RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TMEM218A2RU14 115 aa5.74□□□□□ -1.49
YBX3-218ENST00000546298 IGLV7-43P04211 117 aa5.74□□□□□ -1.49
YBX3-218ENST00000546298 S100PP25815 95 aa5.74□□□□□ -1.49
YBX3-218ENST00000546298 UBE2BP63146 152 aa5.74□□□□□ -1.49
YBX3-218ENST00000546298 COX19Q49B96 90 aa5.74□□□□□ -1.49
YBX3-218ENST00000546298 LINC00173Q6ZV60 143 aa5.74□□□□□ -1.49
YBX3-218ENST00000546298 TOMM7Q9P0U1 55 aa5.74□□□□□ -1.49
YBX3-218ENST00000546298 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 FAM168BA1KXE4 195 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 M0QXV9 152 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 KIAA1644Q3SXP7 199 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 ZC2HC1BQ5TFG8 222 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 Q8IZM0 81 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 TOMM6Q96B49 74 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 SCGB3A1Q96QR1 104 aa5.73□□□□□ -1.49
YBX3-218ENST00000546298 ALKBH7Q9BT30 221 aaPredicted RBP5.73□□□□□ -1.49
YBX3-218ENST00000546298 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
YBX3-218ENST00000546298 CXCL5P42830 114 aa5.72□□□□□ -1.49
YBX3-218ENST00000546298 ERASQ7Z444 233 aa5.72□□□□□ -1.49
YBX3-218ENST00000546298 KRTAP4-12Q9BQ66 201 aa5.72□□□□□ -1.49
YBX3-218ENST00000546298 SEC11CQ9BY50 192 aa5.72□□□□□ -1.49
YBX3-218ENST00000546298 GNB1LQ9BYB4 327 aa5.72□□□□□ -1.49
YBX3-218ENST00000546298 ADCYAP1P18509 176 aa5.71□□□□□ -1.5
YBX3-218ENST00000546298 S100A1P23297 94 aa5.71□□□□□ -1.5
YBX3-218ENST00000546298 NDUFA5Q16718 116 aa5.71□□□□□ -1.5
YBX3-218ENST00000546298 LBHQ53QV2 105 aaPredicted RBP5.71□□□□□ -1.5
YBX3-218ENST00000546298 C9orf129Q5T035 196 aaKnown RBP5.71□□□□□ -1.5
YBX3-218ENST00000546298 CDKN2A-AS1Q9UH64 79 aa5.71□□□□□ -1.5
YBX3-218ENST00000546298 F8VRH5 84 aa5.7□□□□□ -1.5
YBX3-218ENST00000546298 H0Y9J4 135 aa5.7□□□□□ -1.5
YBX3-218ENST00000546298 ODF1Q14990 250 aa5.7□□□□□ -1.5
YBX3-218ENST00000546298 PDZD11Q5EBL8 140 aa5.7□□□□□ -1.5
YBX3-218ENST00000546298 FA2HQ7L5A8 372 aa5.7□□□□□ -1.5
YBX3-218ENST00000546298 KRTAP7-1Q8IUC3 87 aa5.7□□□□□ -1.5
YBX3-218ENST00000546298 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
YBX3-218ENST00000546298 TINCRA0A1B0GVN0 87 aa5.69□□□□□ -1.5
YBX3-218ENST00000546298 LINC01546A6NGU7 62 aa5.69□□□□□ -1.5
YBX3-218ENST00000546298 IFITM2Q01629 132 aa5.69□□□□□ -1.5
YBX3-218ENST00000546298 KRTAP11-1Q8IUC1 163 aa5.69□□□□□ -1.5
YBX3-218ENST00000546298 SMCO4Q9NRQ5 59 aa5.69□□□□□ -1.5
YBX3-218ENST00000546298 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
YBX3-218ENST00000546298 IGLV5-45A0A087WSX0 123 aa5.68□□□□□ -1.5
YBX3-218ENST00000546298 NUPR1O60356 82 aa5.68□□□□□ -1.5
YBX3-218ENST00000546298 FABP9Q0Z7S8 132 aa5.68□□□□□ -1.5
YBX3-218ENST00000546298 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
YBX3-218ENST00000546298 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
YBX3-218ENST00000546298 XAGE1AQ9HD64 81 aa5.68□□□□□ -1.5
YBX3-218ENST00000546298 SMIM1B2RUZ4 78 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 H3BRM9 83 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 PMVKQ15126 192 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 RHEBQ15382 184 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 COMMD7Q86VX2 200 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 CST9LQ9H4G1 147 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 RPS10P5Q9NQ39 176 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 C22orf24Q9Y442 160 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
YBX3-218ENST00000546298 ZNF861PO60384 105 aa5.66□□□□□ -1.5
YBX3-218ENST00000546298 RPL13AP40429 203 aaKnown RBP5.66□□□□□ -1.5
YBX3-218ENST00000546298 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
YBX3-218ENST00000546298 C10orf91Q5T1B1 145 aa5.65□□□□□ -1.5
YBX3-218ENST00000546298 MRPL55Q7Z7F7 128 aaKnown RBP5.65□□□□□ -1.5
YBX3-218ENST00000546298 CARHSP1Q9Y2V2 147 aaKnown RBP5.65□□□□□ -1.5
YBX3-218ENST00000546298 ATP5LO75964 103 aa5.64□□□□□ -1.51
YBX3-218ENST00000546298 SPINK8P0C7L1 97 aa5.64□□□□□ -1.51
YBX3-218ENST00000546298 RPL28P46779 137 aaKnown RBP5.64□□□□□ -1.51
YBX3-218ENST00000546298 KRTAP1-4P0C5Y4 121 aa5.63□□□□□ -1.51
YBX3-218ENST00000546298 LINC00614P0C842 121 aa5.63□□□□□ -1.51
YBX3-218ENST00000546298 NDUFA6P56556 154 aa5.63□□□□□ -1.51
YBX3-218ENST00000546298 RAB5BP61020 215 aa5.63□□□□□ -1.51
YBX3-218ENST00000546298 TRAPPC1Q9Y5R8 145 aa5.63□□□□□ -1.51
YBX3-218ENST00000546298 BCE1O60756 84 aa5.62□□□□□ -1.51
YBX3-218ENST00000546298 HBDP02042 147 aa5.62□□□□□ -1.51
YBX3-218ENST00000546298 IGLC3P0DOY3 106 aa5.62□□□□□ -1.51
YBX3-218ENST00000546298 NKAPP1Q8N9T2 125 aa5.62□□□□□ -1.51
YBX3-218ENST00000546298 LINC00167Q96N53 147 aa5.62□□□□□ -1.51
YBX3-218ENST00000546298 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
YBX3-218ENST00000546298 IGLV5-37A0A075B6J1 123 aa5.61□□□□□ -1.51
YBX3-218ENST00000546298 A6NJY4 79 aa5.61□□□□□ -1.51
YBX3-218ENST00000546298 C18orf32Q8TCD1 76 aa5.61□□□□□ -1.51
YBX3-218ENST00000546298 IGLV5-39A0A0G2JS06 123 aa5.6□□□□□ -1.51
YBX3-218ENST00000546298 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
YBX3-218ENST00000546298 SNAPINO95295 136 aa5.6□□□□□ -1.51
YBX3-218ENST00000546298 APOC3P02656 99 aa5.6□□□□□ -1.51
YBX3-218ENST00000546298 SFTA2Q6UW10 78 aa5.6□□□□□ -1.51
YBX3-218ENST00000546298 GAGE10A6NGK3 116 aa5.59□□□□□ -1.51
YBX3-218ENST00000546298 ZNF22P17026 224 aaPredicted RBP5.59□□□□□ -1.51
YBX3-218ENST00000546298 PFN2P35080 140 aa5.59□□□□□ -1.51
YBX3-218ENST00000546298 UBE2AP49459 152 aa5.59□□□□□ -1.51
YBX3-218ENST00000546298 RPL24P83731 157 aaKnown RBP5.59□□□□□ -1.51
YBX3-218ENST00000546298 COX17Q14061 63 aa5.59□□□□□ -1.51
YBX3-218ENST00000546298 BAGE3Q86Y29 109 aa5.59□□□□□ -1.51
YBX3-218ENST00000546298 SVBPQ8N300 66 aa5.59□□□□□ -1.51
YBX3-218ENST00000546298 A0A096LNJ9 63 aa5.58□□□□□ -1.52
YBX3-218ENST00000546298 CRYGAP11844 174 aa5.58□□□□□ -1.52
YBX3-218ENST00000546298 TMEM170BQ5T4T1 132 aa5.58□□□□□ -1.52
YBX3-218ENST00000546298 SLC7A5P1Q8MH63 180 aa5.58□□□□□ -1.52
YBX3-218ENST00000546298 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
YBX3-218ENST00000546298 ERG28Q9UKR5 140 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms