RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
SHMT2-215ENST00000554656 LINC00242Q5T6M2 205 aa6.89□□□□□ -1.31
SHMT2-215ENST00000554656 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
SHMT2-215ENST00000554656 NMUP48645 174 aa6.88□□□□□ -1.31
SHMT2-215ENST00000554656 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
SHMT2-215ENST00000554656 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
SHMT2-215ENST00000554656 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
SHMT2-215ENST00000554656 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 LEPROTO15243 131 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 CIRBP-AS1Q8TBR5 109 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 UBE2WQ96B02 151 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 RMI2Q96E14 147 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 COX11Q9Y6N1 276 aa6.87□□□□□ -1.31
SHMT2-215ENST00000554656 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
SHMT2-215ENST00000554656 IGHV1-58A0A0C4DH39 117 aa6.86□□□□□ -1.31
SHMT2-215ENST00000554656 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
SHMT2-215ENST00000554656 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
SHMT2-215ENST00000554656 SS18Q15532 418 aa6.86□□□□□ -1.31
SHMT2-215ENST00000554656 ENHOQ6UWT2 76 aa6.86□□□□□ -1.31
SHMT2-215ENST00000554656 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
SHMT2-215ENST00000554656 PKHD1L1Q86WI1 4243 aa6.85□□□□□ -1.31
SHMT2-215ENST00000554656 J3QQQ9 107 aa6.85□□□□□ -1.31
SHMT2-215ENST00000554656 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
SHMT2-215ENST00000554656 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
SHMT2-215ENST00000554656 CDKN2A-AS1Q9UH64 79 aa6.85□□□□□ -1.31
SHMT2-215ENST00000554656 TRAV8-4A0A0B4J246 113 aa6.84□□□□□ -1.31
SHMT2-215ENST00000554656 IGHV3OR16-9A0A0B4J2B5 98 aa6.84□□□□□ -1.31
SHMT2-215ENST00000554656 IGLV5-39A0A0G2JS06 123 aa6.84□□□□□ -1.31
SHMT2-215ENST00000554656 MYMXA0A1B0GTQ4 84 aa6.84□□□□□ -1.31
SHMT2-215ENST00000554656 ANGP03950 147 aaKnown RBP6.84□□□□□ -1.31
SHMT2-215ENST00000554656 LGALS3P17931 250 aaKnown RBP6.84□□□□□ -1.31
SHMT2-215ENST00000554656 REG3AQ06141 175 aa6.84□□□□□ -1.31
SHMT2-215ENST00000554656 C2orf91Q6ZV80 131 aa6.84□□□□□ -1.31
SHMT2-215ENST00000554656 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.32
SHMT2-215ENST00000554656 A0A087WZ39 114 aa6.83□□□□□ -1.32
SHMT2-215ENST00000554656 COX6A2Q02221 97 aa6.83□□□□□ -1.32
SHMT2-215ENST00000554656 ZNF815PA8K554 130 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 SMIM1B2RUZ4 78 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 USP17L23D6RBM5 183 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 M0R143 59 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 CTAG1AP78358 180 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 TAL2Q16559 108 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 MIAQ16674 131 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
SHMT2-215ENST00000554656 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 C1orf43Q9BWL3 253 aa6.82□□□□□ -1.32
SHMT2-215ENST00000554656 PANO1I0J062 215 aa6.81□□□□□ -1.32
SHMT2-215ENST00000554656 CRPP02741 224 aa6.81□□□□□ -1.32
SHMT2-215ENST00000554656 SPINK8P0C7L1 97 aa6.81□□□□□ -1.32
SHMT2-215ENST00000554656 TSPEAR-AS2P59090 65 aa6.81□□□□□ -1.32
SHMT2-215ENST00000554656 HSD52Q0P140 79 aa6.81□□□□□ -1.32
SHMT2-215ENST00000554656 IGKV3OR2-268A0A0C4DH90 116 aa6.8□□□□□ -1.32
SHMT2-215ENST00000554656 C14orf177Q52M58 125 aa6.8□□□□□ -1.32
SHMT2-215ENST00000554656 SFTA2Q6UW10 78 aa6.8□□□□□ -1.32
SHMT2-215ENST00000554656 CLPSL2Q6UWE3 100 aa6.8□□□□□ -1.32
SHMT2-215ENST00000554656 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
SHMT2-215ENST00000554656 TTTY13Q9BZ97 58 aa6.8□□□□□ -1.32
SHMT2-215ENST00000554656 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
SHMT2-215ENST00000554656 COX7A2LO14548 114 aa6.79□□□□□ -1.32
SHMT2-215ENST00000554656 NDUFA1O15239 70 aa6.79□□□□□ -1.32
SHMT2-215ENST00000554656 OXTP01178 125 aa6.79□□□□□ -1.32
SHMT2-215ENST00000554656 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
SHMT2-215ENST00000554656 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
SHMT2-215ENST00000554656 NDUFA12Q9UI09 145 aa6.79□□□□□ -1.32
SHMT2-215ENST00000554656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
SHMT2-215ENST00000554656 TIMM17BO60830 172 aa6.78□□□□□ -1.32
SHMT2-215ENST00000554656 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
SHMT2-215ENST00000554656 HERV-K104P63124 156 aa6.78□□□□□ -1.32
SHMT2-215ENST00000554656 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
SHMT2-215ENST00000554656 IGHV3-64A0A075B6Q5 118 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 APOMO95445 188 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 XCL1P47992 114 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 FOXI1Q12951 378 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 Q6ZVH6 145 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 Q8IZM0 81 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 COX7B2Q8TF08 81 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 SNHG12Q9BXW3 62 aa6.77□□□□□ -1.33
SHMT2-215ENST00000554656 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
SHMT2-215ENST00000554656 CXCL5P42830 114 aa6.76□□□□□ -1.33
SHMT2-215ENST00000554656 BVES-AS1Q5T3Y7 98 aa6.76□□□□□ -1.33
SHMT2-215ENST00000554656 SERTAD4-AS1Q5TG53 156 aa6.76□□□□□ -1.33
SHMT2-215ENST00000554656 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
SHMT2-215ENST00000554656 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
SHMT2-215ENST00000554656 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
SHMT2-215ENST00000554656 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
SHMT2-215ENST00000554656 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
SHMT2-215ENST00000554656 SDIM1Q6ZPB5 146 aa6.75□□□□□ -1.33
SHMT2-215ENST00000554656 ORAOV1Q8WV07 137 aa6.75□□□□□ -1.33
SHMT2-215ENST00000554656 IGLV10-54A0A075B6I4 117 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 SLPIP03973 132 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 MALP21145 153 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 CIRBPQ14011 172 aaKnown RBP6.74□□□□□ -1.33
SHMT2-215ENST00000554656 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 CEND1Q8N111 149 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms