RNA–Protein interactions for RNA: ENST00000539091.5

RAP1B-220, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-220ENST00000539091 Q6ZSA8 131 aa13.36□□□□□ -0.27
RAP1B-220ENST00000539091 HAMPP81172 84 aa13.35□□□□□ -0.27
RAP1B-220ENST00000539091 XGP55808 180 aa13.34□□□□□ -0.27
RAP1B-220ENST00000539091 ODF1Q14990 250 aa13.34□□□□□ -0.27
RAP1B-220ENST00000539091 DPM2O94777 84 aa13.33□□□□□ -0.28
RAP1B-220ENST00000539091 S100A2P29034 98 aa13.33□□□□□ -0.28
RAP1B-220ENST00000539091 C10orf25Q5T742 122 aa13.33□□□□□ -0.28
RAP1B-220ENST00000539091 SCXQ7RTU7 201 aa13.33□□□□□ -0.28
RAP1B-220ENST00000539091 C6orf48Q9UBA6 75 aa13.32□□□□□ -0.28
RAP1B-220ENST00000539091 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.32□□□□□ -0.28
RAP1B-220ENST00000539091 A0A096LNI7 61 aa13.31□□□□□ -0.28
RAP1B-220ENST00000539091 CHTF8P0CG12 524 aa13.31□□□□□ -0.28
RAP1B-220ENST00000539091 HERVK_113P61574 105 aa13.31□□□□□ -0.28
RAP1B-220ENST00000539091 CIRBP-AS1Q8TBR5 109 aa13.31□□□□□ -0.28
RAP1B-220ENST00000539091 FAM229AH3BQW9 127 aa13.3□□□□□ -0.28
RAP1B-220ENST00000539091 IGKCP01834 107 aa13.3□□□□□ -0.28
RAP1B-220ENST00000539091 PTTG1IPP53801 180 aa13.3□□□□□ -0.28
RAP1B-220ENST00000539091 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
RAP1B-220ENST00000539091 SYS1-DBNDD2H3BUS1 97 aa13.29□□□□□ -0.28
RAP1B-220ENST00000539091 SMR3BP02814 79 aaPredicted RBP13.29□□□□□ -0.28
RAP1B-220ENST00000539091 KRTDAPP60985 99 aa13.29□□□□□ -0.28
RAP1B-220ENST00000539091 STPG4Q8N801 248 aa13.29□□□□□ -0.28
RAP1B-220ENST00000539091 SPACA4Q8TDM5 124 aa13.29□□□□□ -0.28
RAP1B-220ENST00000539091 IGLV5-39A0A0G2JS06 123 aa13.28□□□□□ -0.28
RAP1B-220ENST00000539091 TMEM223A0PJW6 202 aa13.28□□□□□ -0.28
RAP1B-220ENST00000539091 C20orf202A1L168 122 aa13.28□□□□□ -0.28
RAP1B-220ENST00000539091 GAGE2EQ4V326 116 aa13.28□□□□□ -0.28
RAP1B-220ENST00000539091 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
RAP1B-220ENST00000539091 PMCHL2Q9BQD1 86 aa13.28□□□□□ -0.28
RAP1B-220ENST00000539091 GAGE2DQ9UEU5 116 aa13.28□□□□□ -0.28
RAP1B-220ENST00000539091 DYNC1H1Q14204 4646 aaKnown RBP13.27□□□□□ -0.28
RAP1B-220ENST00000539091 A0A087WYN8 130 aa13.26□□□□□ -0.29
RAP1B-220ENST00000539091 NDUFC2-KCTD14E9PQ53 114 aa13.26□□□□□ -0.29
RAP1B-220ENST00000539091 TLX1NBP0CAT3 122 aa13.26□□□□□ -0.29
RAP1B-220ENST00000539091 CIRBPQ14011 172 aaKnown RBP13.26□□□□□ -0.29
RAP1B-220ENST00000539091 C9orf116Q5BN46 136 aaPredicted RBP13.26□□□□□ -0.29
RAP1B-220ENST00000539091 Q8N1X5 172 aa13.26□□□□□ -0.29
RAP1B-220ENST00000539091 DNAH5Q8TE73 4624 aa13.24□□□□□ -0.29
RAP1B-220ENST00000539091 EPM2AB3EWF7 344 aa13.24□□□□□ -0.29
RAP1B-220ENST00000539091 PANO1I0J062 215 aa13.24□□□□□ -0.29
RAP1B-220ENST00000539091 C7orf33Q8WU49 177 aa13.24□□□□□ -0.29
RAP1B-220ENST00000539091 C3orf79P0CE67 100 aa13.23□□□□□ -0.29
RAP1B-220ENST00000539091 LINC00528Q8N1L1 170 aa13.23□□□□□ -0.29
RAP1B-220ENST00000539091 PLEKHB2Q96CS7 222 aa13.23□□□□□ -0.29
RAP1B-220ENST00000539091 PLA2G1BP04054 148 aaKnown RBP13.22□□□□□ -0.29
RAP1B-220ENST00000539091 AKR1D1P51857 326 aa13.22□□□□□ -0.29
RAP1B-220ENST00000539091 Q6ZRP5 223 aa13.22□□□□□ -0.29
RAP1B-220ENST00000539091 PLAC8Q9NZF1 115 aa13.22□□□□□ -0.29
RAP1B-220ENST00000539091 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
RAP1B-220ENST00000539091 LINC01545Q5VT33 79 aa13.2□□□□□ -0.3
RAP1B-220ENST00000539091 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
RAP1B-220ENST00000539091 LEPROTO15243 131 aa13.19□□□□□ -0.3
RAP1B-220ENST00000539091 LGALS3P17931 250 aaKnown RBP13.19□□□□□ -0.3
RAP1B-220ENST00000539091 PFN2P35080 140 aa13.19□□□□□ -0.3
RAP1B-220ENST00000539091 Q5VSD8 79 aa13.19□□□□□ -0.3
RAP1B-220ENST00000539091 HIST3H2BBQ8N257 126 aa13.19□□□□□ -0.3
RAP1B-220ENST00000539091 ZNF625Q96I27 306 aaPredicted RBP13.19□□□□□ -0.3
RAP1B-220ENST00000539091 SNRPEP62304 92 aaKnown RBP13.18□□□□□ -0.3
RAP1B-220ENST00000539091 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
RAP1B-220ENST00000539091 HERV-K104P63124 156 aa13.17□□□□□ -0.3
RAP1B-220ENST00000539091 NDUFA12Q9UI09 145 aa13.17□□□□□ -0.3
RAP1B-220ENST00000539091 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
RAP1B-220ENST00000539091 COX17Q14061 63 aa13.16□□□□□ -0.3
RAP1B-220ENST00000539091 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
RAP1B-220ENST00000539091 J3QQQ9 107 aa13.15□□□□□ -0.3
RAP1B-220ENST00000539091 LINC00158P58513 81 aa13.15□□□□□ -0.3
RAP1B-220ENST00000539091 HIST1H2BLQ99880 126 aa13.15□□□□□ -0.3
RAP1B-220ENST00000539091 KIAA1109Q2LD37 5005 aa13.15□□□□□ -0.31
RAP1B-220ENST00000539091 NMUP48645 174 aa13.14□□□□□ -0.31
RAP1B-220ENST00000539091 RPL37AP61513 92 aaKnown RBP13.14□□□□□ -0.31
RAP1B-220ENST00000539091 FAM19A5Q7Z5A7 132 aaPredicted RBP13.14□□□□□ -0.31
RAP1B-220ENST00000539091 XAGE1AQ9HD64 81 aa13.14□□□□□ -0.31
RAP1B-220ENST00000539091 A0A1W2PNN7 141 aa13.11□□□□□ -0.31
RAP1B-220ENST00000539091 E9PLD3 99 aa13.1□□□□□ -0.31
RAP1B-220ENST00000539091 A0A0U1RRA0 63 aa13.09□□□□□ -0.31
RAP1B-220ENST00000539091 C9orf129Q5T035 196 aaKnown RBP13.09□□□□□ -0.31
RAP1B-220ENST00000539091 FAM168BA1KXE4 195 aa13.08□□□□□ -0.32
RAP1B-220ENST00000539091 C5orf52A6NGY3 159 aa13.08□□□□□ -0.32
RAP1B-220ENST00000539091 HSBP1L1C9JCN9 74 aa13.08□□□□□ -0.32
RAP1B-220ENST00000539091 M0QXV9 152 aa13.08□□□□□ -0.32
RAP1B-220ENST00000539091 RYR1P21817 5038 aa13.08□□□□□ -0.32
RAP1B-220ENST00000539091 UBE2BP63146 152 aa13.07□□□□□ -0.32
RAP1B-220ENST00000539091 NKAPP1Q8N9T2 125 aa13.07□□□□□ -0.32
RAP1B-220ENST00000539091 SMIM13P0DJ93 91 aa13.06□□□□□ -0.32
RAP1B-220ENST00000539091 TSPEAR-AS2P59090 65 aa13.06□□□□□ -0.32
RAP1B-220ENST00000539091 LBHQ53QV2 105 aaPredicted RBP13.06□□□□□ -0.32
RAP1B-220ENST00000539091 ATOH7Q8N100 152 aa13.06□□□□□ -0.32
RAP1B-220ENST00000539091 APOBP04114 4563 aaKnown RBP13.06□□□□□ -0.32
RAP1B-220ENST00000539091 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
RAP1B-220ENST00000539091 RPL24P83731 157 aaKnown RBP13.05□□□□□ -0.32
RAP1B-220ENST00000539091 PHF5AQ7RTV0 110 aaKnown RBP13.05□□□□□ -0.32
RAP1B-220ENST00000539091 SND1-IT1Q9HBX3 110 aa13.05□□□□□ -0.32
RAP1B-220ENST00000539091 INAFM2P0DMQ5 153 aa13.03□□□□□ -0.32
RAP1B-220ENST00000539091 TMA7Q9Y2S6 64 aaKnown RBP13.03□□□□□ -0.32
RAP1B-220ENST00000539091 ZNF815PA8K554 130 aa13.01□□□□□ -0.33
RAP1B-220ENST00000539091 MIEN1Q9BRT3 115 aa13.01□□□□□ -0.33
RAP1B-220ENST00000539091 PLA2G2DQ9UNK4 145 aa13.01□□□□□ -0.33
RAP1B-220ENST00000539091 C22orf24Q9Y442 160 aa13.01□□□□□ -0.33
RAP1B-220ENST00000539091 SERTAD4-AS1Q5TG53 156 aa13□□□□□ -0.33
RAP1B-220ENST00000539091 MIR7-3HGQ8N6C7 128 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms