RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 F8WDY8 70 aa4.94□□□□□ -1.62
ABCD4-220ENST00000553998 ZNF561-AS1K7EIQ3 104 aa4.94□□□□□ -1.62
ABCD4-220ENST00000553998 LINC00469Q8N7U9 141 aa4.94□□□□□ -1.62
ABCD4-220ENST00000553998 C2orf48Q96LS8 159 aa4.94□□□□□ -1.62
ABCD4-220ENST00000553998 IGLV4-69A0A075B6H9 119 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 F8VRH5 84 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 H3BRM9 83 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 S100A6P06703 90 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 FABP4P15090 132 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 MUC2Q02817 5179 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 HIGD2BQ4VC39 106 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 ORAOV1Q8WV07 137 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 MAP1LC3CQ9BXW4 147 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 CDKN2A-AS1Q9UH64 79 aa4.93□□□□□ -1.62
ABCD4-220ENST00000553998 CHTOPQ9Y3Y2 248 aaKnown RBP4.93□□□□□ -1.62
ABCD4-220ENST00000553998 ZNF22P17026 224 aaPredicted RBP4.92□□□□□ -1.62
ABCD4-220ENST00000553998 SPAG11BQ08648 103 aa4.92□□□□□ -1.62
ABCD4-220ENST00000553998 ODF1Q14990 250 aa4.92□□□□□ -1.62
ABCD4-220ENST00000553998 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
ABCD4-220ENST00000553998 C9orf163Q8N9P6 203 aa4.92□□□□□ -1.62
ABCD4-220ENST00000553998 MRPL35Q9NZE8 188 aaKnown RBP4.92□□□□□ -1.62
ABCD4-220ENST00000553998 PKIGQ9Y2B9 76 aa4.92□□□□□ -1.62
ABCD4-220ENST00000553998 C11orf86A6NJI1 115 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 SMIM1B2RUZ4 78 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 SLPIP03973 132 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 SYCNQ0VAF6 134 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 KIAA0087Q14695 138 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 PET117Q6UWS5 81 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 Q8IZM0 81 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 LPAP08519 4548 aa4.91□□□□□ -1.62
ABCD4-220ENST00000553998 IGLV5-39A0A0G2JS06 123 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 SYS1-DBNDD2H3BUS1 97 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 NDUFA1O15239 70 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 PRSS2P07478 247 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 PLNP26678 52 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 S100A2P29034 98 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 CXCL5P42830 114 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 CIRBPQ14011 172 aaKnown RBP4.9□□□□□ -1.63
ABCD4-220ENST00000553998 RNF151Q2KHN1 245 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 TMEM170BQ5T4T1 132 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 HIST3H2BBQ8N257 126 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 CARD19Q96LW7 228 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 CAMK2N2Q96S95 79 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
ABCD4-220ENST00000553998 H0Y8G0 127 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 DPM2O94777 84 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 SPINK8P0C7L1 97 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 AKR1D1P51857 326 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 C6orf226Q5I0X4 101 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 LINC00526Q96FQ7 95 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
ABCD4-220ENST00000553998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.89□□□□□ -1.63
ABCD4-220ENST00000553998 TRBV30A0A0K0K1B3 111 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 C20orf202A1L168 122 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 C5orf52A6NGY3 159 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 PANO1I0J062 215 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 IGKCP01834 107 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 C3orf79P0CE67 100 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 CKS1BP61024 79 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 SNRPEP62304 92 aaKnown RBP4.88□□□□□ -1.63
ABCD4-220ENST00000553998 LINC01545Q5VT33 79 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 SFTA2Q6UW10 78 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 COX7B2Q8TF08 81 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 HIST1H2BLQ99880 126 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 TOMM7Q9P0U1 55 aa4.88□□□□□ -1.63
ABCD4-220ENST00000553998 KRTAP10-8P60410 259 aa4.87□□□□□ -1.63
ABCD4-220ENST00000553998 KRTDAPP60985 99 aa4.87□□□□□ -1.63
ABCD4-220ENST00000553998 HERVK_113P61574 105 aa4.87□□□□□ -1.63
ABCD4-220ENST00000553998 UNQ6190/PRO20217Q6UXQ8 127 aa4.87□□□□□ -1.63
ABCD4-220ENST00000553998 PMCHL2Q9BQD1 86 aa4.87□□□□□ -1.63
ABCD4-220ENST00000553998 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
ABCD4-220ENST00000553998 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
ABCD4-220ENST00000553998 TLX1NBP0CAT3 122 aa4.86□□□□□ -1.63
ABCD4-220ENST00000553998 C10orf25Q5T742 122 aa4.86□□□□□ -1.63
ABCD4-220ENST00000553998 C2orf82Q6UX34 121 aa4.86□□□□□ -1.63
ABCD4-220ENST00000553998 C6orf48Q9UBA6 75 aa4.86□□□□□ -1.63
ABCD4-220ENST00000553998 PLEKHB2Q96CS7 222 aa4.85□□□□□ -1.63
ABCD4-220ENST00000553998 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
ABCD4-220ENST00000553998 E9PLD3 99 aa4.84□□□□□ -1.63
ABCD4-220ENST00000553998 NDUFC2-KCTD14E9PQ53 114 aa4.84□□□□□ -1.63
ABCD4-220ENST00000553998 LEPROTO15243 131 aa4.84□□□□□ -1.63
ABCD4-220ENST00000553998 PTTG1IPP53801 180 aa4.84□□□□□ -1.63
ABCD4-220ENST00000553998 NMUP48645 174 aa4.83□□□□□ -1.64
ABCD4-220ENST00000553998 HERV-K104P63124 156 aa4.83□□□□□ -1.64
ABCD4-220ENST00000553998 SPACA4Q8TDM5 124 aa4.83□□□□□ -1.64
ABCD4-220ENST00000553998 ZNF625Q96I27 306 aaPredicted RBP4.83□□□□□ -1.64
ABCD4-220ENST00000553998 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
ABCD4-220ENST00000553998 NDUFA12Q9UI09 145 aa4.83□□□□□ -1.64
ABCD4-220ENST00000553998 A0A087WYN8 130 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 A0A096LNI7 61 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 MYMXA0A1B0GTQ4 84 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 LINC00587B1AMM8 73 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 J3QQQ9 107 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 RPL18AQ02543 176 aaKnown RBP4.82□□□□□ -1.64
ABCD4-220ENST00000553998 GAGE2BQ13066 116 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 COX17Q14061 63 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 Q6ZRP5 223 aa4.82□□□□□ -1.64
ABCD4-220ENST00000553998 IGKV2-24A0A0C4DH68 120 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms