RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 NPYP01303 97 aa8.35□□□□□ -1.07
RTN3-214ENST00000545432 SMIM27A0A1W2PRY6 76 aa8.34□□□□□ -1.07
RTN3-214ENST00000545432 D6R8Y8 96 aa8.34□□□□□ -1.07
RTN3-214ENST00000545432 F8VRH5 84 aa8.34□□□□□ -1.07
RTN3-214ENST00000545432 PRSS2P07478 247 aa8.34□□□□□ -1.07
RTN3-214ENST00000545432 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
RTN3-214ENST00000545432 PPBPP02775 128 aa8.33□□□□□ -1.08
RTN3-214ENST00000545432 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
RTN3-214ENST00000545432 C2orf66Q6UXQ4 117 aa8.33□□□□□ -1.08
RTN3-214ENST00000545432 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
RTN3-214ENST00000545432 ALKBH7Q9BT30 221 aaPredicted RBP8.33□□□□□ -1.08
RTN3-214ENST00000545432 hCG_2014768A0A024R1R8 64 aa8.32□□□□□ -1.08
RTN3-214ENST00000545432 NPSP0C0P6 89 aa8.32□□□□□ -1.08
RTN3-214ENST00000545432 UBE2AP49459 152 aa8.32□□□□□ -1.08
RTN3-214ENST00000545432 TOMM7Q9P0U1 55 aa8.32□□□□□ -1.08
RTN3-214ENST00000545432 RAB5AP20339 215 aa8.31□□□□□ -1.08
RTN3-214ENST00000545432 PNRC1Q12796 327 aaPredicted RBP8.31□□□□□ -1.08
RTN3-214ENST00000545432 LINC00337Q8N6G1 96 aa8.31□□□□□ -1.08
RTN3-214ENST00000545432 A0A1B0GXF2 115 aa8.3□□□□□ -1.08
RTN3-214ENST00000545432 SRP19P09132 144 aaKnown RBP8.3□□□□□ -1.08
RTN3-214ENST00000545432 CXCL5P42830 114 aa8.3□□□□□ -1.08
RTN3-214ENST00000545432 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
RTN3-214ENST00000545432 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
RTN3-214ENST00000545432 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
RTN3-214ENST00000545432 GAGE10A6NGK3 116 aa8.29□□□□□ -1.08
RTN3-214ENST00000545432 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
RTN3-214ENST00000545432 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
RTN3-214ENST00000545432 C3orf22Q8N5N4 141 aa8.29□□□□□ -1.08
RTN3-214ENST00000545432 IGIPA6NJ69 53 aa8.28□□□□□ -1.08
RTN3-214ENST00000545432 F8W036 122 aa8.28□□□□□ -1.08
RTN3-214ENST00000545432 RPL23P62829 140 aaKnown RBP8.28□□□□□ -1.08
RTN3-214ENST00000545432 VCX2Q9H322 139 aa8.28□□□□□ -1.08
RTN3-214ENST00000545432 CDKN2A-AS1Q9UH64 79 aa8.28□□□□□ -1.08
RTN3-214ENST00000545432 S100A8P05109 93 aa8.27□□□□□ -1.09
RTN3-214ENST00000545432 HERVK_113P63121 156 aa8.27□□□□□ -1.09
RTN3-214ENST00000545432 SEC11AP67812 179 aa8.26□□□□□ -1.09
RTN3-214ENST00000545432 ADIRFQ15847 76 aa8.26□□□□□ -1.09
RTN3-214ENST00000545432 TMEM136Q6ZRR5 245 aa8.26□□□□□ -1.09
RTN3-214ENST00000545432 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
RTN3-214ENST00000545432 CYSLTR1Q9Y271 337 aa8.26□□□□□ -1.09
RTN3-214ENST00000545432 PRLHP81277 87 aa8.25□□□□□ -1.09
RTN3-214ENST00000545432 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
RTN3-214ENST00000545432 GNB1LQ9BYB4 327 aa8.25□□□□□ -1.09
RTN3-214ENST00000545432 NAT8Q9UHE5 227 aa8.25□□□□□ -1.09
RTN3-214ENST00000545432 LAMTOR2Q9Y2Q5 125 aa8.24□□□□□ -1.09
RTN3-214ENST00000545432 IGKV2-28A0A075B6P5 120 aa8.23□□□□□ -1.09
RTN3-214ENST00000545432 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
RTN3-214ENST00000545432 IGKV2D-28P01615 120 aa8.23□□□□□ -1.09
RTN3-214ENST00000545432 MT1HP80294 61 aa8.23□□□□□ -1.09
RTN3-214ENST00000545432 PEA15Q15121 130 aa8.23□□□□□ -1.09
RTN3-214ENST00000545432 NKAPP1Q8N9T2 125 aa8.23□□□□□ -1.09
RTN3-214ENST00000545432 TMEM126AQ9H061 195 aa8.23□□□□□ -1.09
RTN3-214ENST00000545432 M0R378 163 aa8.22□□□□□ -1.09
RTN3-214ENST00000545432 PDZD11Q5EBL8 140 aa8.22□□□□□ -1.09
RTN3-214ENST00000545432 XP32Q5T750 250 aa8.22□□□□□ -1.09
RTN3-214ENST00000545432 MRPL54Q6P161 138 aaKnown RBP8.22□□□□□ -1.09
RTN3-214ENST00000545432 Q8N8P6 123 aa8.22□□□□□ -1.09
RTN3-214ENST00000545432 IGLV5-45A0A087WSX0 123 aa8.21□□□□□ -1.1
RTN3-214ENST00000545432 K7EMI3 77 aa8.21□□□□□ -1.1
RTN3-214ENST00000545432 SCO1O75880 301 aa8.21□□□□□ -1.1
RTN3-214ENST00000545432 CFC1BP0CG36 223 aa8.21□□□□□ -1.1
RTN3-214ENST00000545432 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
RTN3-214ENST00000545432 SPINK1P00995 79 aa8.2□□□□□ -1.1
RTN3-214ENST00000545432 VPREB1P12018 145 aa8.2□□□□□ -1.1
RTN3-214ENST00000545432 ORMDL2Q53FV1 153 aa8.2□□□□□ -1.1
RTN3-214ENST00000545432 FAM19A1Q7Z5A9 133 aa8.2□□□□□ -1.1
RTN3-214ENST00000545432 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
RTN3-214ENST00000545432 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
RTN3-214ENST00000545432 TMEM238C9JI98 176 aa8.19□□□□□ -1.1
RTN3-214ENST00000545432 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
RTN3-214ENST00000545432 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
RTN3-214ENST00000545432 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
RTN3-214ENST00000545432 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
RTN3-214ENST00000545432 GEMIN7Q9H840 131 aaKnown RBP8.19□□□□□ -1.1
RTN3-214ENST00000545432 CBLN2Q8IUK8 224 aa8.18□□□□□ -1.1
RTN3-214ENST00000545432 MAP1LC3AQ9H492 121 aa8.18□□□□□ -1.1
RTN3-214ENST00000545432 LOC389332A0A1B0GUA5 103 aa8.17□□□□□ -1.1
RTN3-214ENST00000545432 C9JQL5 133 aa8.17□□□□□ -1.1
RTN3-214ENST00000545432 RAB5BP61020 215 aa8.17□□□□□ -1.1
RTN3-214ENST00000545432 TINCRA0A1B0GVN0 87 aa8.16□□□□□ -1.1
RTN3-214ENST00000545432 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
RTN3-214ENST00000545432 Q8NBF4 154 aa8.16□□□□□ -1.1
RTN3-214ENST00000545432 A0A1B0GVG6 124 aa8.15□□□□□ -1.1
RTN3-214ENST00000545432 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.1
RTN3-214ENST00000545432 DAND5Q8N907 189 aa8.15□□□□□ -1.1
RTN3-214ENST00000545432 TOMM6Q96B49 74 aa8.15□□□□□ -1.1
RTN3-214ENST00000545432 G0S2P27469 103 aa8.13□□□□□ -1.11
RTN3-214ENST00000545432 Q8NDZ9 215 aa8.13□□□□□ -1.11
RTN3-214ENST00000545432 RPL24P83731 157 aaKnown RBP8.12□□□□□ -1.11
RTN3-214ENST00000545432 ERASQ7Z444 233 aa8.12□□□□□ -1.11
RTN3-214ENST00000545432 Q8N377 158 aa8.12□□□□□ -1.11
RTN3-214ENST00000545432 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
RTN3-214ENST00000545432 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
RTN3-214ENST00000545432 NXT2Q9NPJ8 142 aaKnown RBP8.12□□□□□ -1.11
RTN3-214ENST00000545432 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
RTN3-214ENST00000545432 LINC00483Q53H64 154 aa8.1□□□□□ -1.11
RTN3-214ENST00000545432 IGLV5-39A0A0G2JS06 123 aa8.09□□□□□ -1.11
RTN3-214ENST00000545432 KRTAP9-7A8MTY7 169 aa8.09□□□□□ -1.11
RTN3-214ENST00000545432 ATP5LO75964 103 aa8.09□□□□□ -1.11
RTN3-214ENST00000545432 SPINK8P0C7L1 97 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms