RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 PMVKQ15126 192 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 MAJINQ3KP22 176 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 PDZD11Q5EBL8 140 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 BAGE3Q86Y29 109 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 CDKN2A-AS1Q9UH64 79 aa5.65□□□□□ -1.5
SMARCC2-205ENST00000548130 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.51
SMARCC2-205ENST00000548130 NDUFA1O15239 70 aa5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 GAGE2BQ13066 116 aa5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 UNQ6190/PRO20217Q6UXQ8 127 aa5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 LINC01561Q8N1V8 128 aa5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 LINC00469Q8N7U9 141 aa5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 CHCHD1Q96BP2 118 aaKnown RBP5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 PACRGQ96M98 296 aaPredicted RBP5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 TOMM7Q9P0U1 55 aa5.64□□□□□ -1.51
SMARCC2-205ENST00000548130 LOC107984640A0A0U1RRK4 108 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 TINCRA0A1B0GVN0 87 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 ATP5LO75964 103 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 C2orf82Q6UX34 121 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 KRTAP4-11Q9BYQ6 195 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 MRPL35Q9NZE8 188 aaKnown RBP5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 C6orf48Q9UBA6 75 aa5.63□□□□□ -1.51
SMARCC2-205ENST00000548130 F8WDY8 70 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 HSBP1O75506 76 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 PRSS2P07478 247 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 PTTG1IPP53801 180 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 FAM19A2Q8N3H0 131 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 STPG4Q8N801 248 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 PLAC8Q9NZF1 115 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
SMARCC2-205ENST00000548130 IGLV5-45A0A087WSX0 123 aa5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 SMIM1B2RUZ4 78 aa5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 SERF1AO75920 110 aa5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 SPINK8P0C7L1 97 aa5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 IGLC3P0DOY3 106 aa5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 RNF151Q2KHN1 245 aa5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 FLG2Q5D862 2391 aaPredicted RBP5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 LINC00474Q9P2X8 69 aa5.61□□□□□ -1.51
SMARCC2-205ENST00000548130 A0A1W2PNN7 141 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 NUPR1O60356 82 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 ZNF22P17026 224 aaPredicted RBP5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 CKS1BP61024 79 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 RPL37AP61513 92 aaKnown RBP5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 GAGE2EQ4V326 116 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 C9orf116Q5BN46 136 aaPredicted RBP5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 C6orf226Q5I0X4 101 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 Q8IZM0 81 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 IFI27L1Q96BM0 104 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 GAGE2DQ9UEU5 116 aa5.6□□□□□ -1.51
SMARCC2-205ENST00000548130 TRBV30A0A0K0K1B3 111 aa5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 C11orf86A6NJI1 115 aa5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 H3BRM9 83 aa5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 Q6ZRP5 223 aa5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 COX7B2Q8TF08 81 aa5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 CHTOPQ9Y3Y2 248 aaKnown RBP5.59□□□□□ -1.51
SMARCC2-205ENST00000548130 H0Y8G0 127 aa5.58□□□□□ -1.52
SMARCC2-205ENST00000548130 TLX1NBP0CAT3 122 aa5.58□□□□□ -1.52
SMARCC2-205ENST00000548130 S100A1P23297 94 aa5.58□□□□□ -1.52
SMARCC2-205ENST00000548130 TRAV12-1A0A0B4J245 112 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BKO60814 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 LEPROTL1O95214 131 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BJP06899 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BOP23527 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BBP33778 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 CXCL5P42830 114 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BDP58876 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BCP62807 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST2H2BEQ16778 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 TMEM170BQ5T4T1 132 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 C7orf33Q8WU49 177 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BHQ93079 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BNQ99877 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 HIST1H2BMQ99879 126 aa5.57□□□□□ -1.52
SMARCC2-205ENST00000548130 IGLV5-39A0A0G2JS06 123 aa5.56□□□□□ -1.52
SMARCC2-205ENST00000548130 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
SMARCC2-205ENST00000548130 NDUFC2-KCTD14E9PQ53 114 aa5.56□□□□□ -1.52
SMARCC2-205ENST00000548130 F8VRH5 84 aa5.56□□□□□ -1.52
SMARCC2-205ENST00000548130 FABP4P15090 132 aa5.56□□□□□ -1.52
SMARCC2-205ENST00000548130 VPS13BQ7Z7G8 4022 aa5.56□□□□□ -1.52
SMARCC2-205ENST00000548130 HNRNPA3P51991 378 aaKnown RBP5.55□□□□□ -1.52
SMARCC2-205ENST00000548130 C9orf129Q5T035 196 aaKnown RBP5.55□□□□□ -1.52
SMARCC2-205ENST00000548130 PHF5AQ7RTV0 110 aaKnown RBP5.55□□□□□ -1.52
SMARCC2-205ENST00000548130 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
SMARCC2-205ENST00000548130 HSPB8Q9UJY1 196 aa5.55□□□□□ -1.52
SMARCC2-205ENST00000548130 PLA2G2DQ9UNK4 145 aa5.55□□□□□ -1.52
SMARCC2-205ENST00000548130 ODF1Q14990 250 aa5.54□□□□□ -1.52
SMARCC2-205ENST00000548130 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
SMARCC2-205ENST00000548130 TMEM223A0PJW6 202 aa5.53□□□□□ -1.52
SMARCC2-205ENST00000548130 PRR3P79522 188 aaKnown RBP5.53□□□□□ -1.52
SMARCC2-205ENST00000548130 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
SMARCC2-205ENST00000548130 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms