RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 CSDC2Q9Y534 153 aaKnown RBP1.8□□□□□ -2.12
PRPF39-207ENST00000554439 ANKRD17O75179 2603 aaKnown RBP1.8□□□□□ -2.12
PRPF39-207ENST00000554439 SONP18583 2426 aaKnown RBP1.8□□□□□ -2.12
PRPF39-207ENST00000554439 F5H768 121 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 NCR3O14931 201 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 ACYP1P07311 99 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 ATP5J2P56134 94 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 KRTAP15-1Q3LI76 137 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 FAM19A5Q7Z5A7 132 aaPredicted RBP1.8□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00526Q96FQ7 95 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 UBE2E2Q96LR5 201 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 XCL2Q9UBD3 114 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 NBEAL2Q6ZNJ1 2754 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 FN1P02751 2386 aaKnown RBP1.8□□□□□ -2.12
PRPF39-207ENST00000554439 LRRK2Q5S007 2527 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 TRGV1A0A0A0MS02 117 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 TRACP01848 142 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 MSMBP08118 114 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 COX7CP15954 63 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 MIR7-3HGQ8N6C7 128 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 WFDC9Q8NEX5 89 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 SMIM11BQ8TCY0 68 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 C10orf105Q8TEF2 133 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 DNAJC30Q96LL9 226 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 CCL19Q99731 98 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 C11orf68Q9H3H3 251 aaKnown RBP1.8□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00846Q9NV44 126 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 TOMM7Q9P0U1 55 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 NAV2Q8IVL1 2488 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 APCP25054 2843 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 LOC100131303A0A0U1RQF7 123 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 A0A1B0GX51 115 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 OXTP01178 125 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 PLA2G2AP14555 144 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 HIST1H4AP62805 103 aaKnown RBP1.79□□□□□ -2.12
PRPF39-207ENST00000554439 Q6ZTI0 123 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 CDC42SE2Q9NRR3 84 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 ABCA12Q86UK0 2595 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 MYO18BQ8IUG5 2567 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 LECT2O14960 151 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 DNAL4O96015 105 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 CRPP02741 224 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 PFN2P35080 140 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00158P58513 81 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 HILS1P60008 231 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 LINC01561Q8N1V8 128 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 DSCR8Q96T75 97 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 SND1-IT1Q9HBX3 110 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 FAM208BQ5VWN6 2430 aa1.79□□□□□ -2.12
PRPF39-207ENST00000554439 CR1P17927 2039 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 ZFYVE26Q68DK2 2539 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 IGLV4-60A0A075B6I1 120 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 CDK2AP2O75956 126 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 INAFM2P0DMQ5 153 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 CRYGAP11844 174 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 CXCL5P42830 114 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 RPL28P46779 137 aaKnown RBP1.78□□□□□ -2.12
PRPF39-207ENST00000554439 CCL18P55774 89 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 PRR3P79522 188 aaKnown RBP1.78□□□□□ -2.12
PRPF39-207ENST00000554439 RPL18AQ02543 176 aaKnown RBP1.78□□□□□ -2.12
PRPF39-207ENST00000554439 FAM222AQ5U5X8 452 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 C1orf158Q8N1D5 194 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 PRORYQ9H606 182 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 ZNF702PQ9H963 129 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 ACACBO00763 2458 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 PKD1L2Q7Z442 2459 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 TRAV13-2A0A0B4J235 113 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 SMIM9A6NGZ8 99 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 A8MTW9 85 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 J3KT08 172 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 K7EQD1 137 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 ATOX1O00244 68 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 UBE2L6O14933 153 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 INSP01308 110 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 NBL1P41271 181 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 UCNP55089 124 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 RPL36AP83881 106 aaKnown RBP1.78□□□□□ -2.12
PRPF39-207ENST00000554439 SS18Q15532 418 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 LRRC75A-AS1Q8N1F1 130 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 OR13C6PQ8NH95 151 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 COX7B2Q8TF08 81 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 RPL36ALQ969Q0 106 aaKnown RBP1.78□□□□□ -2.12
PRPF39-207ENST00000554439 UPK3BQ9BT76 320 aa1.78□□□□□ -2.12
PRPF39-207ENST00000554439 NOP10Q9NPE3 64 aaKnown RBP1.78□□□□□ -2.12
PRPF39-207ENST00000554439 GCN1Q92616 2671 aaKnown RBP1.78□□□□□ -2.12
PRPF39-207ENST00000554439 DOPEY1Q5JWR5 2465 aa1.78□□□□□ -2.13
PRPF39-207ENST00000554439 CACNA1AO00555 2505 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 B4DSR2 109 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 C4orf26Q17RF5 130 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 FAM19A3Q7Z5A8 133 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 FAM19A1Q7Z5A9 133 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 DYNLRB2Q8TF09 96 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 COPS9Q8WXC6 57 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 DPH3Q96FX2 82 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 WFDC10AQ9H1F0 79 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 CCDC168Q8NDH2 2452 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 TRAV23DV6A0A075B6W5 121 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 A0A087WZ39 114 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 DEFB114Q30KQ6 69 aa1.77□□□□□ -2.13
PRPF39-207ENST00000554439 CLPSL2Q6UWE3 100 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms