RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 CKS1BP61024 79 aa11.05□□□□□ -0.64
BRF1-217ENST00000550375 APOBP04114 4563 aaKnown RBP11.05□□□□□ -0.64
BRF1-217ENST00000550375 HIST3H2BBQ8N257 126 aa11.04□□□□□ -0.64
BRF1-217ENST00000550375 DPM2O94777 84 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 C3orf79P0CE67 100 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 S100A2P29034 98 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 KRTDAPP60985 99 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 C6orf48Q9UBA6 75 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 TMEM223A0PJW6 202 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 PANO1I0J062 215 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 CDK2AP2O75956 126 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 PLNP26678 52 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 SNRPEP62304 92 aaKnown RBP11.03□□□□□ -0.64
BRF1-217ENST00000550375 Q6ZSA8 131 aa11.03□□□□□ -0.64
BRF1-217ENST00000550375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.03□□□□□ -0.64
BRF1-217ENST00000550375 RYR1P21817 5038 aa11.02□□□□□ -0.65
BRF1-217ENST00000550375 IGKV2-24A0A0C4DH68 120 aa11.02□□□□□ -0.65
BRF1-217ENST00000550375 IGKCP01834 107 aa11.02□□□□□ -0.65
BRF1-217ENST00000550375 XGP55808 180 aa11.02□□□□□ -0.65
BRF1-217ENST00000550375 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
BRF1-217ENST00000550375 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
BRF1-217ENST00000550375 A0A096LNI7 61 aa11.01□□□□□ -0.65
BRF1-217ENST00000550375 LOC107984640A0A0U1RRK4 108 aa11.01□□□□□ -0.65
BRF1-217ENST00000550375 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
BRF1-217ENST00000550375 TRBV30A0A0K0K1B3 111 aa11□□□□□ -0.65
BRF1-217ENST00000550375 CXCL5P42830 114 aa11□□□□□ -0.65
BRF1-217ENST00000550375 RPL18AQ02543 176 aaKnown RBP11□□□□□ -0.65
BRF1-217ENST00000550375 GAGE2BQ13066 116 aa11□□□□□ -0.65
BRF1-217ENST00000550375 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
BRF1-217ENST00000550375 HIST1H2BLQ99880 126 aa11□□□□□ -0.65
BRF1-217ENST00000550375 PKIGQ9Y2B9 76 aa11□□□□□ -0.65
BRF1-217ENST00000550375 LINC01545Q5VT33 79 aa10.99□□□□□ -0.65
BRF1-217ENST00000550375 SCXQ7RTU7 201 aa10.98□□□□□ -0.65
BRF1-217ENST00000550375 C5orf52A6NGY3 159 aa10.97□□□□□ -0.65
BRF1-217ENST00000550375 MAJINQ3KP22 176 aa10.97□□□□□ -0.65
BRF1-217ENST00000550375 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
BRF1-217ENST00000550375 PTTG1IPP53801 180 aa10.96□□□□□ -0.65
BRF1-217ENST00000550375 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
BRF1-217ENST00000550375 KRTAP4-5Q9BYR2 181 aa10.96□□□□□ -0.65
BRF1-217ENST00000550375 HERVK_113P61574 105 aa10.95□□□□□ -0.66
BRF1-217ENST00000550375 CIRBPQ14011 172 aaKnown RBP10.95□□□□□ -0.66
BRF1-217ENST00000550375 HSPG2P98160 4391 aa10.95□□□□□ -0.66
BRF1-217ENST00000550375 C20orf202A1L168 122 aa10.94□□□□□ -0.66
BRF1-217ENST00000550375 TLX1NBP0CAT3 122 aa10.94□□□□□ -0.66
BRF1-217ENST00000550375 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
BRF1-217ENST00000550375 Q6ZRP5 223 aa10.94□□□□□ -0.66
BRF1-217ENST00000550375 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
BRF1-217ENST00000550375 TMA7Q9Y2S6 64 aaKnown RBP10.94□□□□□ -0.66
BRF1-217ENST00000550375 NDUFC2-KCTD14E9PQ53 114 aa10.93□□□□□ -0.66
BRF1-217ENST00000550375 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
BRF1-217ENST00000550375 ZNF625Q96I27 306 aaPredicted RBP10.93□□□□□ -0.66
BRF1-217ENST00000550375 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
BRF1-217ENST00000550375 A0A087WYN8 130 aa10.92□□□□□ -0.66
BRF1-217ENST00000550375 LEPROTO15243 131 aa10.92□□□□□ -0.66
BRF1-217ENST00000550375 STPG4Q8N801 248 aa10.92□□□□□ -0.66
BRF1-217ENST00000550375 ABCA13Q86UQ4 5058 aa10.91□□□□□ -0.66
BRF1-217ENST00000550375 TSPEAR-AS2P59090 65 aa10.9□□□□□ -0.66
BRF1-217ENST00000550375 ATOH7Q8N100 152 aa10.9□□□□□ -0.66
BRF1-217ENST00000550375 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.66
BRF1-217ENST00000550375 PFN2P35080 140 aa10.9□□□□□ -0.67
BRF1-217ENST00000550375 J3QQQ9 107 aa10.89□□□□□ -0.67
BRF1-217ENST00000550375 SFTA2Q6UW10 78 aa10.89□□□□□ -0.67
BRF1-217ENST00000550375 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
BRF1-217ENST00000550375 NDUFA12Q9UI09 145 aa10.89□□□□□ -0.67
BRF1-217ENST00000550375 E9PLD3 99 aa10.88□□□□□ -0.67
BRF1-217ENST00000550375 LGALS3P17931 250 aaKnown RBP10.88□□□□□ -0.67
BRF1-217ENST00000550375 ERG28Q9UKR5 140 aa10.88□□□□□ -0.67
BRF1-217ENST00000550375 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
BRF1-217ENST00000550375 XAGE1AQ9HD64 81 aa10.87□□□□□ -0.67
BRF1-217ENST00000550375 MYMXA0A1B0GTQ4 84 aa10.86□□□□□ -0.67
BRF1-217ENST00000550375 FAM168BA1KXE4 195 aa10.86□□□□□ -0.67
BRF1-217ENST00000550375 C9orf129Q5T035 196 aaKnown RBP10.86□□□□□ -0.67
BRF1-217ENST00000550375 A0A0U1RRA0 63 aa10.85□□□□□ -0.67
BRF1-217ENST00000550375 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
BRF1-217ENST00000550375 Q8N1X5 172 aa10.85□□□□□ -0.67
BRF1-217ENST00000550375 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
BRF1-217ENST00000550375 AKR1D1P51857 326 aa10.84□□□□□ -0.67
BRF1-217ENST00000550375 LINC00158P58513 81 aa10.84□□□□□ -0.67
BRF1-217ENST00000550375 HERV-K104P63124 156 aa10.84□□□□□ -0.67
BRF1-217ENST00000550375 MEIG1Q5JSS6 88 aa10.84□□□□□ -0.67
BRF1-217ENST00000550375 IGKV2D-26A0A0A0MRZ7 120 aa10.83□□□□□ -0.68
BRF1-217ENST00000550375 NMUP48645 174 aa10.83□□□□□ -0.68
BRF1-217ENST00000550375 COX17Q14061 63 aa10.83□□□□□ -0.68
BRF1-217ENST00000550375 FAM19A5Q7Z5A7 132 aaPredicted RBP10.83□□□□□ -0.68
BRF1-217ENST00000550375 FAT1Q14517 4588 aa10.82□□□□□ -0.68
BRF1-217ENST00000550375 SMIM13P0DJ93 91 aa10.82□□□□□ -0.68
BRF1-217ENST00000550375 ANKRD39Q53RE8 183 aa10.82□□□□□ -0.68
BRF1-217ENST00000550375 FAM229AH3BQW9 127 aa10.81□□□□□ -0.68
BRF1-217ENST00000550375 Q5VSD8 79 aa10.81□□□□□ -0.68
BRF1-217ENST00000550375 SND1-IT1Q9HBX3 110 aa10.8□□□□□ -0.68
BRF1-217ENST00000550375 EPM2AB3EWF7 344 aa10.79□□□□□ -0.68
BRF1-217ENST00000550375 SERTAD4-AS1Q5TG53 156 aa10.79□□□□□ -0.68
BRF1-217ENST00000550375 KRTAP7-1Q8IUC3 87 aa10.79□□□□□ -0.68
BRF1-217ENST00000550375 TTTY13Q9BZ97 58 aa10.79□□□□□ -0.68
BRF1-217ENST00000550375 PHF5AQ7RTV0 110 aaKnown RBP10.78□□□□□ -0.68
BRF1-217ENST00000550375 ZNF815PA8K554 130 aa10.77□□□□□ -0.68
BRF1-217ENST00000550375 LINC00587B1AMM8 73 aa10.77□□□□□ -0.68
BRF1-217ENST00000550375 C7orf33Q8WU49 177 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms