RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 UBE2D4Q9Y2X8 147 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
ATXN3-223ENST00000553686 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-223ENST00000553686 M0R036 132 aa3.19□□□□□ -1.9
ATXN3-223ENST00000553686 RNASEKQ6P5S7 137 aaKnown RBP3.19□□□□□ -1.9
ATXN3-223ENST00000553686 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
ATXN3-223ENST00000553686 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-223ENST00000553686 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
ATXN3-223ENST00000553686 LINC00959A0A1B0GUT2 108 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 GATCO43716 136 aaKnown RBP3.18□□□□□ -1.9
ATXN3-223ENST00000553686 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 SERF2P84101 59 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 TMEM241Q24JQ0 296 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 SPANXN1Q5VSR9 72 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 TMEM252Q8N6L7 170 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 PSMG3Q9BT73 122 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-223ENST00000553686 EIF5A2Q9GZV4 153 aaKnown RBP3.18□□□□□ -1.9
ATXN3-223ENST00000553686 EPDR1Q9UM22 224 aa3.18□□□□□ -1.9
ATXN3-223ENST00000553686 A0A1W2PPV4 95 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 IGSF23A1L1A6 192 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 F8WDY8 70 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 M0QY20 66 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 COX7A2LO14548 114 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 IFNA1P01562 189 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 MBP02144 154 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 RPL35P42766 123 aaKnown RBP3.17□□□□□ -1.9
ATXN3-223ENST00000553686 AKR1C8PQ5T2L2 129 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 MBD3L1Q8WWY6 194 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 SMIM3Q9BZL3 60 aa3.17□□□□□ -1.9
ATXN3-223ENST00000553686 MRPL35Q9NZE8 188 aaKnown RBP3.17□□□□□ -1.9
ATXN3-223ENST00000553686 TMSB15BA0A087X1C1 80 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 HMGB3O15347 200 aaKnown RBP3.16□□□□□ -1.9
ATXN3-223ENST00000553686 BCE1O60756 84 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
ATXN3-223ENST00000553686 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 ZNF25P17030 456 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-223ENST00000553686 ATP6V0CP27449 155 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 CEND1Q8N111 149 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 FAM213BQ8TBF2 198 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 NIT2Q9NQR4 276 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 ARL2-SNX15V9GYD0 113 aa3.16□□□□□ -1.9
ATXN3-223ENST00000553686 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 TMEM250H0YL14 139 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 SH2D1AO60880 128 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 CRIP1P50238 77 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 PCOTHQ58A44 107 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 RASL11AQ6T310 242 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 OR10AG1Q8NH19 301 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 AP1S3Q96PC3 154 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 WDR61Q9GZS3 305 aaKnown RBP3.15□□□□□ -1.91
ATXN3-223ENST00000553686 ZFP30Q9Y2G7 519 aa3.15□□□□□ -1.91
ATXN3-223ENST00000553686 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-223ENST00000553686 NDUFA1O15239 70 aa3.14□□□□□ -1.91
ATXN3-223ENST00000553686 NCR2O95944 276 aa3.14□□□□□ -1.91
ATXN3-223ENST00000553686 MGPP08493 103 aa3.14□□□□□ -1.91
ATXN3-223ENST00000553686 SPAG11BQ08648 103 aa3.14□□□□□ -1.91
ATXN3-223ENST00000553686 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-223ENST00000553686 MANBALQ9NQG1 85 aa3.14□□□□□ -1.91
ATXN3-223ENST00000553686 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-223ENST00000553686 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 CTXND1A0A1B0GTU2 59 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 IGKV2-29A2NJV5 120 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-223ENST00000553686 SPINK1P00995 79 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 CXCL1P09341 107 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 OR5AL1P0C617 328 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 UBE2AP49459 152 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 ERASQ7Z444 233 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 FAM19A2Q8N3H0 131 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 OR10D4PQ8NGN7 298 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 NAT8Q9UHE5 227 aa3.13□□□□□ -1.91
ATXN3-223ENST00000553686 MUC21A0A140T8X8 626 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 SNAI2O43623 268 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 PDE6DO43924 150 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 NTF3P20783 257 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 CCL20P78556 96 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-223ENST00000553686 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
ATXN3-223ENST00000553686 ACTR3CQ9C0K3 210 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-223ENST00000553686 TMEM167BQ9NRX6 74 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 C22orf24Q9Y442 160 aa3.12□□□□□ -1.91
ATXN3-223ENST00000553686 MAP1LC3B2A6NCE7 125 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 ZNF727A8MUV8 499 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 APCSP02743 223 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 ARL14EPLP0DKL9 152 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-223ENST00000553686 CTRLP40313 264 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms