RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-208	ENST00000554698	TMEM170B	Q5T4T1	132 aa		13.71	□□□□□ -0.22
SDR39U1-208	ENST00000554698	COX7B2	Q8TF08	81 aa		13.7	□□□□□ -0.22
SDR39U1-208	ENST00000554698	C6orf48	Q9UBA6	75 aa		13.7	□□□□□ -0.22
SDR39U1-208	ENST00000554698	CKS1B	P61024	79 aa		13.69	□□□□□ -0.22
SDR39U1-208	ENST00000554698	HAMP	P81172	84 aa		13.69	□□□□□ -0.22
SDR39U1-208	ENST00000554698	DNAH8	Q96JB1	4490 aa		13.68	□□□□□ -0.22
SDR39U1-208	ENST00000554698	TRBV30	A0A0K0K1B3	111 aa		13.68	□□□□□ -0.22
SDR39U1-208	ENST00000554698	SCX	Q7RTU7	201 aa		13.68	□□□□□ -0.22
SDR39U1-208	ENST00000554698		A0A096LNI7	61 aa		13.67	□□□□□ -0.22
SDR39U1-208	ENST00000554698	LOC107984640	A0A0U1RRK4	108 aa		13.67	□□□□□ -0.22
SDR39U1-208	ENST00000554698	CHTF8	P0CG12	524 aa		13.67	□□□□□ -0.22
SDR39U1-208	ENST00000554698	PLN	P26678	52 aa		13.67	□□□□□ -0.22
SDR39U1-208	ENST00000554698	CXCL5	P42830	114 aa		13.67	□□□□□ -0.22
SDR39U1-208	ENST00000554698	SPACA4	Q8TDM5	124 aa		13.67	□□□□□ -0.22
SDR39U1-208	ENST00000554698	TMEM223	A0PJW6	202 aa		13.66	□□□□□ -0.22
SDR39U1-208	ENST00000554698	SYS1-DBNDD2	H3BUS1	97 aa		13.66	□□□□□ -0.22
SDR39U1-208	ENST00000554698	CIRBP-AS1	Q8TBR5	109 aa		13.66	□□□□□ -0.22
SDR39U1-208	ENST00000554698	HSPG2	P98160	4391 aa		13.66	□□□□□ -0.22
SDR39U1-208	ENST00000554698	HERC2	O95714	4834 aa		13.65	□□□□□ -0.22
SDR39U1-208	ENST00000554698	DPM2	O94777	84 aa		13.64	□□□□□ -0.23
SDR39U1-208	ENST00000554698	TLX1NB	P0CAT3	122 aa		13.64	□□□□□ -0.23
SDR39U1-208	ENST00000554698	PMCHL2	Q9BQD1	86 aa		13.64	□□□□□ -0.23
SDR39U1-208	ENST00000554698	LINC00474	Q9P2X8	69 aa		13.64	□□□□□ -0.23
SDR39U1-208	ENST00000554698	IGKV2-24	A0A0C4DH68	120 aa		13.63	□□□□□ -0.23
SDR39U1-208	ENST00000554698	PTTG1IP	P53801	180 aa		13.63	□□□□□ -0.23
SDR39U1-208	ENST00000554698	HIST3H2BB	Q8N257	126 aa		13.62	□□□□□ -0.23
SDR39U1-208	ENST00000554698	C3orf79	P0CE67	100 aa		13.61	□□□□□ -0.23
SDR39U1-208	ENST00000554698	C9orf116	Q5BN46	136 aa	Predicted RBP	13.61	□□□□□ -0.23
SDR39U1-208	ENST00000554698	PET117	Q6UWS5	81 aa		13.61	□□□□□ -0.23
SDR39U1-208	ENST00000554698	KRTAP17-1	Q9BYP8	105 aa		13.61	□□□□□ -0.23
SDR39U1-208	ENST00000554698	IGKC	P01834	107 aa		13.6	□□□□□ -0.23
SDR39U1-208	ENST00000554698	S100A6	P06703	90 aa		13.6	□□□□□ -0.23
SDR39U1-208	ENST00000554698	RPL18A	Q02543	176 aa	Known RBP	13.6	□□□□□ -0.23
SDR39U1-208	ENST00000554698	GAGE2B	Q13066	116 aa		13.6	□□□□□ -0.23
SDR39U1-208	ENST00000554698	MAJIN	Q3KP22	176 aa		13.6	□□□□□ -0.23
SDR39U1-208	ENST00000554698	LINC01545	Q5VT33	79 aa		13.6	□□□□□ -0.23
SDR39U1-208	ENST00000554698		A0A087WYN8	130 aa		13.59	□□□□□ -0.23
SDR39U1-208	ENST00000554698		Q6ZRP5	223 aa		13.59	□□□□□ -0.23
SDR39U1-208	ENST00000554698	NDUFC2-KCTD14	E9PQ53	114 aa		13.58	□□□□□ -0.23
SDR39U1-208	ENST00000554698		Q8N1X5	172 aa		13.58	□□□□□ -0.23
SDR39U1-208	ENST00000554698	DPH3	Q96FX2	82 aa		13.58	□□□□□ -0.23
SDR39U1-208	ENST00000554698	PLAC8	Q9NZF1	115 aa		13.58	□□□□□ -0.23
SDR39U1-208	ENST00000554698	KRTDAP	P60985	99 aa		13.58	□□□□□ -0.24
SDR39U1-208	ENST00000554698	HIST1H2BL	Q99880	126 aa		13.58	□□□□□ -0.24
SDR39U1-208	ENST00000554698	SMR3B	P02814	79 aa	Predicted RBP	13.57	□□□□□ -0.24
SDR39U1-208	ENST00000554698	S100A2	P29034	98 aa		13.56	□□□□□ -0.24
SDR39U1-208	ENST00000554698	SFTA2	Q6UW10	78 aa		13.56	□□□□□ -0.24
SDR39U1-208	ENST00000554698	STPG4	Q8N801	248 aa		13.56	□□□□□ -0.24
SDR39U1-208	ENST00000554698	ZNF625	Q96I27	306 aa	Predicted RBP	13.56	□□□□□ -0.24
SDR39U1-208	ENST00000554698	SNRPE	P62304	92 aa	Known RBP	13.55	□□□□□ -0.24
SDR39U1-208	ENST00000554698	C5orf52	A6NGY3	159 aa		13.53	□□□□□ -0.24
SDR39U1-208	ENST00000554698	EPM2A	B3EWF7	344 aa		13.53	□□□□□ -0.24
SDR39U1-208	ENST00000554698	HERVK_113	P61574	105 aa		13.53	□□□□□ -0.24
SDR39U1-208	ENST00000554698	GAGE2E	Q4V326	116 aa		13.53	□□□□□ -0.24
SDR39U1-208	ENST00000554698	GAGE2D	Q9UEU5	116 aa		13.53	□□□□□ -0.24
SDR39U1-208	ENST00000554698	LEPROT	O15243	131 aa		13.51	□□□□□ -0.25
SDR39U1-208	ENST00000554698	LINC00528	Q8N1L1	170 aa		13.51	□□□□□ -0.25
SDR39U1-208	ENST00000554698	C20orf202	A1L168	122 aa		13.5	□□□□□ -0.25
SDR39U1-208	ENST00000554698	PLEKHB2	Q96CS7	222 aa		13.5	□□□□□ -0.25
SDR39U1-208	ENST00000554698		A0A1W2PNN7	141 aa		13.49	□□□□□ -0.25
SDR39U1-208	ENST00000554698	TSPEAR-AS2	P59090	65 aa		13.49	□□□□□ -0.25
SDR39U1-208	ENST00000554698	C9orf129	Q5T035	196 aa	Known RBP	13.48	□□□□□ -0.25
SDR39U1-208	ENST00000554698	ERG28	Q9UKR5	140 aa		13.48	□□□□□ -0.25
SDR39U1-208	ENST00000554698		E9PLD3	99 aa		13.47	□□□□□ -0.25
SDR39U1-208	ENST00000554698	FAM229A	H3BQW9	127 aa		13.47	□□□□□ -0.25
SDR39U1-208	ENST00000554698		J3QQQ9	107 aa		13.47	□□□□□ -0.25
SDR39U1-208	ENST00000554698	COX17	Q14061	63 aa		13.47	□□□□□ -0.25
SDR39U1-208	ENST00000554698		Q5VSD8	79 aa		13.47	□□□□□ -0.25
SDR39U1-208	ENST00000554698	NDUFA12	Q9UI09	145 aa		13.47	□□□□□ -0.25
SDR39U1-208	ENST00000554698	KRTAP4-5	Q9BYR2	181 aa		13.46	□□□□□ -0.25
SDR39U1-208	ENST00000554698	FAT1	Q14517	4588 aa		13.46	□□□□□ -0.25
SDR39U1-208	ENST00000554698	FAM168B	A1KXE4	195 aa		13.45	□□□□□ -0.26
SDR39U1-208	ENST00000554698	PFN2	P35080	140 aa		13.45	□□□□□ -0.26
SDR39U1-208	ENST00000554698	HERV-K104	P63124	156 aa		13.45	□□□□□ -0.26
SDR39U1-208	ENST00000554698	XAGE1A	Q9HD64	81 aa		13.45	□□□□□ -0.26
SDR39U1-208	ENST00000554698	MYMX	A0A1B0GTQ4	84 aa		13.45	□□□□□ -0.26
SDR39U1-208	ENST00000554698	AKR1D1	P51857	326 aa		13.45	□□□□□ -0.26
SDR39U1-208	ENST00000554698	KRTAP7-1	Q8IUC3	87 aa		13.44	□□□□□ -0.26
SDR39U1-208	ENST00000554698	LGALS3	P17931	250 aa	Known RBP	13.43	□□□□□ -0.26
SDR39U1-208	ENST00000554698	NMU	P48645	174 aa		13.43	□□□□□ -0.26
SDR39U1-208	ENST00000554698	SRRM2	Q9UQ35	2752 aa	Known RBP	13.42	□□□□□ -0.26
SDR39U1-208	ENST00000554698	PLA2G1B	P04054	148 aa	Known RBP	13.41	□□□□□ -0.26
SDR39U1-208	ENST00000554698	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.41	□□□□□ -0.26
SDR39U1-208	ENST00000554698	C7orf33	Q8WU49	177 aa		13.41	□□□□□ -0.26
SDR39U1-208	ENST00000554698	KRTAP10-4	P60372	401 aa	Predicted RBP	13.4	□□□□□ -0.26
SDR39U1-208	ENST00000554698	ATOH7	Q8N100	152 aa		13.4	□□□□□ -0.26
SDR39U1-208	ENST00000554698	SND1-IT1	Q9HBX3	110 aa		13.39	□□□□□ -0.27
SDR39U1-208	ENST00000554698	IGKV2D-26	A0A0A0MRZ7	120 aa		13.38	□□□□□ -0.27
SDR39U1-208	ENST00000554698	LINC00587	B1AMM8	73 aa		13.38	□□□□□ -0.27
SDR39U1-208	ENST00000554698	LINC00158	P58513	81 aa		13.38	□□□□□ -0.27
SDR39U1-208	ENST00000554698	SERTAD4-AS1	Q5TG53	156 aa		13.38	□□□□□ -0.27
SDR39U1-208	ENST00000554698	SMIM13	P0DJ93	91 aa		13.37	□□□□□ -0.27
SDR39U1-208	ENST00000554698	RPL37A	P61513	92 aa	Known RBP	13.37	□□□□□ -0.27
SDR39U1-208	ENST00000554698	MEIG1	Q5JSS6	88 aa		13.37	□□□□□ -0.27
SDR39U1-208	ENST00000554698	PHF5A	Q7RTV0	110 aa	Known RBP	13.37	□□□□□ -0.27
SDR39U1-208	ENST00000554698	PLA2G2D	Q9UNK4	145 aa		13.37	□□□□□ -0.27
SDR39U1-208	ENST00000554698		A0A0U1RRA0	63 aa		13.35	□□□□□ -0.27
SDR39U1-208	ENST00000554698		M0QXV9	152 aa		13.35	□□□□□ -0.27
SDR39U1-208	ENST00000554698	ANKRD39	Q53RE8	183 aa		13.35	□□□□□ -0.27
SDR39U1-208	ENST00000554698	TMA7	Q9Y2S6	64 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms