RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 NCOA3Q9Y6Q9 1424 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 LINC00694P0DN24 101 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 DEFB109BQ30KR1 87 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 ZNF818PQ6ZRF7 136 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 Q6ZUT4 128 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 DPH3P1Q9H4G8 78 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 KDM5DQ9BY66 1539 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 MUC22E2RYF6 1773 aaPredicted RBP-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 ARHGEF10O15013 1369 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 ABCA6Q8N139 1617 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 DOCK1Q14185 1865 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 ARHGAP35Q9NRY4 1499 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 C4AP0C0L4 1744 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 C4BP0C0L5 1744 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 TIAM1Q13009 1591 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 ITSN2Q9NZM3 1697 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 NFAT5O94916 1531 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 DCAF1Q9Y4B6 1507 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 A6NIN4 97 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 APOC4-APOC2K7ER74 178 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 M0R129 80 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 UBE2G1P62253 170 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 MT1XP80297 61 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 RPL7L1Q6DKI1 246 aaKnown RBP-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 CTAGE3PQ8IX95 158 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 PYDC1Q8WXC3 89 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 MT1LQ93083 61 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 CDK5RAP2Q96SN8 1893 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 SHROOM2Q13796 1616 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 ANKRD30AQ9BXX3 1397 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 LRRC37AA6NMS7 1700 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 ARAP2Q8WZ64 1704 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 PARP4Q9UKK3 1724 aaKnown RBP-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 MLH3Q9UHC1 1453 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 NRXN1Q9ULB1 1477 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 WDR7Q9Y4E6 1490 aa-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 EIF4G3O43432 1585 aaKnown RBP-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 THOC2Q8NI27 1593 aaKnown RBP-0.36□□□□□ -2.47
SCFD1-214ENST00000554819 KDM3BQ7LBC6 1761 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 PRDM2Q13029 1718 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 QSER1Q2KHR3 1735 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 TNFP01375 233 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 PRM1P04553 51 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 IL5P05113 134 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 PIPP12273 146 aaPredicted RBP-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 COX6B1P14854 86 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 CBLN1P23435 193 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 CKS1BP61024 79 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 RPS29P62273 56 aaKnown RBP-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 CCL8P80075 99 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 SCIMPQ6UWF3 145 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 BAGE3Q86Y29 109 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 SMIM3Q9BZL3 60 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 GSKIPQ9P0R6 139 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 PLEKHH2Q8IVE3 1493 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 DIP2AQ14689 1571 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 CDC42BPGQ6DT37 1551 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 C5P01031 1676 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 KIF21AQ7Z4S6 1674 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 DOCK11Q5JSL3 2073 aa-0.37□□□□□ -2.47
SCFD1-214ENST00000554819 FHAD1B1AJZ9 1412 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 PRDM15P57071 1507 aaPredicted RBP-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 MAGI3Q5TCQ9 1506 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 NRXN3Q9Y4C0 1643 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 XRN1Q8IZH2 1706 aaKnown RBP-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 AKAP11Q9UKA4 1901 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 TRAV22A0A0B4J277 110 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 SPAARA0A1B0GVQ0 90 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 RRAS2P62070 204 aaPredicted RBP-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 ALX1Q15699 326 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 CFAP126Q5VTH2 177 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 PSMG3Q9BT73 122 aaPredicted RBP-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 ROBO1Q9Y6N7 1651 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 NUP188Q5SRE5 1749 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 PKD1L3Q7Z443 1732 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 IFT172Q9UG01 1749 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 CASKIN1Q8WXD9 1431 aa-0.38□□□□□ -2.47
SCFD1-214ENST00000554819 SCN11AQ9UI33 1791 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 RB1CC1Q8TDY2 1594 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 ATP10BO94823 1461 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 MYOM2P54296 1465 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 IFT140Q96RY7 1462 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 FAM92AA1XBS5 289 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 J3QR89 54 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 K7EQZ3 153 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 M0R2Z0 102 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 NPFFO15130 113 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 DEFB4AO15263 64 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 ARPC5O15511 151 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 NDUFB6O95139 128 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 SMIM6P0DI80 62 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 SPRR1AP35321 89 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 CCL18P55774 89 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 DR1Q01658 176 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 SPAG11BQ08648 103 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 KRTAP19-5Q3LI72 72 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 AKAP14Q86UN6 197 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 Q8IZM0 81 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 FDCSPQ8NFU4 85 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms