RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 WT1-ASQ06250 92 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 ANKRD11Q6UB99 2663 aaPredicted RBP2.87□□□□□ -1.95
RDH11-204ENST00000553578 KLKP1Q107X0 134 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 LINC00588Q9Y4M8 146 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 IGLV11-55A0A075B6I3 123 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 IGHV3OR16-10A0A075B7F0 116 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 IGHV3-49A0A0A0MS15 119 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 IGHV3-23P01764 117 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 C15orf32Q32M92 178 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 SPANXN1Q5VSR9 72 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 UBL5Q9BZL1 73 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 MRPL36Q9P0J6 103 aaKnown RBP2.87□□□□□ -1.95
RDH11-204ENST00000553578 ZNF469Q96JG9 3925 aaPredicted RBP2.87□□□□□ -1.95
RDH11-204ENST00000553578 SVEP1Q4LDE5 3571 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 MGPP08493 103 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 NOTCH2NLQ7Z3S9 236 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 LINC00269Q8N2A0 174 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 SMIM2Q9BVW6 85 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 PRRC2AP48634 2157 aaKnown RBP2.86□□□□□ -1.95
RDH11-204ENST00000553578 HRNRQ86YZ3 2850 aaPredicted RBP2.86□□□□□ -1.95
RDH11-204ENST00000553578 HAMPP81172 84 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 PDE6HQ13956 83 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 VPS13CQ709C8 3753 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 DOPEY1Q5JWR5 2465 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 TRGV3P03979 118 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 PATE2Q6UY27 113 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 RNF185Q96GF1 192 aa2.86□□□□□ -1.95
RDH11-204ENST00000553578 ATP5EP2Q5VTU8 51 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 C7orf65Q6ZTY9 151 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 ZNF575Q86XF7 245 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 ITPR1Q14643 2758 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 IGHV3-66A0A0C4DH42 116 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 DNAJC9-AS1A6NH13 148 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 LYNX1G3V0Z9 82 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 K7EIM0 57 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 LYNX1P0DP58 116 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 TOMM6Q96B49 74 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 WNK1Q9H4A3 2382 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 IGKV3-7A0A075B6H7 116 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 IGHV6-1A0A0B4J1U7 121 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 A0A0J9YWU9 116 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 LEPROTO15243 131 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 TMEM141Q96I45 108 aa2.85□□□□□ -1.95
RDH11-204ENST00000553578 UBR5O95071 2799 aaPredicted RBP2.85□□□□□ -1.95
RDH11-204ENST00000553578 SONP18583 2426 aaKnown RBP2.84□□□□□ -1.95
RDH11-204ENST00000553578 IGHV4-30-2A0A087WSY4 118 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 CRIP1P50238 77 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 Q8TAT8 98 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 OPRPNQ99935 248 aaPredicted RBP2.84□□□□□ -1.95
RDH11-204ENST00000553578 CNFNQ9BYD5 112 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 CUBNO60494 3623 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 A8MTW9 85 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 H3BRN7 92 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 NCR3O14931 201 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 C11orf72Q8NBR9 251 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 NDUFA12Q9UI09 145 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 ANKHD1Q8IWZ3 2542 aaKnown RBP2.84□□□□□ -1.95
RDH11-204ENST00000553578 CSPG4Q6UVK1 2322 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 CENPEQ02224 2701 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 IGF2RP11717 2491 aa2.84□□□□□ -1.95
RDH11-204ENST00000553578 IBA57-AS1B1ANH7 110 aa2.84□□□□□ -1.96
RDH11-204ENST00000553578 HCG22E2RYF7 251 aa2.84□□□□□ -1.96
RDH11-204ENST00000553578 PRR3P79522 188 aaKnown RBP2.84□□□□□ -1.96
RDH11-204ENST00000553578 TRAV22A0A0B4J277 110 aa2.84□□□□□ -1.96
RDH11-204ENST00000553578 A8MU10 97 aa2.84□□□□□ -1.96
RDH11-204ENST00000553578 TMEM254Q8TBM7 123 aa2.84□□□□□ -1.96
RDH11-204ENST00000553578 PTPN13Q12923 2485 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 CACNA1AO00555 2505 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 NCOR2Q9Y618 2525 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 IGLV2-18A0A075B6J9 118 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 IGKV2-40A0A087WW87 121 aaPredicted RBP2.83□□□□□ -1.96
RDH11-204ENST00000553578 SDHAF1A6NFY7 115 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 IGKV1-17P01599 117 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 IGKV2D-40P01614 121 aaPredicted RBP2.83□□□□□ -1.96
RDH11-204ENST00000553578 RNASE4P34096 147 aaKnown RBP2.83□□□□□ -1.96
RDH11-204ENST00000553578 SYCNQ0VAF6 134 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 CSNK1G2-AS1Q8NCQ2 148 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 KRTAP4-5Q9BYR2 181 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 SND1-IT1Q9HBX3 110 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 TRAV10A0A0B4J240 114 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 C19orf84I3L1E1 186 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 PRM2P04554 102 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 KRTAP15-1Q3LI76 137 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 C5orf56Q8N8D9 126 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 LINC01560Q8TB33 94 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 KLLNB2CW77 178 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 K7EQG2 157 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 LY6HO94772 140 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 MIAQ16674 131 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 VMO1Q7Z5L0 202 aa2.83□□□□□ -1.96
RDH11-204ENST00000553578 MUC4Q99102 2169 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 RPL27AP46776 148 aaKnown RBP2.82□□□□□ -1.96
RDH11-204ENST00000553578 GPHB5Q86YW7 130 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 CHD8Q9HCK8 2581 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 PRR4Q16378 134 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 NREPQ16612 68 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 ATP11AUNQ6ZP68 121 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms