RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 C2orf82Q6UX34 121 aa9.94□□□□□ -0.82
DDB1-218ENST00000540784 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
DDB1-218ENST00000540784 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
DDB1-218ENST00000540784 S100A6P06703 90 aa9.93□□□□□ -0.82
DDB1-218ENST00000540784 SYS1-DBNDD2H3BUS1 97 aa9.92□□□□□ -0.82
DDB1-218ENST00000540784 C6orf48Q9UBA6 75 aa9.92□□□□□ -0.82
DDB1-218ENST00000540784 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
DDB1-218ENST00000540784 TRBV30A0A0K0K1B3 111 aa9.91□□□□□ -0.82
DDB1-218ENST00000540784 DPM2O94777 84 aa9.91□□□□□ -0.82
DDB1-218ENST00000540784 PLNP26678 52 aa9.91□□□□□ -0.82
DDB1-218ENST00000540784 CXCL5P42830 114 aa9.91□□□□□ -0.82
DDB1-218ENST00000540784 HAMPP81172 84 aa9.91□□□□□ -0.82
DDB1-218ENST00000540784 PMCHL2Q9BQD1 86 aa9.91□□□□□ -0.82
DDB1-218ENST00000540784 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
DDB1-218ENST00000540784 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
DDB1-218ENST00000540784 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
DDB1-218ENST00000540784 CHTF8P0CG12 524 aa9.9□□□□□ -0.82
DDB1-218ENST00000540784 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
DDB1-218ENST00000540784 C21orf62-AS1Q17RA5 79 aa9.9□□□□□ -0.82
DDB1-218ENST00000540784 PET117Q6UWS5 81 aa9.9□□□□□ -0.82
DDB1-218ENST00000540784 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
DDB1-218ENST00000540784 PANO1I0J062 215 aa9.89□□□□□ -0.83
DDB1-218ENST00000540784 IGKCP01834 107 aa9.89□□□□□ -0.83
DDB1-218ENST00000540784 S100A2P29034 98 aa9.89□□□□□ -0.83
DDB1-218ENST00000540784 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
DDB1-218ENST00000540784 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
DDB1-218ENST00000540784 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
DDB1-218ENST00000540784 KIAA1109Q2LD37 5005 aa9.89□□□□□ -0.83
DDB1-218ENST00000540784 A0A096LNI7 61 aa9.88□□□□□ -0.83
DDB1-218ENST00000540784 C3orf79P0CE67 100 aa9.88□□□□□ -0.83
DDB1-218ENST00000540784 KRTDAPP60985 99 aa9.88□□□□□ -0.83
DDB1-218ENST00000540784 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
DDB1-218ENST00000540784 HIST3H2BBQ8N257 126 aa9.88□□□□□ -0.83
DDB1-218ENST00000540784 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
DDB1-218ENST00000540784 TLX1NBP0CAT3 122 aa9.87□□□□□ -0.83
DDB1-218ENST00000540784 PTTG1IPP53801 180 aa9.87□□□□□ -0.83
DDB1-218ENST00000540784 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
DDB1-218ENST00000540784 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
DDB1-218ENST00000540784 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
DDB1-218ENST00000540784 APOBP04114 4563 aaKnown RBP9.87□□□□□ -0.83
DDB1-218ENST00000540784 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
DDB1-218ENST00000540784 SNRPEP62304 92 aaKnown RBP9.86□□□□□ -0.83
DDB1-218ENST00000540784 A0A087WYN8 130 aa9.85□□□□□ -0.83
DDB1-218ENST00000540784 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
DDB1-218ENST00000540784 LINC01545Q5VT33 79 aa9.85□□□□□ -0.83
DDB1-218ENST00000540784 STPG4Q8N801 248 aa9.85□□□□□ -0.83
DDB1-218ENST00000540784 HERVK_113P61574 105 aa9.84□□□□□ -0.83
DDB1-218ENST00000540784 GAGE2EQ4V326 116 aa9.84□□□□□ -0.83
DDB1-218ENST00000540784 SFTA2Q6UW10 78 aa9.84□□□□□ -0.83
DDB1-218ENST00000540784 Q6ZRP5 223 aa9.84□□□□□ -0.83
DDB1-218ENST00000540784 HIST1H2BLQ99880 126 aa9.84□□□□□ -0.83
DDB1-218ENST00000540784 GAGE2DQ9UEU5 116 aa9.84□□□□□ -0.83
DDB1-218ENST00000540784 RYR1P21817 5038 aa9.84□□□□□ -0.83
DDB1-218ENST00000540784 C20orf202A1L168 122 aa9.83□□□□□ -0.84
DDB1-218ENST00000540784 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
DDB1-218ENST00000540784 C5orf52A6NGY3 159 aa9.82□□□□□ -0.84
DDB1-218ENST00000540784 LEPROTO15243 131 aa9.82□□□□□ -0.84
DDB1-218ENST00000540784 PLEKHB2Q96CS7 222 aa9.82□□□□□ -0.84
DDB1-218ENST00000540784 HSPG2P98160 4391 aa9.82□□□□□ -0.84
DDB1-218ENST00000540784 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
DDB1-218ENST00000540784 Q8N1X5 172 aa9.81□□□□□ -0.84
DDB1-218ENST00000540784 ZNF625Q96I27 306 aaPredicted RBP9.8□□□□□ -0.84
DDB1-218ENST00000540784 A0A1W2PNN7 141 aa9.79□□□□□ -0.84
DDB1-218ENST00000540784 PFN2P35080 140 aa9.79□□□□□ -0.84
DDB1-218ENST00000540784 AKR1D1P51857 326 aa9.79□□□□□ -0.84
DDB1-218ENST00000540784 ERG28Q9UKR5 140 aa9.79□□□□□ -0.84
DDB1-218ENST00000540784 MYMXA0A1B0GTQ4 84 aa9.78□□□□□ -0.84
DDB1-218ENST00000540784 J3QQQ9 107 aa9.78□□□□□ -0.84
DDB1-218ENST00000540784 COX17Q14061 63 aa9.78□□□□□ -0.84
DDB1-218ENST00000540784 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
DDB1-218ENST00000540784 KRTAP17-1Q9BYP8 105 aa9.78□□□□□ -0.84
DDB1-218ENST00000540784 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
DDB1-218ENST00000540784 EPM2AB3EWF7 344 aa9.77□□□□□ -0.85
DDB1-218ENST00000540784 E9PLD3 99 aa9.77□□□□□ -0.85
DDB1-218ENST00000540784 LGALS3P17931 250 aaKnown RBP9.77□□□□□ -0.85
DDB1-218ENST00000540784 HERV-K104P63124 156 aa9.77□□□□□ -0.85
DDB1-218ENST00000540784 HERC2O95714 4834 aa9.76□□□□□ -0.85
DDB1-218ENST00000540784 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
DDB1-218ENST00000540784 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
DDB1-218ENST00000540784 LINC00587B1AMM8 73 aa9.75□□□□□ -0.85
DDB1-218ENST00000540784 LINC00158P58513 81 aa9.75□□□□□ -0.85
DDB1-218ENST00000540784 TSPEAR-AS2P59090 65 aa9.75□□□□□ -0.85
DDB1-218ENST00000540784 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
DDB1-218ENST00000540784 NMUP48645 174 aa9.74□□□□□ -0.85
DDB1-218ENST00000540784 Q5VSD8 79 aa9.74□□□□□ -0.85
DDB1-218ENST00000540784 ATOH7Q8N100 152 aa9.74□□□□□ -0.85
DDB1-218ENST00000540784 C7orf33Q8WU49 177 aa9.74□□□□□ -0.85
DDB1-218ENST00000540784 PLA2G1BP04054 148 aaKnown RBP9.73□□□□□ -0.85
DDB1-218ENST00000540784 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
DDB1-218ENST00000540784 FAM19A5Q7Z5A7 132 aaPredicted RBP9.73□□□□□ -0.85
DDB1-218ENST00000540784 A0A0U1RRA0 63 aa9.72□□□□□ -0.85
DDB1-218ENST00000540784 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
DDB1-218ENST00000540784 SCGB1D1O95968 90 aa9.71□□□□□ -0.86
DDB1-218ENST00000540784 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.86
DDB1-218ENST00000540784 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
DDB1-218ENST00000540784 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
DDB1-218ENST00000540784 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
DDB1-218ENST00000540784 KRTAP4-5Q9BYR2 181 aa9.7□□□□□ -0.86
DDB1-218ENST00000540784 IGKV2D-26A0A0A0MRZ7 120 aa9.69□□□□□ -0.86
DDB1-218ENST00000540784 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms