RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TIMM17AQ99595 171 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 SPANXA1Q9NS26 97 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 A0A087WYN8 130 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 IGIPA6NJ69 53 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 NPSP0C0P6 89 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 C3orf79P0CE67 100 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 CHTF8P0CG12 524 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 RPL37AP61513 92 aaKnown RBP6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 Q6ZUT4 128 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 SPACA4Q8TDM5 124 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 FAM104AQ969W3 186 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 LINC00526Q96FQ7 95 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 OPRPNQ99935 248 aaPredicted RBP6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PYGO1Q9Y3Y4 419 aa6.19□□□□□ -1.42
TNFRSF1A-214ENST00000543048 C20orf202A1L168 122 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 SYS1-DBNDD2H3BUS1 97 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 APOMO95445 188 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 SYCNQ0VAF6 134 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PET117Q6UWS5 81 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 Q6ZN92 141 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 C5orf38Q86SI9 138 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PLAC8Q9NZF1 115 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PKIGQ9Y2B9 76 aa6.18□□□□□ -1.42
TNFRSF1A-214ENST00000543048 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 IGLV4-3A0A075B6K6 122 aa6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 SMIM6P0DI80 62 aa6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 JOSD1Q15040 202 aaPredicted RBP6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 MAJINQ3KP22 176 aa6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PAPPA-AS1Q5QFB9 102 aa6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 HERC1Q15751 4861 aa6.17□□□□□ -1.42
TNFRSF1A-214ENST00000543048 TRAV12-1A0A0B4J245 112 aa6.16□□□□□ -1.42
TNFRSF1A-214ENST00000543048 IGKV2-24A0A0C4DH68 120 aa6.16□□□□□ -1.42
TNFRSF1A-214ENST00000543048 H0Y8G0 127 aa6.16□□□□□ -1.42
TNFRSF1A-214ENST00000543048 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
TNFRSF1A-214ENST00000543048 C2orf48Q96LS8 159 aa6.16□□□□□ -1.42
TNFRSF1A-214ENST00000543048 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
TNFRSF1A-214ENST00000543048 A0A096LNI7 61 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 IGHV3OR16-9A0A0B4J2B5 98 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 SCGB1D1O95968 90 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PMVKQ15126 192 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PYY3Q5JQD4 70 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 LINC01545Q5VT33 79 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 STPG4Q8N801 248 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 CAMK2N2Q96S95 79 aa6.15□□□□□ -1.42
TNFRSF1A-214ENST00000543048 LOC107984640A0A0U1RRK4 108 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 F8WDY8 70 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 ODF1Q14990 250 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 TEX43Q6ZNM6 134 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 Q6ZRU5 148 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 C7orf33Q8WU49 177 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 AMELXQ99217 191 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 VCX2Q9H322 139 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
TNFRSF1A-214ENST00000543048 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 F8VRH5 84 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 OXTP01178 125 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 SPAG11BQ08648 103 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 LINC00242Q5T6M2 205 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 CHTOPQ9Y3Y2 248 aaKnown RBP6.13□□□□□ -1.43
TNFRSF1A-214ENST00000543048 A0A087WZ39 114 aa6.12□□□□□ -1.43
TNFRSF1A-214ENST00000543048 DPM2O94777 84 aa6.12□□□□□ -1.43
TNFRSF1A-214ENST00000543048 PLNP26678 52 aa6.12□□□□□ -1.43
TNFRSF1A-214ENST00000543048 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
TNFRSF1A-214ENST00000543048 GAGE2BQ13066 116 aa6.12□□□□□ -1.43
TNFRSF1A-214ENST00000543048 PMCHL2Q9BQD1 86 aa6.12□□□□□ -1.43
TNFRSF1A-214ENST00000543048 MRPL35Q9NZE8 188 aaKnown RBP6.12□□□□□ -1.43
TNFRSF1A-214ENST00000543048 IGKCP01834 107 aa6.11□□□□□ -1.43
TNFRSF1A-214ENST00000543048 UBE2D1P51668 147 aa6.11□□□□□ -1.43
TNFRSF1A-214ENST00000543048 HNRNPA3P51991 378 aaKnown RBP6.11□□□□□ -1.43
TNFRSF1A-214ENST00000543048 ZC2HC1BQ5TFG8 222 aa6.11□□□□□ -1.43
TNFRSF1A-214ENST00000543048 LINC01561Q8N1V8 128 aa6.11□□□□□ -1.43
TNFRSF1A-214ENST00000543048 A0A0J9YXV3 536 aa6.1□□□□□ -1.43
TNFRSF1A-214ENST00000543048 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
TNFRSF1A-214ENST00000543048 NDUFA1O15239 70 aa6.1□□□□□ -1.43
TNFRSF1A-214ENST00000543048 IGLC3P0DOY3 106 aa6.1□□□□□ -1.43
TNFRSF1A-214ENST00000543048 ATOH7Q8N100 152 aa6.1□□□□□ -1.43
TNFRSF1A-214ENST00000543048 C12orf57Q99622 126 aa6.1□□□□□ -1.43
TNFRSF1A-214ENST00000543048 C11orf86A6NJI1 115 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 SEC11AP67812 179 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 S100A12P80511 92 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 KIAA0087Q14695 138 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 UNQ6190/PRO20217Q6UXQ8 127 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 FAM19A3Q7Z5A8 133 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 LINC00518Q8N0U6 118 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 VAMP8Q9BV40 100 aa6.09□□□□□ -1.43
TNFRSF1A-214ENST00000543048 TINCRA0A1B0GVN0 87 aa6.08□□□□□ -1.44
TNFRSF1A-214ENST00000543048 A0A1W2PNN7 141 aa6.08□□□□□ -1.44
TNFRSF1A-214ENST00000543048 HSBP1L1C9JCN9 74 aa6.08□□□□□ -1.44
TNFRSF1A-214ENST00000543048 RPL18AQ02543 176 aaKnown RBP6.08□□□□□ -1.44
TNFRSF1A-214ENST00000543048 C10orf25Q5T742 122 aa6.08□□□□□ -1.44
TNFRSF1A-214ENST00000543048 TLX1NBP0CAT3 122 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms