RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 ERASQ7Z444 233 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 ZNF664Q8N3J9 261 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 OR5A1Q8NGJ0 315 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 FAM104AQ969W3 186 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 TIMM17AQ99595 171 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 CDC42SE2Q9NRR3 84 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 TRAV8-3A0A0A6YYJ7 113 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 ANGP03950 147 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 PDZD11Q5EBL8 140 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 ENHOQ6UWT2 76 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 LINC00269Q8N2A0 174 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 STPG4Q8N801 248 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 TMEM141Q96I45 108 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 KLK12Q9UKR0 248 aa4.22□□□□□ -1.73
DEPDC4-210ENST00000551642 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 TRAV8-4A0A0B4J246 113 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 CCL25O15444 150 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 NUPR1O60356 82 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 NDUFA6P56556 154 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 REG3AQ06141 175 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 PMCHL1Q16048 86 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 MIAQ16674 131 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 Q6ZUT4 128 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 SCGB3A1Q96QR1 104 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 AMELXQ99217 191 aa4.21□□□□□ -1.74
DEPDC4-210ENST00000551642 LINC00959A0A1B0GUT2 108 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 ATP5LO75964 103 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 CRPP02741 224 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 Q6ZN92 141 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 TEX43Q6ZNM6 134 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 UBE2WQ96B02 151 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 RMI2Q96E14 147 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 PACRGQ96M98 296 aaPredicted RBP4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 OPRPNQ99935 248 aaPredicted RBP4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 VCX2Q9H322 139 aa4.2□□□□□ -1.74
DEPDC4-210ENST00000551642 LEPROTL1O95214 131 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 PMVKQ15126 192 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 SS18Q15532 418 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 RNASE13Q5GAN3 156 aaKnown RBP4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 CLPSL2Q6UWE3 100 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 FAM19A3Q7Z5A8 133 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 BAALCQ8WXS3 180 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 C2orf88Q9BSF0 95 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 HSPB8Q9UJY1 196 aa4.19□□□□□ -1.74
DEPDC4-210ENST00000551642 TRAV12-1A0A0B4J245 112 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 S100A6P06703 90 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 UBE2D1P51668 147 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 HNRNPA3P51991 378 aaKnown RBP4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 KRTAP26-1Q6PEX3 210 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 Q75L30 129 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 IFI27L1Q96BM0 104 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 CST9LQ9H4G1 147 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 Q9HAA7 133 aa4.18□□□□□ -1.74
DEPDC4-210ENST00000551642 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 IGKV2D-24A0A075B6R9 120 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 TRAV13-1A0A0B4J241 112 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 IGKV3OR2-268A0A0C4DH90 116 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 C5orf52A6NGY3 159 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 SEC11AP67812 179 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 HIST3H2BBQ8N257 126 aa4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 CHCHD10Q8WYQ3 142 aaPredicted RBP4.17□□□□□ -1.74
DEPDC4-210ENST00000551642 IGHV3OR16-9A0A0B4J2B5 98 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 TINCRA0A1B0GVN0 87 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 PSCAO43653 123 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 FABP4P15090 132 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 XCL1P47992 114 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 SNRPEP62304 92 aaKnown RBP4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 MAP1LC3CQ9BXW4 147 aa4.16□□□□□ -1.74
DEPDC4-210ENST00000551642 A0A0J9YXV3 536 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 IGLC3P0DOY3 106 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 S100A2P29034 98 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 HERVK_113P63121 156 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 COX6A2Q02221 97 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 HIST1H2BLQ99880 126 aa4.15□□□□□ -1.75
DEPDC4-210ENST00000551642 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 A0A087WZ39 114 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 LRCOL1A6NCL2 159 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 F8VRH5 84 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 COX7A2LO14548 114 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 C3orf79P0CE67 100 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 PET117Q6UWS5 81 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 GEMIN7Q9H840 131 aaKnown RBP4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 CHTOPQ9Y3Y2 248 aaKnown RBP4.14□□□□□ -1.75
DEPDC4-210ENST00000551642 A0A087WTM6 91 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 IGHV1-58A0A0C4DH39 117 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 APOMO95445 188 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 PLNP26678 52 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 LINC01545Q5VT33 79 aa4.13□□□□□ -1.75
DEPDC4-210ENST00000551642 CFAP161Q6P656 301 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms