RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SEC11CQ9BY50 192 aa6.03□□□□□ -1.44
ACTN1-208ENST00000553370 C6orf48Q9UBA6 75 aa6.03□□□□□ -1.44
ACTN1-208ENST00000553370 TRBV24-1A0A075B6N3 115 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 IGHV3OR16-9A0A0B4J2B5 98 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 SMIM27A0A1W2PRY6 76 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 C9JQL5 133 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 NPYP01303 97 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 PPBPP02775 128 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
ACTN1-208ENST00000553370 C10orf25Q5T742 122 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 Q6ZN92 141 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 TEX43Q6ZNM6 134 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 ORMDL3Q8N138 153 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 TOMM7Q9P0U1 55 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 PAM16Q9Y3D7 125 aa6.02□□□□□ -1.45
ACTN1-208ENST00000553370 TRBV30A0A0K0K1B3 111 aa6.01□□□□□ -1.45
ACTN1-208ENST00000553370 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
ACTN1-208ENST00000553370 CKS1BP61024 79 aa6.01□□□□□ -1.45
ACTN1-208ENST00000553370 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
ACTN1-208ENST00000553370 PRELID3AQ96N28 172 aa6.01□□□□□ -1.45
ACTN1-208ENST00000553370 CARHSP1Q9Y2V2 147 aaKnown RBP6.01□□□□□ -1.45
ACTN1-208ENST00000553370 NDUFC2-KCTD14E9PQ53 114 aa6□□□□□ -1.45
ACTN1-208ENST00000553370 C2orf82Q6UX34 121 aa6□□□□□ -1.45
ACTN1-208ENST00000553370 LOC389332A0A1B0GUA5 103 aa5.99□□□□□ -1.45
ACTN1-208ENST00000553370 TMEM136Q6ZRR5 245 aa5.99□□□□□ -1.45
ACTN1-208ENST00000553370 MAP1LC3AQ9H492 121 aa5.99□□□□□ -1.45
ACTN1-208ENST00000553370 IGLV4-3A0A075B6K6 122 aa5.98□□□□□ -1.45
ACTN1-208ENST00000553370 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
ACTN1-208ENST00000553370 A4D1N5 150 aa5.98□□□□□ -1.45
ACTN1-208ENST00000553370 LINC00242Q5T6M2 205 aa5.98□□□□□ -1.45
ACTN1-208ENST00000553370 SVBPQ8N300 66 aa5.98□□□□□ -1.45
ACTN1-208ENST00000553370 LINC00469Q8N7U9 141 aa5.98□□□□□ -1.45
ACTN1-208ENST00000553370 CYSLTR1Q9Y271 337 aa5.98□□□□□ -1.45
ACTN1-208ENST00000553370 SNAPINO95295 136 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 APOC3P02656 99 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 ADCYAP1P18509 176 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 SNRPEP62304 92 aaKnown RBP5.97□□□□□ -1.45
ACTN1-208ENST00000553370 PNRC1Q12796 327 aaPredicted RBP5.97□□□□□ -1.45
ACTN1-208ENST00000553370 LBHQ53QV2 105 aaPredicted RBP5.97□□□□□ -1.45
ACTN1-208ENST00000553370 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 ATP5L2Q7Z4Y8 100 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 VCX2Q9H322 139 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 LPAP08519 4548 aa5.97□□□□□ -1.45
ACTN1-208ENST00000553370 A0A1B0GXF2 115 aa5.96□□□□□ -1.46
ACTN1-208ENST00000553370 NUPR1O60356 82 aa5.96□□□□□ -1.46
ACTN1-208ENST00000553370 C9orf129Q5T035 196 aaKnown RBP5.96□□□□□ -1.46
ACTN1-208ENST00000553370 C2orf66Q6UXQ4 117 aa5.96□□□□□ -1.46
ACTN1-208ENST00000553370 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
ACTN1-208ENST00000553370 ALKBH7Q9BT30 221 aaPredicted RBP5.96□□□□□ -1.46
ACTN1-208ENST00000553370 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
ACTN1-208ENST00000553370 TSPAN13O95857 204 aa5.95□□□□□ -1.46
ACTN1-208ENST00000553370 UBE2V1Q13404 147 aa5.95□□□□□ -1.46
ACTN1-208ENST00000553370 KIAA0087Q14695 138 aa5.95□□□□□ -1.46
ACTN1-208ENST00000553370 ORMDL2Q53FV1 153 aa5.95□□□□□ -1.46
ACTN1-208ENST00000553370 PAPPA-AS1Q5QFB9 102 aa5.95□□□□□ -1.46
ACTN1-208ENST00000553370 XAGE1AQ9HD64 81 aa5.95□□□□□ -1.46
ACTN1-208ENST00000553370 LAMTOR2Q9Y2Q5 125 aa5.95□□□□□ -1.46
ACTN1-208ENST00000553370 ZNF861PO60384 105 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 RPL28P46779 137 aaKnown RBP5.94□□□□□ -1.46
ACTN1-208ENST00000553370 SEC11AP67812 179 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 RHEBQ15382 184 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 ZC2HC1BQ5TFG8 222 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 Q8IZM0 81 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 LINC01561Q8N1V8 128 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 Q8N8P6 123 aa5.94□□□□□ -1.46
ACTN1-208ENST00000553370 HERVK_113P63121 156 aa5.93□□□□□ -1.46
ACTN1-208ENST00000553370 MPLKIPQ8TAP9 179 aa5.93□□□□□ -1.46
ACTN1-208ENST00000553370 C22orf24Q9Y442 160 aa5.93□□□□□ -1.46
ACTN1-208ENST00000553370 F8VRH5 84 aa5.92□□□□□ -1.46
ACTN1-208ENST00000553370 MT-ND4LP03901 98 aa5.92□□□□□ -1.46
ACTN1-208ENST00000553370 G0S2P27469 103 aa5.92□□□□□ -1.46
ACTN1-208ENST00000553370 GAGE2AQ6NT46 116 aa5.92□□□□□ -1.46
ACTN1-208ENST00000553370 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
ACTN1-208ENST00000553370 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
ACTN1-208ENST00000553370 NKAPP1Q8N9T2 125 aa5.92□□□□□ -1.46
ACTN1-208ENST00000553370 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
ACTN1-208ENST00000553370 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
ACTN1-208ENST00000553370 CRYGAP11844 174 aa5.91□□□□□ -1.46
ACTN1-208ENST00000553370 CXCL5P42830 114 aa5.91□□□□□ -1.46
ACTN1-208ENST00000553370 UBE2AP49459 152 aa5.91□□□□□ -1.46
ACTN1-208ENST00000553370 NXT2Q9NPJ8 142 aaKnown RBP5.91□□□□□ -1.46
ACTN1-208ENST00000553370 K7EMI3 77 aa5.9□□□□□ -1.46
ACTN1-208ENST00000553370 BCE1O60756 84 aa5.9□□□□□ -1.46
ACTN1-208ENST00000553370 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.46
ACTN1-208ENST00000553370 LINC00173Q6ZV60 143 aa5.9□□□□□ -1.46
ACTN1-208ENST00000553370 AMELXQ99217 191 aa5.9□□□□□ -1.46
ACTN1-208ENST00000553370 RPS10P5Q9NQ39 176 aa5.9□□□□□ -1.46
ACTN1-208ENST00000553370 SMCO4Q9NRQ5 59 aa5.9□□□□□ -1.46
ACTN1-208ENST00000553370 CDKN2A-AS1Q9UH64 79 aa5.9□□□□□ -1.46
ACTN1-208ENST00000553370 RPL37AP8A6NKH3 93 aa5.89□□□□□ -1.47
ACTN1-208ENST00000553370 URB1-AS1Q96HZ7 61 aa5.89□□□□□ -1.47
ACTN1-208ENST00000553370 TP73-AS1Q9UF72 201 aa5.89□□□□□ -1.47
ACTN1-208ENST00000553370 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
ACTN1-208ENST00000553370 RAB5BP61020 215 aa5.88□□□□□ -1.47
ACTN1-208ENST00000553370 COX7B2Q8TF08 81 aa5.88□□□□□ -1.47
ACTN1-208ENST00000553370 SCGB3A1Q96QR1 104 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms