RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SMR3BP02814 79 aaPredicted RBP7.9□□□□□ -1.14
HDAC7-226ENST00000547259 FUSP35637 526 aaKnown RBP eCLIP7.9□□□□□ -1.14
HDAC7-226ENST00000547259 SPAG11BQ08648 103 aa7.9□□□□□ -1.14
HDAC7-226ENST00000547259 GVQW2A0A096LPI5 108 aaPredicted RBP7.89□□□□□ -1.15
HDAC7-226ENST00000547259 SMIM1B2RUZ4 78 aa7.89□□□□□ -1.15
HDAC7-226ENST00000547259 J3QL48 77 aa7.89□□□□□ -1.15
HDAC7-226ENST00000547259 ZNF561-AS1K7EIQ3 104 aa7.89□□□□□ -1.15
HDAC7-226ENST00000547259 Q8N814 137 aa7.89□□□□□ -1.15
HDAC7-226ENST00000547259 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.88□□□□□ -1.15
HDAC7-226ENST00000547259 TMEM223A0PJW6 202 aa7.88□□□□□ -1.15
HDAC7-226ENST00000547259 SCGB1D1O95968 90 aa7.88□□□□□ -1.15
HDAC7-226ENST00000547259 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
HDAC7-226ENST00000547259 PRSS2P07478 247 aa7.88□□□□□ -1.15
HDAC7-226ENST00000547259 AKR1D1P51857 326 aa7.88□□□□□ -1.15
HDAC7-226ENST00000547259 HERVK_113P61574 105 aa7.88□□□□□ -1.15
HDAC7-226ENST00000547259 TOMM7Q9P0U1 55 aa7.88□□□□□ -1.15
HDAC7-226ENST00000547259 ATOH7Q8N100 152 aa7.87□□□□□ -1.15
HDAC7-226ENST00000547259 COX7B2Q8TF08 81 aa7.86□□□□□ -1.15
HDAC7-226ENST00000547259 LINC00526Q96FQ7 95 aa7.86□□□□□ -1.15
HDAC7-226ENST00000547259 IGLV5-39A0A0G2JS06 123 aa7.85□□□□□ -1.15
HDAC7-226ENST00000547259 Q8IZM0 81 aa7.85□□□□□ -1.15
HDAC7-226ENST00000547259 CAMK2N2Q96S95 79 aa7.85□□□□□ -1.15
HDAC7-226ENST00000547259 CKS1BP61024 79 aa7.84□□□□□ -1.15
HDAC7-226ENST00000547259 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
HDAC7-226ENST00000547259 C2orf48Q96LS8 159 aa7.84□□□□□ -1.15
HDAC7-226ENST00000547259 NDUFA1O15239 70 aa7.83□□□□□ -1.16
HDAC7-226ENST00000547259 LEPROTO15243 131 aa7.83□□□□□ -1.16
HDAC7-226ENST00000547259 CXCL5P42830 114 aa7.83□□□□□ -1.16
HDAC7-226ENST00000547259 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
HDAC7-226ENST00000547259 STPG4Q8N801 248 aa7.83□□□□□ -1.16
HDAC7-226ENST00000547259 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.82□□□□□ -1.16
HDAC7-226ENST00000547259 HSBP1L1C9JCN9 74 aa7.82□□□□□ -1.16
HDAC7-226ENST00000547259 F8WDY8 70 aa7.82□□□□□ -1.16
HDAC7-226ENST00000547259 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
HDAC7-226ENST00000547259 SYCNQ0VAF6 134 aa7.82□□□□□ -1.16
HDAC7-226ENST00000547259 JOSD1Q15040 202 aaPredicted RBP7.82□□□□□ -1.16
HDAC7-226ENST00000547259 C2orf82Q6UX34 121 aa7.82□□□□□ -1.16
HDAC7-226ENST00000547259 PLEKHB2Q96CS7 222 aa7.82□□□□□ -1.16
HDAC7-226ENST00000547259 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
HDAC7-226ENST00000547259 KRTAP29-1A8MX34 341 aaPredicted RBP7.81□□□□□ -1.16
HDAC7-226ENST00000547259 E9PLD3 99 aa7.81□□□□□ -1.16
HDAC7-226ENST00000547259 LGALS3P17931 250 aaKnown RBP7.81□□□□□ -1.16
HDAC7-226ENST00000547259 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
HDAC7-226ENST00000547259 Q6ZRU5 148 aa7.81□□□□□ -1.16
HDAC7-226ENST00000547259 J3QQQ9 107 aa7.8□□□□□ -1.16
HDAC7-226ENST00000547259 SLPIP03973 132 aa7.8□□□□□ -1.16
HDAC7-226ENST00000547259 TSPEAR-AS2P59090 65 aa7.8□□□□□ -1.16
HDAC7-226ENST00000547259 UNQ6190/PRO20217Q6UXQ8 127 aa7.8□□□□□ -1.16
HDAC7-226ENST00000547259 NMUP48645 174 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 HAMPP81172 84 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 MAJINQ3KP22 176 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 PYY3Q5JQD4 70 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 C10orf25Q5T742 122 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 Q6ZSA8 131 aa7.79□□□□□ -1.16
HDAC7-226ENST00000547259 IGKV2D-26A0A0A0MRZ7 120 aa7.78□□□□□ -1.16
HDAC7-226ENST00000547259 TRBV30A0A0K0K1B3 111 aa7.78□□□□□ -1.16
HDAC7-226ENST00000547259 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
HDAC7-226ENST00000547259 FAM30AQ9NZY2 134 aa7.78□□□□□ -1.16
HDAC7-226ENST00000547259 C6orf48Q9UBA6 75 aa7.78□□□□□ -1.16
HDAC7-226ENST00000547259 NDUFA12Q9UI09 145 aa7.78□□□□□ -1.16
HDAC7-226ENST00000547259 DNAH8Q96JB1 4490 aa7.77□□□□□ -1.17
HDAC7-226ENST00000547259 MYMXA0A1B0GTQ4 84 aa7.77□□□□□ -1.17
HDAC7-226ENST00000547259 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
HDAC7-226ENST00000547259 C9orf163Q8N9P6 203 aa7.77□□□□□ -1.17
HDAC7-226ENST00000547259 VAMP8Q9BV40 100 aa7.77□□□□□ -1.17
HDAC7-226ENST00000547259 RNF151Q2KHN1 245 aa7.76□□□□□ -1.17
HDAC7-226ENST00000547259 LINC01620Q4KN68 170 aa7.76□□□□□ -1.17
HDAC7-226ENST00000547259 ZNF625Q96I27 306 aaPredicted RBP7.76□□□□□ -1.17
HDAC7-226ENST00000547259 PKIGQ9Y2B9 76 aa7.76□□□□□ -1.17
HDAC7-226ENST00000547259 OXTP01178 125 aa7.75□□□□□ -1.17
HDAC7-226ENST00000547259 HERV-K104P63124 156 aa7.75□□□□□ -1.17
HDAC7-226ENST00000547259 SPATA45Q537H7 98 aa7.75□□□□□ -1.17
HDAC7-226ENST00000547259 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
HDAC7-226ENST00000547259 PAM16Q9Y3D7 125 aa7.75□□□□□ -1.17
HDAC7-226ENST00000547259 LOC107984640A0A0U1RRK4 108 aa7.74□□□□□ -1.17
HDAC7-226ENST00000547259 ZNF815PA8K554 130 aa7.74□□□□□ -1.17
HDAC7-226ENST00000547259 RPL18AQ02543 176 aaKnown RBP7.74□□□□□ -1.17
HDAC7-226ENST00000547259 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
HDAC7-226ENST00000547259 TTTY13Q9BZ97 58 aa7.74□□□□□ -1.17
HDAC7-226ENST00000547259 ERG28Q9UKR5 140 aa7.74□□□□□ -1.17
HDAC7-226ENST00000547259 SMIM6P0DI80 62 aa7.73□□□□□ -1.17
HDAC7-226ENST00000547259 PFN2P35080 140 aa7.72□□□□□ -1.17
HDAC7-226ENST00000547259 PCP2Q8IVA1 136 aa7.72□□□□□ -1.17
HDAC7-226ENST00000547259 A0A0J9YXY3 114 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 NDUFC2-KCTD14E9PQ53 114 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 TLX1NBP0CAT3 122 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 LINC00158P58513 81 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 S100A12P80511 92 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 SCXQ7RTU7 201 aa7.71□□□□□ -1.18
HDAC7-226ENST00000547259 A0A096LNI7 61 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 IGKV2-24A0A0C4DH68 120 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 A0A0U1RRA0 63 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 LINC00587B1AMM8 73 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 SMIM13P0DJ93 91 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 COX17Q14061 63 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 GAGE2EQ4V326 116 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms