RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 COX11Q9Y6N1 276 aa12.9□□□□□ -0.34
EFCAB11-202ENST00000538485 M0R2N4 97 aa12.89□□□□□ -0.35
EFCAB11-202ENST00000538485 SRSF9Q13242 221 aaKnown RBP eCLIP12.89□□□□□ -0.35
EFCAB11-202ENST00000538485 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
EFCAB11-202ENST00000538485 DNAH2Q9P225 4427 aa12.88□□□□□ -0.35
EFCAB11-202ENST00000538485 TMEM238C9JI98 176 aa12.88□□□□□ -0.35
EFCAB11-202ENST00000538485 LY6G6CO95867 125 aa12.88□□□□□ -0.35
EFCAB11-202ENST00000538485 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
EFCAB11-202ENST00000538485 A0A0U1RRA0 63 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 EREGO14944 169 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 CXCL5P42830 114 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 BATFQ16520 125 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 MEIG1Q5JSS6 88 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 BVES-AS1Q5T3Y7 98 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 NTN5Q8WTR8 489 aaPredicted RBP12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 LINC00476Q8WZB0 136 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 TM2D2Q9BX73 214 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 M0R143 59 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 TAL2Q16559 108 aa12.87□□□□□ -0.35
EFCAB11-202ENST00000538485 TIMM17BO60830 172 aa12.86□□□□□ -0.35
EFCAB11-202ENST00000538485 GCSHP23434 173 aa12.86□□□□□ -0.35
EFCAB11-202ENST00000538485 C10orf25Q5T742 122 aa12.86□□□□□ -0.35
EFCAB11-202ENST00000538485 CEND1Q8N111 149 aa12.86□□□□□ -0.35
EFCAB11-202ENST00000538485 DAND5Q8N907 189 aa12.86□□□□□ -0.35
EFCAB11-202ENST00000538485 GVQW2A0A096LPI5 108 aaPredicted RBP12.85□□□□□ -0.35
EFCAB11-202ENST00000538485 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
EFCAB11-202ENST00000538485 CIRBPQ14011 172 aaKnown RBP12.85□□□□□ -0.35
EFCAB11-202ENST00000538485 UNQ6190/PRO20217Q6UXQ8 127 aa12.85□□□□□ -0.35
EFCAB11-202ENST00000538485 USP17L23D6RBM5 183 aa12.85□□□□□ -0.35
EFCAB11-202ENST00000538485 ALMS1Q8TCU4 4167 aa12.84□□□□□ -0.35
EFCAB11-202ENST00000538485 LECT2O14960 151 aa12.84□□□□□ -0.35
EFCAB11-202ENST00000538485 PSCAO43653 123 aa12.83□□□□□ -0.36
EFCAB11-202ENST00000538485 FXYD2P54710 66 aa12.83□□□□□ -0.36
EFCAB11-202ENST00000538485 Q6ZR54 194 aa12.83□□□□□ -0.36
EFCAB11-202ENST00000538485 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
EFCAB11-202ENST00000538485 PFN2P35080 140 aa12.82□□□□□ -0.36
EFCAB11-202ENST00000538485 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
EFCAB11-202ENST00000538485 SPANXDQ9BXN6 97 aa12.82□□□□□ -0.36
EFCAB11-202ENST00000538485 SPANXCQ9NY87 97 aa12.82□□□□□ -0.36
EFCAB11-202ENST00000538485 Q6ZRN7 208 aaPredicted RBP12.82□□□□□ -0.36
EFCAB11-202ENST00000538485 WFDC2Q14508 124 aa12.81□□□□□ -0.36
EFCAB11-202ENST00000538485 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
EFCAB11-202ENST00000538485 EIF4EBP3O60516 100 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-202ENST00000538485 LINC00158P58513 81 aa12.8□□□□□ -0.36
EFCAB11-202ENST00000538485 NPC2P61916 151 aa12.8□□□□□ -0.36
EFCAB11-202ENST00000538485 MUSTN1Q8IVN3 82 aa12.8□□□□□ -0.36
EFCAB11-202ENST00000538485 C2orf48Q96LS8 159 aa12.8□□□□□ -0.36
EFCAB11-202ENST00000538485 DNAH6Q9C0G6 4158 aa12.8□□□□□ -0.36
EFCAB11-202ENST00000538485 Q6ZVH6 145 aa12.8□□□□□ -0.36
EFCAB11-202ENST00000538485 HYDINQ4G0P3 5121 aa12.79□□□□□ -0.36
EFCAB11-202ENST00000538485 Q6ZRU5 148 aa12.79□□□□□ -0.36
EFCAB11-202ENST00000538485 C6orf48Q9UBA6 75 aa12.79□□□□□ -0.36
EFCAB11-202ENST00000538485 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
EFCAB11-202ENST00000538485 MIR7-3HGQ8N6C7 128 aa12.78□□□□□ -0.36
EFCAB11-202ENST00000538485 SLPIP03973 132 aa12.77□□□□□ -0.37
EFCAB11-202ENST00000538485 COX17Q14061 63 aa12.76□□□□□ -0.37
EFCAB11-202ENST00000538485 SOSTDC1Q6X4U4 206 aa12.76□□□□□ -0.37
EFCAB11-202ENST00000538485 LINC00308Q8TCZ7 52 aa12.76□□□□□ -0.37
EFCAB11-202ENST00000538485 TRBV30A0A0K0K1B3 111 aa12.75□□□□□ -0.37
EFCAB11-202ENST00000538485 SYCNQ0VAF6 134 aa12.75□□□□□ -0.37
EFCAB11-202ENST00000538485 SACSQ9NZJ4 4579 aa12.75□□□□□ -0.37
EFCAB11-202ENST00000538485 F8WDY8 70 aa12.74□□□□□ -0.37
EFCAB11-202ENST00000538485 IFITM1P13164 125 aa12.74□□□□□ -0.37
EFCAB11-202ENST00000538485 A4D1N5 150 aa12.74□□□□□ -0.37
EFCAB11-202ENST00000538485 LRCOL1A6NCL2 159 aa12.74□□□□□ -0.37
EFCAB11-202ENST00000538485 RPL24P83731 157 aaKnown RBP12.74□□□□□ -0.37
EFCAB11-202ENST00000538485 NHP2Q9NX24 153 aaKnown RBP12.74□□□□□ -0.37
EFCAB11-202ENST00000538485 TMEM238LA0A1B0GVL6 79 aa12.72□□□□□ -0.37
EFCAB11-202ENST00000538485 A6NDN8 102 aa12.72□□□□□ -0.37
EFCAB11-202ENST00000538485 A6NJY4 79 aa12.72□□□□□ -0.37
EFCAB11-202ENST00000538485 COL5A1-AS1Q5SY13 56 aa12.72□□□□□ -0.37
EFCAB11-202ENST00000538485 CARD19Q96LW7 228 aa12.71□□□□□ -0.37
EFCAB11-202ENST00000538485 K7ERJ3 54 aa12.7□□□□□ -0.38
EFCAB11-202ENST00000538485 LBHQ53QV2 105 aaPredicted RBP12.7□□□□□ -0.38
EFCAB11-202ENST00000538485 C1orf134Q5TEV5 83 aa12.7□□□□□ -0.38
EFCAB11-202ENST00000538485 DNAH17Q9UFH2 4485 aa12.69□□□□□ -0.38
EFCAB11-202ENST00000538485 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
EFCAB11-202ENST00000538485 CFC1P0CG37 223 aa12.69□□□□□ -0.38
EFCAB11-202ENST00000538485 COPS9Q8WXC6 57 aa12.69□□□□□ -0.38
EFCAB11-202ENST00000538485 A0A1B0GWB2 263 aa12.68□□□□□ -0.38
EFCAB11-202ENST00000538485 SND1-IT1Q9HBX3 110 aa12.68□□□□□ -0.38
EFCAB11-202ENST00000538485 C14orf177Q52M58 125 aa12.68□□□□□ -0.38
EFCAB11-202ENST00000538485 PPDPFQ9H3Y8 114 aa12.68□□□□□ -0.38
EFCAB11-202ENST00000538485 FRAS1Q86XX4 4008 aa12.67□□□□□ -0.38
EFCAB11-202ENST00000538485 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
EFCAB11-202ENST00000538485 NDUFC2-KCTD14E9PQ53 114 aa12.66□□□□□ -0.38
EFCAB11-202ENST00000538485 LOC107984156A0A0G2JMH3 177 aa12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 CNBPP62633 177 aaKnown RBP12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 RNF151Q2KHN1 245 aa12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 ARL17AQ8IVW1 177 aa12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 RAB37Q96AX2 223 aa12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 TAX1BP3O14907 124 aa12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 Q6ZRP5 223 aa12.65□□□□□ -0.38
EFCAB11-202ENST00000538485 A0A087WTM6 91 aa12.64□□□□□ -0.39
EFCAB11-202ENST00000538485 XAGE1AQ9HD64 81 aa12.64□□□□□ -0.39
EFCAB11-202ENST00000538485 Q8N814 137 aa12.63□□□□□ -0.39
EFCAB11-202ENST00000538485 A0A0B4J2C4 111 aa12.62□□□□□ -0.39
EFCAB11-202ENST00000538485 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms