RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 LINC00337Q8N6G1 96 aa2.77□□□□□ -1.97
ATXN3-229ENST00000554672 PPDPFQ9H3Y8 114 aa2.77□□□□□ -1.97
ATXN3-229ENST00000554672 OSTCQ9NRP0 149 aa2.77□□□□□ -1.97
ATXN3-229ENST00000554672 CSDC2Q9Y534 153 aaKnown RBP2.77□□□□□ -1.97
ATXN3-229ENST00000554672 TRAV13-1A0A0B4J241 112 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 A8MWL6 223 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 SRP19P09132 144 aaKnown RBP2.76□□□□□ -1.97
ATXN3-229ENST00000554672 RPL28P46779 137 aaKnown RBP2.76□□□□□ -1.97
ATXN3-229ENST00000554672 POLR2KP53803 58 aaKnown RBP2.76□□□□□ -1.97
ATXN3-229ENST00000554672 RPL24P83731 157 aaKnown RBP2.76□□□□□ -1.97
ATXN3-229ENST00000554672 FAM74A3Q4VXF1 159 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 LBHQ53QV2 105 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-229ENST00000554672 ALKAL2Q6UX46 152 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 LINC01551Q86U37 167 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 TMEM191AQ9H0A3 160 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 ST20Q9HBF5 79 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 C6orf48Q9UBA6 75 aa2.76□□□□□ -1.97
ATXN3-229ENST00000554672 TRBV27A0A0K0K1C4 114 aa2.75□□□□□ -1.97
ATXN3-229ENST00000554672 C7orf77A4D0Y5 90 aa2.75□□□□□ -1.97
ATXN3-229ENST00000554672 RPL32P62910 135 aaKnown RBP2.75□□□□□ -1.97
ATXN3-229ENST00000554672 LINC00242Q5T6M2 205 aa2.75□□□□□ -1.97
ATXN3-229ENST00000554672 ORAOV1Q8WV07 137 aa2.75□□□□□ -1.97
ATXN3-229ENST00000554672 RNASE7Q9H1E1 156 aaKnown RBP2.75□□□□□ -1.97
ATXN3-229ENST00000554672 TMEM242Q9NWH2 141 aa2.75□□□□□ -1.97
ATXN3-229ENST00000554672 ANAPC11Q9NYG5 84 aa2.75□□□□□ -1.97
ATXN3-229ENST00000554672 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
ATXN3-229ENST00000554672 TRBV24-1A0A075B6N3 115 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 IGKV2D-26A0A0A0MRZ7 120 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 IGHV3OR16-9A0A0B4J2B5 98 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 A0A1B0GUT8 65 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 SMIM27A0A1W2PRY6 76 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 HIGD1CA8MV81 97 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 BCE1O60756 84 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 FAM229BQ4G0N7 80 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 C9orf129Q5T035 196 aaKnown RBP2.74□□□□□ -1.97
ATXN3-229ENST00000554672 FP248Q71RG6 208 aaPredicted RBP2.74□□□□□ -1.97
ATXN3-229ENST00000554672 SMIM7Q9BQ49 75 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 UBE2D4Q9Y2X8 147 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 V9GYV3 84 aa2.74□□□□□ -1.97
ATXN3-229ENST00000554672 A0A1B0GW15 77 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 LINC00862A6NCI5 91 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 C9JQL5 133 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 GATCO43716 136 aaKnown RBP2.73□□□□□ -1.97
ATXN3-229ENST00000554672 PPP1R17O96001 155 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 RAB4AP20338 218 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 FCER1GP30273 86 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 KIAA0087Q14695 138 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 RNASE13Q5GAN3 156 aaKnown RBP2.73□□□□□ -1.97
ATXN3-229ENST00000554672 SPAG11AQ6PDA7 123 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 PACRGQ96M98 296 aaPredicted RBP2.73□□□□□ -1.97
ATXN3-229ENST00000554672 TIMM21Q9BVV7 248 aa2.73□□□□□ -1.97
ATXN3-229ENST00000554672 A0A1B0GXF2 115 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 ZNF727A8MUV8 499 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 RPL23P62829 140 aaKnown RBP2.72□□□□□ -1.97
ATXN3-229ENST00000554672 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 FAM104BQ5XKR9 115 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 NOTCH2NLQ7Z3S9 236 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 FAM104AQ969W3 186 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 C20orf78Q9BR46 151 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 EIF5A2Q9GZV4 153 aaKnown RBP2.72□□□□□ -1.97
ATXN3-229ENST00000554672 TP73-AS1Q9UF72 201 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 NAT8Q9UHE5 227 aa2.72□□□□□ -1.97
ATXN3-229ENST00000554672 IGLV5-45A0A087WSX0 123 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 PPP1R2P9O14990 202 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 TCAPO15273 167 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 MT1HP80294 61 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 IFITM2Q01629 132 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 RIGQ13278 110 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 PEA15Q15121 130 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 ZC2HC1BQ5TFG8 222 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 Q6ZUT4 128 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 ATP5L2Q7Z4Y8 100 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 MRPL55Q7Z7F7 128 aaKnown RBP2.71□□□□□ -1.98
ATXN3-229ENST00000554672 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 NAT8BQ9UHF3 227 aa2.71□□□□□ -1.98
ATXN3-229ENST00000554672 TGIF2-C20orf24A0A0A6YYL0 155 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 KRTAP16-1A8MUX0 517 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 PPBPP02775 128 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 UBE2AP49459 152 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 MRPS36P82909 103 aaKnown RBP2.7□□□□□ -1.98
ATXN3-229ENST00000554672 MRPL51Q4U2R6 128 aaKnown RBP2.7□□□□□ -1.98
ATXN3-229ENST00000554672 C2orf82Q6UX34 121 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 AMN1Q8IY45 258 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 BORCS7Q96B45 105 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 LINC00167Q96N53 147 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 XAGE1AQ9HD64 81 aa2.7□□□□□ -1.98
ATXN3-229ENST00000554672 RPL37AP8A6NKH3 93 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 S100A8P05109 93 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 CKS1BP61024 79 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 HBBP68871 147 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 PET117Q6UWS5 81 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 LINC01561Q8N1V8 128 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 LINC00469Q8N7U9 141 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms