RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 A0A0U1RRA0 63 aa8.99□□□□□ -0.97
SHMT2-205ENST00000553474 CRPP02741 224 aa8.99□□□□□ -0.97
SHMT2-205ENST00000553474 RPL28P46779 137 aaKnown RBP8.99□□□□□ -0.97
SHMT2-205ENST00000553474 XGP55808 180 aa8.99□□□□□ -0.97
SHMT2-205ENST00000553474 SPATA3Q8NHX4 192 aa8.99□□□□□ -0.97
SHMT2-205ENST00000553474 TEX49A0A1B0GTD5 131 aa8.98□□□□□ -0.97
SHMT2-205ENST00000553474 Q8IZM0 81 aa8.98□□□□□ -0.97
SHMT2-205ENST00000553474 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
SHMT2-205ENST00000553474 TOMM7Q9P0U1 55 aa8.98□□□□□ -0.97
SHMT2-205ENST00000553474 TRAV8-4A0A0B4J246 113 aa8.97□□□□□ -0.97
SHMT2-205ENST00000553474 PAX4O43316 350 aa8.97□□□□□ -0.97
SHMT2-205ENST00000553474 MRPL23Q16540 153 aaKnown RBP8.97□□□□□ -0.97
SHMT2-205ENST00000553474 MIFP14174 115 aa8.96□□□□□ -0.97
SHMT2-205ENST00000553474 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.97
SHMT2-205ENST00000553474 ANK2Q01484 3957 aa8.96□□□□□ -0.97
SHMT2-205ENST00000553474 IGKV3OR2-268A0A0C4DH90 116 aa8.96□□□□□ -0.98
SHMT2-205ENST00000553474 MT-ATP8P03928 68 aa8.96□□□□□ -0.98
SHMT2-205ENST00000553474 LINC00158P58513 81 aa8.96□□□□□ -0.98
SHMT2-205ENST00000553474 CXCL5P42830 114 aa8.95□□□□□ -0.98
SHMT2-205ENST00000553474 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
SHMT2-205ENST00000553474 TRRAPQ9Y4A5 3859 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 ACYP1P07311 99 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 PKD1L1Q8TDX9 2849 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 H0YGX0 51 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 SNCGO76070 127 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 ATP5G1P05496 136 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 C5orf38Q86SI9 138 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
SHMT2-205ENST00000553474 CCL18P55774 89 aa8.93□□□□□ -0.98
SHMT2-205ENST00000553474 DAD1P61803 113 aa8.93□□□□□ -0.98
SHMT2-205ENST00000553474 COX17Q14061 63 aa8.93□□□□□ -0.98
SHMT2-205ENST00000553474 Q6Q795 121 aa8.93□□□□□ -0.98
SHMT2-205ENST00000553474 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
SHMT2-205ENST00000553474 WFDC9Q8NEX5 89 aa8.93□□□□□ -0.98
SHMT2-205ENST00000553474 IGKV2-28A0A075B6P5 120 aa8.92□□□□□ -0.98
SHMT2-205ENST00000553474 IGKV2D-28P01615 120 aa8.92□□□□□ -0.98
SHMT2-205ENST00000553474 DEFB135Q30KP9 77 aa8.92□□□□□ -0.98
SHMT2-205ENST00000553474 LINC00337Q8N6G1 96 aa8.92□□□□□ -0.98
SHMT2-205ENST00000553474 IGHV4-28A0A0C4DH34 117 aa8.91□□□□□ -0.98
SHMT2-205ENST00000553474 MUC7Q8TAX7 377 aa8.91□□□□□ -0.98
SHMT2-205ENST00000553474 SPART-AS1P0CW21 52 aa8.91□□□□□ -0.98
SHMT2-205ENST00000553474 XCL1P47992 114 aa8.91□□□□□ -0.98
SHMT2-205ENST00000553474 Q8NAQ8 132 aa8.91□□□□□ -0.98
SHMT2-205ENST00000553474 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
SHMT2-205ENST00000553474 MGAM2Q2M2H8 2515 aa8.89□□□□□ -0.99
SHMT2-205ENST00000553474 NDUFC2O95298 119 aa8.89□□□□□ -0.99
SHMT2-205ENST00000553474 BAALC-AS2P0C853 105 aa8.89□□□□□ -0.99
SHMT2-205ENST00000553474 OXLD1Q5BKU9 147 aa8.89□□□□□ -0.99
SHMT2-205ENST00000553474 DNAL4O96015 105 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 PFN2P35080 140 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 REG3AQ06141 175 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 GAGE2BQ13066 116 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 GAGE2EQ4V326 116 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 LELP1Q5T871 98 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
SHMT2-205ENST00000553474 LINC00269Q8N2A0 174 aa8.87□□□□□ -0.99
SHMT2-205ENST00000553474 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-205ENST00000553474 ANGP03950 147 aaKnown RBP8.86□□□□□ -0.99
SHMT2-205ENST00000553474 FAM218AQ96MZ4 157 aa8.86□□□□□ -0.99
SHMT2-205ENST00000553474 DNHD1Q96M86 4753 aa8.86□□□□□ -0.99
SHMT2-205ENST00000553474 NOTCH1P46531 2555 aa8.86□□□□□ -0.99
SHMT2-205ENST00000553474 A0A1B0GX51 115 aa8.86□□□□□ -0.99
SHMT2-205ENST00000553474 MALP21145 153 aa8.86□□□□□ -0.99
SHMT2-205ENST00000553474 KIAA0087Q14695 138 aa8.86□□□□□ -0.99
SHMT2-205ENST00000553474 C15orf53Q8NAA6 179 aa8.86□□□□□ -0.99
SHMT2-205ENST00000553474 A0A096LPF7 62 aa8.85□□□□□ -0.99
SHMT2-205ENST00000553474 IGHV4-30-4P0DP06 118 aa8.84□□□□□ -0.99
SHMT2-205ENST00000553474 H3BNG1 76 aa8.84□□□□□ -1
SHMT2-205ENST00000553474 CLPSL2Q6UWE3 100 aa8.84□□□□□ -1
SHMT2-205ENST00000553474 CELA1Q9UNI1 258 aa8.84□□□□□ -1
SHMT2-205ENST00000553474 KLK5Q9Y337 293 aaPredicted RBP8.84□□□□□ -1
SHMT2-205ENST00000553474 DEFB4AO15263 64 aa8.83□□□□□ -1
SHMT2-205ENST00000553474 IMUPQ9GZP8 106 aa8.83□□□□□ -1
SHMT2-205ENST00000553474 PRR34Q9NV39 138 aa8.83□□□□□ -1
SHMT2-205ENST00000553474 CMYA5Q8N3K9 4069 aa8.82□□□□□ -1
SHMT2-205ENST00000553474 NBEAL1Q6ZS30 2694 aa8.82□□□□□ -1
SHMT2-205ENST00000553474 OR13C6PQ8NH95 151 aa8.82□□□□□ -1
SHMT2-205ENST00000553474 TMEM126AQ9H061 195 aa8.82□□□□□ -1
SHMT2-205ENST00000553474 NBEAL2Q6ZNJ1 2754 aa8.82□□□□□ -1
SHMT2-205ENST00000553474 TRBV7-7A0A0K0K1E9 115 aa8.81□□□□□ -1
SHMT2-205ENST00000553474 SDIM1Q6ZPB5 146 aa8.81□□□□□ -1
SHMT2-205ENST00000553474 KRTAP10-11P60412 298 aa8.81□□□□□ -1
SHMT2-205ENST00000553474 ANAPC13Q9BS18 74 aa8.81□□□□□ -1
SHMT2-205ENST00000553474 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
SHMT2-205ENST00000553474 C22orf24Q9Y442 160 aa8.81□□□□□ -1
SHMT2-205ENST00000553474 A0A087WYN8 130 aa8.8□□□□□ -1
SHMT2-205ENST00000553474 TTC32Q5I0X7 151 aa8.8□□□□□ -1
SHMT2-205ENST00000553474 A0A0J9YWU9 116 aa8.79□□□□□ -1
SHMT2-205ENST00000553474 B5MCH6 92 aa8.79□□□□□ -1
SHMT2-205ENST00000553474 PRB2P02812 416 aaPredicted RBP8.79□□□□□ -1
SHMT2-205ENST00000553474 LINC00643Q86TS7 51 aa8.79□□□□□ -1
SHMT2-205ENST00000553474 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
SHMT2-205ENST00000553474 NDUFV3P56181 108 aaKnown RBP8.78□□□□□ -1
SHMT2-205ENST00000553474 Q9HAA7 133 aa8.78□□□□□ -1
SHMT2-205ENST00000553474 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
SHMT2-205ENST00000553474 LECT2O14960 151 aa8.78□□□□□ -1
SHMT2-205ENST00000553474 EGFEM1PQ0D2K5 195 aa8.78□□□□□ -1
SHMT2-205ENST00000553474 MRAPQ8TCY5 172 aa8.78□□□□□ -1
SHMT2-205ENST00000553474 LINC00167Q96N53 147 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms