RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 IGHV1-58A0A0C4DH39 117 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 LECT2O14960 151 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 Q5XG85 94 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 GAGE2AQ6NT46 116 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 Q6ZTI0 123 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 C9orf85Q96MD7 179 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 NF1P21359 2839 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 ACYP1P07311 99 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 ADAMTSL4-AS1Q5T5F5 129 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 SDIM1Q6ZPB5 146 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 IMUPQ9GZP8 106 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 NSD1Q96L73 2696 aaPredicted RBP3.81□□□□□ -1.8
PROM1-220ENST00000540805 Q9H8V8 135 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 DEFB131BA0A096LNP1 70 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 A0A0U1RQV1 116 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 MRPS36P82909 103 aaKnown RBP3.81□□□□□ -1.8
PROM1-220ENST00000540805 LINC00336Q6ZUF6 198 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 LRRC75A-AS1Q8N1F1 130 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 MAP6D1Q9H9H5 199 aa3.81□□□□□ -1.8
PROM1-220ENST00000540805 IGKV3D-7A0A0C4DH55 119 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 HIGD2BQ4VC39 106 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 C4orf3Q8WVX3 66 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 C16orf74Q96GX8 76 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 C2orf48Q96LS8 159 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 PYGO1Q9Y3Y4 419 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 HAMPP81172 84 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 DEFB114Q30KQ6 69 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 TINCRA0A1B0GVN0 87 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 LY6G6CO95867 125 aa3.8□□□□□ -1.8
PROM1-220ENST00000540805 C9orf129Q5T035 196 aaKnown RBP3.8□□□□□ -1.8
PROM1-220ENST00000540805 IGHV4-28A0A0C4DH34 117 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 K7EMT4 169 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 TIMM17BO60830 172 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 WFDC9Q8NEX5 89 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 PRO0255Q9UI72 69 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 CR1P17927 2039 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 LINC00643Q86TS7 51 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 COX7A2LO14548 114 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 UQCRQO14949 82 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 LINC00526Q96FQ7 95 aa3.79□□□□□ -1.8
PROM1-220ENST00000540805 K7EQD1 137 aa3.78□□□□□ -1.8
PROM1-220ENST00000540805 TIRAPP58753 221 aa3.78□□□□□ -1.8
PROM1-220ENST00000540805 STAB2Q8WWQ8 2551 aa3.78□□□□□ -1.8
PROM1-220ENST00000540805 ETDCA0A1B0GVM5 59 aa3.78□□□□□ -1.8
PROM1-220ENST00000540805 DCANP1Q8TF63 244 aa3.78□□□□□ -1.8
PROM1-220ENST00000540805 A0A1B0GX51 115 aa3.78□□□□□ -1.8
PROM1-220ENST00000540805 HILS1P60008 231 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 SPAG11BQ08648 103 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 FAM104AQ969W3 186 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 F8WDY8 70 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 NDUFA1O15239 70 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 Q8N2B8 174 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 HIGD2AQ9BW72 106 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 CMYA5Q8N3K9 4069 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 K7EQG2 157 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 COX7CP15954 63 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 CXCL5P42830 114 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 DAZ2Q13117 558 aaKnown RBP3.77□□□□□ -1.81
PROM1-220ENST00000540805 DAZ4Q86SG3 579 aaKnown RBP3.77□□□□□ -1.81
PROM1-220ENST00000540805 KRTAP1-3Q8IUG1 177 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 LINC00269Q8N2A0 174 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 LINC00308Q8TCZ7 52 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 DAZ3Q9NR90 486 aaKnown RBP3.77□□□□□ -1.81
PROM1-220ENST00000540805 UBE2D4Q9Y2X8 147 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 ANK2Q01484 3957 aa3.77□□□□□ -1.81
PROM1-220ENST00000540805 FLG2Q5D862 2391 aaPredicted RBP3.77□□□□□ -1.81
PROM1-220ENST00000540805 FHL2Q14192 279 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 RETNQ9HD89 108 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 TRACP01848 142 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 UBE2AP49459 152 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 PROK1P58294 105 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 RPS28P62857 69 aaKnown RBP3.76□□□□□ -1.81
PROM1-220ENST00000540805 CHCHD7Q9BUK0 85 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 FAM236DA0A1B0GTK5 79 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 NDUFS5O43920 106 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 BAALC-AS2P0C853 105 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 INAFM2P0DMQ5 153 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 FAM236CP0DP71 79 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 CDKN2A-AS1Q9UH64 79 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 ZNF702PQ9H963 129 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 XAGE1AQ9HD64 81 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 Q9UF83 564 aa3.76□□□□□ -1.81
PROM1-220ENST00000540805 ITPR2Q14571 2701 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 ATOX1O00244 68 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 SND1-IT1Q9HBX3 110 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 C22orf24Q9Y442 160 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 TMEM89A2RUT3 159 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 C4orf48Q5BLP8 95 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 FAM218AQ96MZ4 157 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 LINC00467Q9BRT7 94 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 IGLV5-45A0A087WSX0 123 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 A0A087WZ39 114 aa3.75□□□□□ -1.81
PROM1-220ENST00000540805 NANOS2P60321 138 aaKnown RBP3.75□□□□□ -1.81
PROM1-220ENST00000540805 FSHBP01225 129 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 IGLV1-40P01703 118 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 IGHV4-30-4P0DP06 118 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 BEAN1Q3B7T3 259 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 IL17DQ8TAD2 202 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 NCR3O14931 201 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms