□□□ -0.56
XRCC3-209ENST00000554913 C6orf226Q5I0X4 101 aa11.54□□□□□ -0.56
XRCC3-209ENST00000554913 C3orf22Q8N5N4 141 aa11.54□□□□□ -0.56
XRCC3-209ENST00000554913 DEFB130BP0DP73 79 aa11.54□□□□□ -0.56
XRCC3-209ENST00000554913 DEFB130AP0DP74 79 aa11.54□□□□□ -0.56
XRCC3-209ENST00000554913 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
XRCC3-209ENST00000554913 XCL1P47992 114 aa11.53□□□□□ -0.56
XRCC3-209ENST00000554913 C9orf153Q5TBE3 101 aa11.53□□□□□ -0.56
XRCC3-209ENST00000554913 LINC01006Q8NI28 216 aa11.53□□□□□ -0.56
XRCC3-209ENST00000554913 NCR3O14931 201 aa11.53□□□□□ -0.56
XRCC3-209ENST00000554913 OBSCN-AS1Q96MR7 158 aa11.53□□□□□ -0.56
XRCC3-209ENST00000554913 TMEM126AQ9H061 195 aa11.53□□□□□ -0.56
XRCC3-209ENST00000554913 CLPSL2Q6UWE3 100 aa11.52□□□□□ -0.57
XRCC3-209ENST00000554913 LINC00846Q9NV44 126 aa11.52□□□□□ -0.57
XRCC3-209ENST00000554913 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
XRCC3-209ENST00000554913 J3QKU1 62 aa11.51□□□□□ -0.57
XRCC3-209ENST00000554913 UQCRQO14949 82 aa11.51□□□□□ -0.57
XRCC3-209ENST00000554913 IGKV3D-7A0A0C4DH55 119 aa11.5□□□□□ -0.57
XRCC3-209ENST00000554913 GYPEP15421 78 aa11.49□□□□□ -0.57
XRCC3-209ENST00000554913 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
XRCC3-209ENST00000554913 LY6G6DO95868 133 aa11.49□□□□□ -0.57
XRCC3-209ENST00000554913 LINC00526Q96FQ7 95 aa11.49□□□□□ -0.57
XRCC3-209ENST00000554913 HIST1H4AP62805 103 aaKnown RBP11.48□□□□□ -0.57
XRCC3-209ENST00000554913 A0A096LPF7 62 aa11.48□□□□□ -0.57
XRCC3-209ENST00000554913 NBEAL2Q6ZNJ1 2754 aa11.48□□□□□ -0.57
XRCC3-209ENST00000554913 SS18Q15532 418 aa11.47□□□□□ -0.57
XRCC3-209ENST00000554913 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
XRCC3-209ENST00000554913 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
XRCC3-209ENST00000554913 COX7CP15954 63 aa11.46□□□□□ -0.57
XRCC3-209ENST00000554913 ORMDL1Q9P0S3 153 aa11.46□□□□□ -0.57
XRCC3-209ENST00000554913 NANOS2P60321 138 aaKnown RBP11.45□□□□□ -0.58
XRCC3-209ENST00000554913 KRTAP1-1Q07627 177 aa11.45□□□□□ -0.58
XRCC3-209ENST00000554913 Q8IZM0 81 aa11.45□□□□□ -0.58
XRCC3-209ENST00000554913 A0A087WVE0 104 aa11.44□□□□□ -0.58
XRCC3-209ENST00000554913 Q6JHZ5 121 aa11.44□□□□□ -0.58
XRCC3-209ENST00000554913 A0A1B0GUV1 79 aa11.44□□□□□ -0.58
XRCC3-209ENST00000554913 KIR2DL5BQ8NHK3 375 aa11.44□□□□□ -0.58
XRCC3-209ENST00000554913 ATOX1O00244 68 aa11.43□□□□□ -0.58
XRCC3-209ENST00000554913 C16orf95Q9H693 158 aa11.43□□□□□ -0.58
XRCC3-209ENST00000554913 LINC00612Q8N6U2 182 aa11.42□□□□□ -0.58
XRCC3-209ENST00000554913 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
XRCC3-209ENST00000554913 RNASE1P07998 156 aaKnown RBP11.41□□□□□ -0.58
XRCC3-209ENST00000554913 Q8N3U1 123 aa11.41□□□□□ -0.58
XRCC3-209ENST00000554913 KIAA0087Q14695 138 aa11.4□□□□□ -0.58
XRCC3-209ENST00000554913 C9orf116Q5BN46 136 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-209ENST00000554913 LINC00269Q8N2A0 174 aa11.4□□□□□ -0.58
XRCC3-209ENST00000554913 Q8N814 137 aa11.4□□□□□ -0.58
XRCC3-209ENST00000554913 A0A1B0GX51 115 aa11.4□□□□□ -0.59
XRCC3-209ENST00000554913 CCKP06307 115 aa11.4□□□□□ -0.59
XRCC3-209ENST00000554913 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.59
XRCC3-209ENST00000554913 LINC00167Q96N53 147 aa11.4□□□□□ -0.59
XRCC3-209ENST00000554913 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
XRCC3-209ENST00000554913 CYSTM1Q9H1C7 97 aa11.39□□□□□ -0.59
XRCC3-209ENST00000554913 hADV29S1A0JD25 119 aa11.39□□□□□ -0.59
XRCC3-209ENST00000554913 PRO0255Q9UI72 69 aa11.39□□□□□ -0.59
XRCC3-209ENST00000554913 X6R8D5 127 aa11.39□□□□□ -0.59
XRCC3-209ENST00000554913 CRYGAP11844 174 aa11.38□□□□□ -0.59
XRCC3-209ENST00000554913 Q8NDZ9 215 aa11.37□□□□□ -0.59
XRCC3-209ENST00000554913 HIVEP2P31629 2446 aa11.36□□□□□ -0.59
XRCC3-209ENST00000554913 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
XRCC3-209ENST00000554913 CHCHD10Q8WYQ3 142 aaPredicted RBP11.36□□□□□ -0.59
XRCC3-209ENST00000554913 SMR3AQ99954 134 aa11.36□□□□□ -0.59
XRCC3-209ENST00000554913 NDUFC2O95298 119 aa11.35□□□□□ -0.59
XRCC3-209ENST00000554913 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
XRCC3-209ENST00000554913 USP17L23D6RBM5 183 aa11.35□□□□□ -0.59
XRCC3-209ENST00000554913 DEFB4AO15263 64 aa11.35□□□□□ -0.59
XRCC3-209ENST00000554913 JMJD7-PLA2G4BH0Y9G9 81 aa11.34□□□□□ -0.59
XRCC3-209ENST00000554913 ANGP03950 147 aaKnown RBP11.34□□□□□ -0.59
XRCC3-209ENST00000554913 C6orf99Q4VX62 202 aa11.34□□□□□ -0.59
XRCC3-209ENST00000554913 TMEM256-PLSCR3K7ERE1 68 aa11.34□□□□□ -0.59
XRCC3-209ENST00000554913 COX17Q14061 63 aa11.34□□□□□ -0.59
XRCC3-209ENST00000554913 SERP2Q8N6R1 65 aa11.33□□□□□ -0.6
XRCC3-209ENST00000554913 WFDC9Q8NEX5 89 aa11.33□□□□□ -0.6
XRCC3-209ENST00000554913 HILS1P60008 231 aa11.33□□□□□ -0.6
XRCC3-209ENST00000554913 REG3AQ06141 175 aa11.33□□□□□ -0.6
XRCC3-209ENST00000554913 KRTAP10-3P60369 221 aa11.32□□□□□ -0.6
XRCC3-209ENST00000554913 LINC00482Q8N8I6 264 aa11.32□□□□□ -0.6
XRCC3-209ENST00000554913 IGHV4-28A0A0C4DH34 117 aa11.31□□□□□ -0.6
XRCC3-209ENST00000554913 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
XRCC3-209ENST00000554913 C6orf223Q8N319 242 aa11.3□□□□□ -0.6
XRCC3-209ENST00000554913 UPK3BQ9BT76 320 aa11.3□□□□□ -0.6
XRCC3-209ENST00000554913 HIVEP1P15822 2718 aa11.3□□□□□ -0.6
XRCC3-209ENST00000554913 VWFP04275 2813 aa11.3□□□□□ -0.6
XRCC3-209ENST00000554913 S100A7L2Q5SY68 101 aa11.29□□□□□ -0.6
XRCC3-209ENST00000554913 NSD1Q96L73 2696 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-209ENST00000554913 SMIM9A6NGZ8 99 aa11.29□□□□□ -0.6
XRCC3-209ENST00000554913 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
XRCC3-209ENST00000554913 FAM19A1Q7Z5A9 133 aa11.28□□□□□ -0.6
XRCC3-209ENST00000554913 SPATA3Q8NHX4 192 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms