RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ATOX1O00244 68 aa9.64□□□□□ -0.87
HDAC7-228ENST00000548938 NCR3O14931 201 aa9.63□□□□□ -0.87
HDAC7-228ENST00000548938 SLPIP03973 132 aa9.63□□□□□ -0.87
HDAC7-228ENST00000548938 OBSCN-AS1Q96MR7 158 aa9.63□□□□□ -0.87
HDAC7-228ENST00000548938 CYSTM1Q9H1C7 97 aa9.63□□□□□ -0.87
HDAC7-228ENST00000548938 TRGV2A0A075B6R0 118 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 A0A087WVE0 104 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 H0YGX0 51 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 IGHV3OR16-9A0A0B4J2B5 98 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 hADV29S1A0JD25 119 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 CRYGAP11844 174 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 C11orf44Q8N8P7 122 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 PAX4O43316 350 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 RPL18AQ02543 176 aaKnown RBP9.62□□□□□ -0.87
HDAC7-228ENST00000548938 OR13C6PQ8NH95 151 aa9.62□□□□□ -0.87
HDAC7-228ENST00000548938 A0A1W2PRX2 142 aa9.61□□□□□ -0.87
HDAC7-228ENST00000548938 PLAC8L1A1L4L8 177 aa9.61□□□□□ -0.87
HDAC7-228ENST00000548938 Q6JHZ5 121 aa9.61□□□□□ -0.87
HDAC7-228ENST00000548938 C11orf68Q9H3H3 251 aaKnown RBP9.61□□□□□ -0.87
HDAC7-228ENST00000548938 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
HDAC7-228ENST00000548938 GIG44P09565 113 aaPredicted RBP9.6□□□□□ -0.87
HDAC7-228ENST00000548938 A0A1B0GX51 115 aa9.6□□□□□ -0.87
HDAC7-228ENST00000548938 TMEM86BQ8N661 226 aa9.6□□□□□ -0.87
HDAC7-228ENST00000548938 WFDC10AQ9H1F0 79 aa9.59□□□□□ -0.87
HDAC7-228ENST00000548938 A0A087WZ39 114 aa9.59□□□□□ -0.87
HDAC7-228ENST00000548938 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
HDAC7-228ENST00000548938 ESM1Q9NQ30 184 aa9.59□□□□□ -0.87
HDAC7-228ENST00000548938 ANK3Q12955 4377 aaKnown RBP9.59□□□□□ -0.87
HDAC7-228ENST00000548938 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
HDAC7-228ENST00000548938 TRBV6-4A0A1B0GX49 114 aa9.58□□□□□ -0.88
HDAC7-228ENST00000548938 SS18Q15532 418 aa9.58□□□□□ -0.88
HDAC7-228ENST00000548938 TRBV6-8A0A0A6YYG3 113 aa9.58□□□□□ -0.88
HDAC7-228ENST00000548938 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
HDAC7-228ENST00000548938 J3KT08 172 aa9.57□□□□□ -0.88
HDAC7-228ENST00000548938 C16orf74Q96GX8 76 aa9.57□□□□□ -0.88
HDAC7-228ENST00000548938 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
HDAC7-228ENST00000548938 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
HDAC7-228ENST00000548938 ORMDL1Q9P0S3 153 aa9.56□□□□□ -0.88
HDAC7-228ENST00000548938 LY6G6DO95868 133 aa9.55□□□□□ -0.88
HDAC7-228ENST00000548938 USP17L23D6RBM5 183 aa9.55□□□□□ -0.88
HDAC7-228ENST00000548938 SERP2Q8N6R1 65 aa9.55□□□□□ -0.88
HDAC7-228ENST00000548938 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
HDAC7-228ENST00000548938 HIVEP2P31629 2446 aa9.54□□□□□ -0.88
HDAC7-228ENST00000548938 LINC00959A0A1B0GUT2 108 aa9.54□□□□□ -0.88
HDAC7-228ENST00000548938 CCL24O00175 119 aa9.54□□□□□ -0.88
HDAC7-228ENST00000548938 FHL2Q14192 279 aa9.54□□□□□ -0.88
HDAC7-228ENST00000548938 SMR3AQ99954 134 aa9.54□□□□□ -0.88
HDAC7-228ENST00000548938 UPK3BQ9BT76 320 aa9.54□□□□□ -0.88
HDAC7-228ENST00000548938 XCL1P47992 114 aa9.53□□□□□ -0.88
HDAC7-228ENST00000548938 F8WDY8 70 aa9.53□□□□□ -0.88
HDAC7-228ENST00000548938 CCKP06307 115 aa9.52□□□□□ -0.89
HDAC7-228ENST00000548938 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
HDAC7-228ENST00000548938 KIR2DL5BQ8NHK3 375 aa9.52□□□□□ -0.89
HDAC7-228ENST00000548938 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
HDAC7-228ENST00000548938 HILS1P60008 231 aa9.51□□□□□ -0.89
HDAC7-228ENST00000548938 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
HDAC7-228ENST00000548938 CLPSL2Q6UWE3 100 aa9.51□□□□□ -0.89
HDAC7-228ENST00000548938 WFDC9Q8NEX5 89 aa9.5□□□□□ -0.89
HDAC7-228ENST00000548938 CSNK1G2-AS1Q8NCQ2 148 aa9.5□□□□□ -0.89
HDAC7-228ENST00000548938 LINC00167Q96N53 147 aa9.5□□□□□ -0.89
HDAC7-228ENST00000548938 RNASE1P07998 156 aaKnown RBP9.49□□□□□ -0.89
HDAC7-228ENST00000548938 TMEM258P61165 79 aa9.49□□□□□ -0.89
HDAC7-228ENST00000548938 RPS28P62857 69 aaKnown RBP9.48□□□□□ -0.89
HDAC7-228ENST00000548938 Q8N814 137 aa9.48□□□□□ -0.89
HDAC7-228ENST00000548938 DSCR8Q96T75 97 aa9.48□□□□□ -0.89
HDAC7-228ENST00000548938 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
HDAC7-228ENST00000548938 DEFB130BP0DP73 79 aa9.47□□□□□ -0.89
HDAC7-228ENST00000548938 DEFB130AP0DP74 79 aa9.47□□□□□ -0.89
HDAC7-228ENST00000548938 Q8IZM0 81 aa9.47□□□□□ -0.89
HDAC7-228ENST00000548938 LINC01006Q8NI28 216 aa9.47□□□□□ -0.89
HDAC7-228ENST00000548938 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
HDAC7-228ENST00000548938 DPH3Q96FX2 82 aa9.47□□□□□ -0.89
HDAC7-228ENST00000548938 FN1P02751 2386 aaKnown RBP9.47□□□□□ -0.89
HDAC7-228ENST00000548938 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
HDAC7-228ENST00000548938 FAM19A1Q7Z5A9 133 aa9.46□□□□□ -0.89
HDAC7-228ENST00000548938 OXTP01178 125 aa9.46□□□□□ -0.9
HDAC7-228ENST00000548938 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
HDAC7-228ENST00000548938 GYPEP15421 78 aa9.45□□□□□ -0.9
HDAC7-228ENST00000548938 NBEAL2Q6ZNJ1 2754 aa9.45□□□□□ -0.9
HDAC7-228ENST00000548938 S100A7L2Q5SY68 101 aa9.45□□□□□ -0.9
HDAC7-228ENST00000548938 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
HDAC7-228ENST00000548938 C16orf95Q9H693 158 aa9.45□□□□□ -0.9
HDAC7-228ENST00000548938 A0A096LPF7 62 aa9.44□□□□□ -0.9
HDAC7-228ENST00000548938 TMEM256-PLSCR3K7ERE1 68 aa9.44□□□□□ -0.9
HDAC7-228ENST00000548938 GHRHP01286 108 aa9.44□□□□□ -0.9
HDAC7-228ENST00000548938 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
HDAC7-228ENST00000548938 ATP5EP2Q5VTU8 51 aa9.43□□□□□ -0.9
HDAC7-228ENST00000548938 Q8NDZ9 215 aa9.43□□□□□ -0.9
HDAC7-228ENST00000548938 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
HDAC7-228ENST00000548938 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
HDAC7-228ENST00000548938 C6orf99Q4VX62 202 aa9.42□□□□□ -0.9
HDAC7-228ENST00000548938 HIVEP1P15822 2718 aa9.42□□□□□ -0.9
HDAC7-228ENST00000548938 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
HDAC7-228ENST00000548938 NSD1Q96L73 2696 aaPredicted RBP9.42□□□□□ -0.9
HDAC7-228ENST00000548938 A0A1B0GUV1 79 aa9.41□□□□□ -0.9
HDAC7-228ENST00000548938 NDUFC2O95298 119 aa9.41□□□□□ -0.9
HDAC7-228ENST00000548938 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
HDAC7-228ENST00000548938 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
HDAC7-228ENST00000548938 IGLV10-54A0A075B6I4 117 aa9.4□□□□□ -0.9
HDAC7-228ENST00000548938 UBL5Q9BZL1 73 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms