RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TIRAPP58753 221 aa11.91□□□□□ -0.5
PCNX1-209ENST00000554879 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
PCNX1-209ENST00000554879 Q6ZSN1 163 aa11.9□□□□□ -0.5
PCNX1-209ENST00000554879 SBSPONQ8IVN8 264 aa11.9□□□□□ -0.5
PCNX1-209ENST00000554879 COPS9Q8WXC6 57 aa11.9□□□□□ -0.5
PCNX1-209ENST00000554879 SNURFQ9Y675 71 aa11.9□□□□□ -0.5
PCNX1-209ENST00000554879 TRBV27A0A0K0K1C4 114 aa11.9□□□□□ -0.5
PCNX1-209ENST00000554879 KIF25-AS1Q9Y6Z4 181 aa11.9□□□□□ -0.5
PCNX1-209ENST00000554879 LST1O00453 97 aa11.89□□□□□ -0.51
PCNX1-209ENST00000554879 LINC00158P58513 81 aa11.89□□□□□ -0.51
PCNX1-209ENST00000554879 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 MALP21145 153 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 BEAN1Q3B7T3 259 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 RETNQ9HD89 108 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 Q9UF83 564 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 LINC00467Q9BRT7 94 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 IGLV2-18A0A075B6J9 118 aa11.88□□□□□ -0.51
PCNX1-209ENST00000554879 TSHBP01222 138 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 KRTAP24-1Q3LI83 254 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 LINC00315P59091 139 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 Q9H8V8 135 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 TRBV6-5A0A0K0K1A5 114 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 LINC00336Q6ZUF6 198 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 ZNF575Q86XF7 245 aa11.87□□□□□ -0.51
PCNX1-209ENST00000554879 TMEM223A0PJW6 202 aa11.85□□□□□ -0.51
PCNX1-209ENST00000554879 RPS28P62857 69 aaKnown RBP11.85□□□□□ -0.51
PCNX1-209ENST00000554879 C11orf72Q8NBR9 251 aa11.85□□□□□ -0.51
PCNX1-209ENST00000554879 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
PCNX1-209ENST00000554879 UBL5Q9BZL1 73 aa11.85□□□□□ -0.51
PCNX1-209ENST00000554879 VPS13CQ709C8 3753 aa11.84□□□□□ -0.51
PCNX1-209ENST00000554879 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
PCNX1-209ENST00000554879 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
PCNX1-209ENST00000554879 CRYGAP11844 174 aa11.84□□□□□ -0.51
PCNX1-209ENST00000554879 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
PCNX1-209ENST00000554879 SPATA3Q8NHX4 192 aa11.83□□□□□ -0.52
PCNX1-209ENST00000554879 PRO0255Q9UI72 69 aa11.83□□□□□ -0.52
PCNX1-209ENST00000554879 TIMM17BO60830 172 aa11.83□□□□□ -0.52
PCNX1-209ENST00000554879 IGLV4-3A0A075B6K6 122 aa11.82□□□□□ -0.52
PCNX1-209ENST00000554879 ANGP03950 147 aaKnown RBP11.82□□□□□ -0.52
PCNX1-209ENST00000554879 PDZD2O15018 2839 aa11.82□□□□□ -0.52
PCNX1-209ENST00000554879 SLPIP03973 132 aa11.81□□□□□ -0.52
PCNX1-209ENST00000554879 IGLV4-69A0A075B6H9 119 aa11.81□□□□□ -0.52
PCNX1-209ENST00000554879 NCR3O14931 201 aa11.81□□□□□ -0.52
PCNX1-209ENST00000554879 MIAQ16674 131 aa11.81□□□□□ -0.52
PCNX1-209ENST00000554879 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
PCNX1-209ENST00000554879 COX7A2LO14548 114 aa11.8□□□□□ -0.52
PCNX1-209ENST00000554879 LECT2O14960 151 aa11.8□□□□□ -0.52
PCNX1-209ENST00000554879 POM121L12Q8N7R1 296 aa11.8□□□□□ -0.52
PCNX1-209ENST00000554879 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
PCNX1-209ENST00000554879 XCL1P47992 114 aa11.8□□□□□ -0.52
PCNX1-209ENST00000554879 VSIG2Q96IQ7 327 aa11.8□□□□□ -0.52
PCNX1-209ENST00000554879 CUBNO60494 3623 aa11.79□□□□□ -0.52
PCNX1-209ENST00000554879 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
PCNX1-209ENST00000554879 C5orf38Q86SI9 138 aa11.79□□□□□ -0.52
PCNX1-209ENST00000554879 SMCR5Q8TEV8 140 aa11.79□□□□□ -0.52
PCNX1-209ENST00000554879 WIPF1O43516 503 aa11.78□□□□□ -0.52
PCNX1-209ENST00000554879 CXCL5P42830 114 aa11.78□□□□□ -0.52
PCNX1-209ENST00000554879 IGIPA6NJ69 53 aa11.77□□□□□ -0.52
PCNX1-209ENST00000554879 SS18Q15532 418 aa11.77□□□□□ -0.53
PCNX1-209ENST00000554879 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.53
PCNX1-209ENST00000554879 TRBV6-4A0A1B0GX49 114 aa11.76□□□□□ -0.53
PCNX1-209ENST00000554879 LYRM9A8MSI8 78 aa11.76□□□□□ -0.53
PCNX1-209ENST00000554879 PIK3CD-AS1Q5SR53 167 aa11.76□□□□□ -0.53
PCNX1-209ENST00000554879 NDUFC2-KCTD14E9PQ53 114 aa11.75□□□□□ -0.53
PCNX1-209ENST00000554879 OTOGQ6ZRI0 2925 aa11.75□□□□□ -0.53
PCNX1-209ENST00000554879 IGHV1-58A0A0C4DH39 117 aa11.75□□□□□ -0.53
PCNX1-209ENST00000554879 MIFP14174 115 aa11.75□□□□□ -0.53
PCNX1-209ENST00000554879 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
PCNX1-209ENST00000554879 SMIM26A0A096LP01 95 aa11.74□□□□□ -0.53
PCNX1-209ENST00000554879 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
PCNX1-209ENST00000554879 CDKN2A-AS1Q9UH64 79 aa11.74□□□□□ -0.53
PCNX1-209ENST00000554879 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
PCNX1-209ENST00000554879 NBEAL1Q6ZS30 2694 aa11.73□□□□□ -0.53
PCNX1-209ENST00000554879 F8WDY8 70 aa11.73□□□□□ -0.53
PCNX1-209ENST00000554879 IL17DQ8TAD2 202 aa11.73□□□□□ -0.53
PCNX1-209ENST00000554879 F8WEM9 126 aa11.73□□□□□ -0.53
PCNX1-209ENST00000554879 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
PCNX1-209ENST00000554879 A8MTW9 85 aa11.72□□□□□ -0.53
PCNX1-209ENST00000554879 GIG44P09565 113 aaPredicted RBP11.72□□□□□ -0.53
PCNX1-209ENST00000554879 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
PCNX1-209ENST00000554879 FHL2Q14192 279 aa11.71□□□□□ -0.53
PCNX1-209ENST00000554879 CYSTM1Q9H1C7 97 aa11.71□□□□□ -0.53
PCNX1-209ENST00000554879 C2orf48Q96LS8 159 aa11.71□□□□□ -0.54
PCNX1-209ENST00000554879 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.54
PCNX1-209ENST00000554879 LINC00846Q9NV44 126 aa11.71□□□□□ -0.54
PCNX1-209ENST00000554879 FAM19A1Q7Z5A9 133 aa11.7□□□□□ -0.54
PCNX1-209ENST00000554879 SERP1Q9Y6X1 66 aa11.7□□□□□ -0.54
PCNX1-209ENST00000554879 LINC00308Q8TCZ7 52 aa11.69□□□□□ -0.54
PCNX1-209ENST00000554879 OVOL2Q9BRP0 275 aa11.69□□□□□ -0.54
PCNX1-209ENST00000554879 TRAV13-2A0A0B4J235 113 aa11.69□□□□□ -0.54
PCNX1-209ENST00000554879 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
PCNX1-209ENST00000554879 C11orf45Q8TAV5 145 aa11.68□□□□□ -0.54
PCNX1-209ENST00000554879 SND1-IT1Q9HBX3 110 aa11.68□□□□□ -0.54
PCNX1-209ENST00000554879 KLK12Q9UKR0 248 aa11.68□□□□□ -0.54
PCNX1-209ENST00000554879 ORMDL1Q9P0S3 153 aa11.68□□□□□ -0.54
PCNX1-209ENST00000554879 X6R8D5 127 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms