RNA–Protein interactions for RNA: ENST00000538980.5

RAP1B-219, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-219ENST00000538980 Q8IZM0 81 aa12.68□□□□□ -0.38
RAP1B-219ENST00000538980 CKS1BP61024 79 aa12.67□□□□□ -0.38
RAP1B-219ENST00000538980 C6orf226Q5I0X4 101 aa12.67□□□□□ -0.38
RAP1B-219ENST00000538980 SMIM1B2RUZ4 78 aa12.66□□□□□ -0.38
RAP1B-219ENST00000538980 TRBV30A0A0K0K1B3 111 aa12.65□□□□□ -0.38
RAP1B-219ENST00000538980 IGLC3P0DOY3 106 aa12.65□□□□□ -0.38
RAP1B-219ENST00000538980 H3BRM9 83 aa12.64□□□□□ -0.39
RAP1B-219ENST00000538980 SPINK8P0C7L1 97 aa12.64□□□□□ -0.39
RAP1B-219ENST00000538980 KRTAP10-4P60372 401 aaPredicted RBP12.64□□□□□ -0.39
RAP1B-219ENST00000538980 C7orf33Q8WU49 177 aa12.64□□□□□ -0.39
RAP1B-219ENST00000538980 SERF1AO75920 110 aa12.63□□□□□ -0.39
RAP1B-219ENST00000538980 TLX1NBP0CAT3 122 aa12.63□□□□□ -0.39
RAP1B-219ENST00000538980 FAM19A2Q8N3H0 131 aa12.63□□□□□ -0.39
RAP1B-219ENST00000538980 SRRM2Q9UQ35 2752 aaKnown RBP12.63□□□□□ -0.39
RAP1B-219ENST00000538980 HERC1Q15751 4861 aa12.62□□□□□ -0.39
RAP1B-219ENST00000538980 Q6ZRP5 223 aa12.62□□□□□ -0.39
RAP1B-219ENST00000538980 COX7B2Q8TF08 81 aa12.62□□□□□ -0.39
RAP1B-219ENST00000538980 IFI27L1Q96BM0 104 aa12.62□□□□□ -0.39
RAP1B-219ENST00000538980 CXCL5P42830 114 aa12.61□□□□□ -0.39
RAP1B-219ENST00000538980 GAGE2EQ4V326 116 aa12.61□□□□□ -0.39
RAP1B-219ENST00000538980 GAGE2DQ9UEU5 116 aa12.61□□□□□ -0.39
RAP1B-219ENST00000538980 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
RAP1B-219ENST00000538980 LINC00310P59036 64 aa12.6□□□□□ -0.39
RAP1B-219ENST00000538980 C9orf116Q5BN46 136 aaPredicted RBP12.6□□□□□ -0.39
RAP1B-219ENST00000538980 CHTOPQ9Y3Y2 248 aaKnown RBP12.6□□□□□ -0.39
RAP1B-219ENST00000538980 FLG2Q5D862 2391 aaPredicted RBP12.59□□□□□ -0.39
RAP1B-219ENST00000538980 A0A1W2PNN7 141 aa12.59□□□□□ -0.39
RAP1B-219ENST00000538980 C11orf86A6NJI1 115 aa12.59□□□□□ -0.39
RAP1B-219ENST00000538980 F8VRH5 84 aa12.59□□□□□ -0.39
RAP1B-219ENST00000538980 NDUFC2-KCTD14E9PQ53 114 aa12.58□□□□□ -0.4
RAP1B-219ENST00000538980 TRAV12-1A0A0B4J245 112 aa12.57□□□□□ -0.4
RAP1B-219ENST00000538980 LEPROTL1O95214 131 aa12.56□□□□□ -0.4
RAP1B-219ENST00000538980 TMEM170BQ5T4T1 132 aa12.56□□□□□ -0.4
RAP1B-219ENST00000538980 NUPR1O60356 82 aa12.55□□□□□ -0.4
RAP1B-219ENST00000538980 H0Y8G0 127 aa12.54□□□□□ -0.4
RAP1B-219ENST00000538980 IGLV5-39A0A0G2JS06 123 aa12.53□□□□□ -0.4
RAP1B-219ENST00000538980 FAM168BA1KXE4 195 aa12.53□□□□□ -0.4
RAP1B-219ENST00000538980 FAM19A5Q7Z5A7 132 aaPredicted RBP12.53□□□□□ -0.4
RAP1B-219ENST00000538980 HIST1H2BKO60814 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BJP06899 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BOP23527 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BBP33778 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HNRNPA3P51991 378 aaKnown RBP12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BDP58876 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BCP62807 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST2H2BEQ16778 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BHQ93079 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BNQ99877 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 HIST1H2BMQ99879 126 aa12.52□□□□□ -0.41
RAP1B-219ENST00000538980 FABP4P15090 132 aa12.51□□□□□ -0.41
RAP1B-219ENST00000538980 PRR3P79522 188 aaKnown RBP12.51□□□□□ -0.41
RAP1B-219ENST00000538980 C9orf129Q5T035 196 aaKnown RBP12.51□□□□□ -0.41
RAP1B-219ENST00000538980 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
RAP1B-219ENST00000538980 HSPB8Q9UJY1 196 aa12.51□□□□□ -0.41
RAP1B-219ENST00000538980 XAGE1AQ9HD64 81 aa12.49□□□□□ -0.41
RAP1B-219ENST00000538980 ODF1Q14990 250 aa12.48□□□□□ -0.41
RAP1B-219ENST00000538980 TMEM223A0PJW6 202 aa12.47□□□□□ -0.41
RAP1B-219ENST00000538980 MYCBP2O75592 4640 aa12.47□□□□□ -0.41
RAP1B-219ENST00000538980 PKHD1L1Q86WI1 4243 aa12.46□□□□□ -0.41
RAP1B-219ENST00000538980 M0QXV9 152 aa12.46□□□□□ -0.41
RAP1B-219ENST00000538980 S100A1P23297 94 aa12.46□□□□□ -0.41
RAP1B-219ENST00000538980 KRTAP7-1Q8IUC3 87 aa12.46□□□□□ -0.41
RAP1B-219ENST00000538980 DMBT1Q9UGM3 2413 aaPredicted RBP12.46□□□□□ -0.42
RAP1B-219ENST00000538980 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
RAP1B-219ENST00000538980 PFN2P35080 140 aa12.43□□□□□ -0.42
RAP1B-219ENST00000538980 SERTAD4-AS1Q5TG53 156 aa12.43□□□□□ -0.42
RAP1B-219ENST00000538980 SFTA2Q6UW10 78 aa12.43□□□□□ -0.42
RAP1B-219ENST00000538980 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
RAP1B-219ENST00000538980 MAP1LC3CQ9BXW4 147 aa12.43□□□□□ -0.42
RAP1B-219ENST00000538980 J3QL48 77 aa12.42□□□□□ -0.42
RAP1B-219ENST00000538980 PSORS1C2Q9UIG4 136 aa12.42□□□□□ -0.42
RAP1B-219ENST00000538980 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
RAP1B-219ENST00000538980 KRTAP29-1A8MX34 341 aaPredicted RBP12.41□□□□□ -0.42
RAP1B-219ENST00000538980 PLNP26678 52 aa12.41□□□□□ -0.42
RAP1B-219ENST00000538980 UBE2BP63146 152 aa12.41□□□□□ -0.42
RAP1B-219ENST00000538980 PMCHL2Q9BQD1 86 aa12.41□□□□□ -0.42
RAP1B-219ENST00000538980 DPM2O94777 84 aa12.4□□□□□ -0.42
RAP1B-219ENST00000538980 C1orf137Q5JT78 98 aa12.39□□□□□ -0.43
RAP1B-219ENST00000538980 OXTP01178 125 aa12.38□□□□□ -0.43
RAP1B-219ENST00000538980 KRTAP11-1Q8IUC1 163 aa12.38□□□□□ -0.43
RAP1B-219ENST00000538980 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
RAP1B-219ENST00000538980 IGKCP01834 107 aa12.37□□□□□ -0.43
RAP1B-219ENST00000538980 COX17Q14061 63 aa12.37□□□□□ -0.43
RAP1B-219ENST00000538980 COA6Q5JTJ3 125 aaKnown RBP12.36□□□□□ -0.43
RAP1B-219ENST00000538980 SYS1-DBNDD2H3BUS1 97 aa12.35□□□□□ -0.43
RAP1B-219ENST00000538980 HERVK_113P61574 105 aa12.35□□□□□ -0.43
RAP1B-219ENST00000538980 LBHQ53QV2 105 aaPredicted RBP12.35□□□□□ -0.43
RAP1B-219ENST00000538980 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
RAP1B-219ENST00000538980 PLA2G2DQ9UNK4 145 aa12.35□□□□□ -0.43
RAP1B-219ENST00000538980 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
RAP1B-219ENST00000538980 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
RAP1B-219ENST00000538980 LRP1Q07954 4544 aaKnown RBP12.34□□□□□ -0.43
RAP1B-219ENST00000538980 FAT3Q8TDW7 4589 aa12.33□□□□□ -0.44
RAP1B-219ENST00000538980 LEPROTO15243 131 aa12.33□□□□□ -0.44
RAP1B-219ENST00000538980 LINC00158P58513 81 aa12.33□□□□□ -0.44
RAP1B-219ENST00000538980 MRPL55Q7Z7F7 128 aaKnown RBP12.33□□□□□ -0.44
RAP1B-219ENST00000538980 PLEKHB2Q96CS7 222 aa12.33□□□□□ -0.44
RAP1B-219ENST00000538980 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
RAP1B-219ENST00000538980 A0A0U1RRA0 63 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms