RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 LOC389332A0A1B0GUA5 103 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 NPSP0C0P6 89 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 C2orf66Q6UXQ4 117 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 LINC00173Q6ZV60 143 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 F8VRH5 84 aa14.21□□□□□ -0.13
FOXA1-204ENST00000554607 ZC2HC1BQ5TFG8 222 aa14.21□□□□□ -0.13
FOXA1-204ENST00000554607 FAM19A3Q7Z5A8 133 aa14.21□□□□□ -0.13
FOXA1-204ENST00000554607 SEC11AP67812 179 aa14.2□□□□□ -0.14
FOXA1-204ENST00000554607 Q8N8P6 123 aa14.19□□□□□ -0.14
FOXA1-204ENST00000554607 HERVK_113P63121 156 aa14.18□□□□□ -0.14
FOXA1-204ENST00000554607 ORMDL2Q53FV1 153 aa14.18□□□□□ -0.14
FOXA1-204ENST00000554607 CXCL5P42830 114 aa14.17□□□□□ -0.14
FOXA1-204ENST00000554607 SRSF3P84103 164 aaKnown RBP14.17□□□□□ -0.14
FOXA1-204ENST00000554607 IGIPA6NJ69 53 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 K7EMI3 77 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 PAPPA-AS1Q5QFB9 102 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 LINC00167Q96N53 147 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 GEMIN7Q9H840 131 aaKnown RBP14.15□□□□□ -0.14
FOXA1-204ENST00000554607 CDKN2A-AS1Q9UH64 79 aa14.15□□□□□ -0.14
FOXA1-204ENST00000554607 hCG_2014768A0A024R1R8 64 aa14.14□□□□□ -0.15
FOXA1-204ENST00000554607 RPL37AP8A6NKH3 93 aa14.14□□□□□ -0.15
FOXA1-204ENST00000554607 G0S2P27469 103 aa14.12□□□□□ -0.15
FOXA1-204ENST00000554607 FAM229BQ4G0N7 80 aa14.12□□□□□ -0.15
FOXA1-204ENST00000554607 ANAPC11Q9NYG5 84 aa14.12□□□□□ -0.15
FOXA1-204ENST00000554607 UBE2AP49459 152 aa14.11□□□□□ -0.15
FOXA1-204ENST00000554607 LCE2DQ5TA82 110 aaPredicted RBP14.11□□□□□ -0.15
FOXA1-204ENST00000554607 CDIP1Q9H305 208 aa14.11□□□□□ -0.15
FOXA1-204ENST00000554607 KRTAP13-2Q52LG2 175 aa14.1□□□□□ -0.15
FOXA1-204ENST00000554607 LINC00304Q8N9R0 145 aa14.1□□□□□ -0.15
FOXA1-204ENST00000554607 RETNLBQ9BQ08 111 aa14.09□□□□□ -0.15
FOXA1-204ENST00000554607 GAGE10A6NGK3 116 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 TPRXLQ17RH7 258 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 KRTAP13-1Q8IUC0 172 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 TIMM17AQ99595 171 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 NXT2Q9NPJ8 142 aaKnown RBP14.08□□□□□ -0.16
FOXA1-204ENST00000554607 MUC17Q685J3 4493 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 IGLV5-37A0A075B6J1 123 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 KRTAP9-6A0A140TA67 174 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 CTAG1AP78358 180 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 PDZD11Q5EBL8 140 aa14.06□□□□□ -0.16
FOXA1-204ENST00000554607 NKAPP1Q8N9T2 125 aa14.06□□□□□ -0.16
FOXA1-204ENST00000554607 COX7B2Q8TF08 81 aa14.05□□□□□ -0.16
FOXA1-204ENST00000554607 IGLV7-46A0A075B6I9 117 aa14.04□□□□□ -0.16
FOXA1-204ENST00000554607 IGKV2D-26A0A0A0MRZ7 120 aa14.04□□□□□ -0.16
FOXA1-204ENST00000554607 SMIM1B2RUZ4 78 aa14.04□□□□□ -0.16
FOXA1-204ENST00000554607 PNRC1Q12796 327 aaPredicted RBP14.03□□□□□ -0.16
FOXA1-204ENST00000554607 TOMM6Q96B49 74 aa14.03□□□□□ -0.16
FOXA1-204ENST00000554607 ANAPC16Q96DE5 110 aa14.01□□□□□ -0.17
FOXA1-204ENST00000554607 TINCRA0A1B0GVN0 87 aa14□□□□□ -0.17
FOXA1-204ENST00000554607 RAB5BP61020 215 aa14□□□□□ -0.17
FOXA1-204ENST00000554607 ERASQ7Z444 233 aa14□□□□□ -0.17
FOXA1-204ENST00000554607 MT-ND4LP03901 98 aa13.99□□□□□ -0.17
FOXA1-204ENST00000554607 SCGB3A1Q96QR1 104 aa13.98□□□□□ -0.17
FOXA1-204ENST00000554607 IGKV2-28A0A075B6P5 120 aa13.97□□□□□ -0.17
FOXA1-204ENST00000554607 IGLV5-45A0A087WSX0 123 aa13.97□□□□□ -0.17
FOXA1-204ENST00000554607 IGKV2D-28P01615 120 aa13.97□□□□□ -0.17
FOXA1-204ENST00000554607 LINC01549A6NIU2 74 aa13.94□□□□□ -0.18
FOXA1-204ENST00000554607 ATP5LO75964 103 aa13.94□□□□□ -0.18
FOXA1-204ENST00000554607 FAM19A1Q7Z5A9 133 aa13.93□□□□□ -0.18
FOXA1-204ENST00000554607 PPDPFQ9H3Y8 114 aa13.93□□□□□ -0.18
FOXA1-204ENST00000554607 SPINK8P0C7L1 97 aa13.92□□□□□ -0.18
FOXA1-204ENST00000554607 PRLHP81277 87 aa13.92□□□□□ -0.18
FOXA1-204ENST00000554607 MRPL18Q9H0U6 180 aaKnown RBP13.92□□□□□ -0.18
FOXA1-204ENST00000554607 SCO1O75880 301 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 ADCYAP1P18509 176 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 TMEM126AQ9H061 195 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 CST9LQ9H4G1 147 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 H3BRM9 83 aa13.89□□□□□ -0.19
FOXA1-204ENST00000554607 SPAG11AQ6PDA7 123 aa13.89□□□□□ -0.19
FOXA1-204ENST00000554607 PFN2P35080 140 aa13.88□□□□□ -0.19
FOXA1-204ENST00000554607 RPL24P83731 157 aaKnown RBP13.88□□□□□ -0.19
FOXA1-204ENST00000554607 PLEKHB2Q96CS7 222 aa13.88□□□□□ -0.19
FOXA1-204ENST00000554607 GNB1LQ9BYB4 327 aa13.88□□□□□ -0.19
FOXA1-204ENST00000554607 PMVKQ15126 192 aa13.87□□□□□ -0.19
FOXA1-204ENST00000554607 KIAA1644Q3SXP7 199 aa13.87□□□□□ -0.19
FOXA1-204ENST00000554607 TMEM238C9JI98 176 aa13.86□□□□□ -0.19
FOXA1-204ENST00000554607 VPREB1P12018 145 aa13.86□□□□□ -0.19
FOXA1-204ENST00000554607 CBLN2Q8IUK8 224 aa13.86□□□□□ -0.19
FOXA1-204ENST00000554607 C3orf22Q8N5N4 141 aa13.85□□□□□ -0.19
FOXA1-204ENST00000554607 M0R378 163 aa13.84□□□□□ -0.19
FOXA1-204ENST00000554607 FP248Q71RG6 208 aaPredicted RBP13.84□□□□□ -0.19
FOXA1-204ENST00000554607 SND1-IT1Q9HBX3 110 aa13.83□□□□□ -0.2
FOXA1-204ENST00000554607 LINC01546A6NGU7 62 aa13.82□□□□□ -0.2
FOXA1-204ENST00000554607 COX17Q14061 63 aa13.82□□□□□ -0.2
FOXA1-204ENST00000554607 LINC00337Q8N6G1 96 aa13.82□□□□□ -0.2
FOXA1-204ENST00000554607 C4orf48Q5BLP8 95 aa13.81□□□□□ -0.2
FOXA1-204ENST00000554607 ERG28Q9UKR5 140 aa13.81□□□□□ -0.2
FOXA1-204ENST00000554607 IGLV5-39A0A0G2JS06 123 aa13.79□□□□□ -0.2
FOXA1-204ENST00000554607 RAB14P61106 215 aa13.79□□□□□ -0.2
FOXA1-204ENST00000554607 HIGD2AQ9BW72 106 aa13.79□□□□□ -0.2
FOXA1-204ENST00000554607 TRAV9-1A0A075B6T8 112 aa13.76□□□□□ -0.21
FOXA1-204ENST00000554607 IGLC3P0DOY3 106 aa13.76□□□□□ -0.21
FOXA1-204ENST00000554607 SPRR4Q96PI1 79 aa13.76□□□□□ -0.21
FOXA1-204ENST00000554607 A0A1B0GVG6 124 aa13.75□□□□□ -0.21
FOXA1-204ENST00000554607 LINC01547P58512 204 aaPredicted RBP13.75□□□□□ -0.21
FOXA1-204ENST00000554607 ZNF706Q9Y5V0 76 aaPredicted RBP13.75□□□□□ -0.21
FOXA1-204ENST00000554607 ASB16-AS1Q495Z4 193 aa13.74□□□□□ -0.21
FOXA1-204ENST00000554607 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
FOXA1-204ENST00000554607 FA2HQ7L5A8 372 aa13.74□□□□□ -0.21
FOXA1-204ENST00000554607 SMCO4Q9NRQ5 59 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms