RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 SCGB3A1Q96QR1 104 aa5.59□□□□□ -1.51
USP28-205ENST00000537706 KIR2DL4Q99706 377 aa5.59□□□□□ -1.51
USP28-205ENST00000537706 RHODO00212 210 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 DLEU1O43261 78 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 RPL36AP83881 106 aaKnown RBP5.58□□□□□ -1.52
USP28-205ENST00000537706 MPV17L2Q567V2 206 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 RPL36ALQ969Q0 106 aaKnown RBP5.58□□□□□ -1.52
USP28-205ENST00000537706 CHCHD5Q9BSY4 110 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 CYSLTR1Q9Y271 337 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 F8VRH5 84 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 UFSP1Q6NVU6 142 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 C2orf91Q6ZV80 131 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 ERASQ7Z444 233 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 BOD1L2Q8IYS8 172 aa5.58□□□□□ -1.52
USP28-205ENST00000537706 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
USP28-205ENST00000537706 CLPSL2Q6UWE3 100 aa5.57□□□□□ -1.52
USP28-205ENST00000537706 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
USP28-205ENST00000537706 TIMM17AQ99595 171 aa5.57□□□□□ -1.52
USP28-205ENST00000537706 TRBV6-8A0A0A6YYG3 113 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 TRAV8-4A0A0B4J246 113 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
USP28-205ENST00000537706 HINT1P49773 126 aaPredicted RBP5.56□□□□□ -1.52
USP28-205ENST00000537706 TMEM141Q96I45 108 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 PRR34Q9NV39 138 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 IGIPA6NJ69 53 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 TSHBP01222 138 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 SLPIP03973 132 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 NMUP48645 174 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 ZC2HC1BQ5TFG8 222 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 KRTAP26-1Q6PEX3 210 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
USP28-205ENST00000537706 CHTOPQ9Y3Y2 248 aaKnown RBP5.56□□□□□ -1.52
USP28-205ENST00000537706 I3L3M4 83 aa5.55□□□□□ -1.52
USP28-205ENST00000537706 CRYGAP11844 174 aa5.55□□□□□ -1.52
USP28-205ENST00000537706 TMEM97Q5BJF2 176 aa5.55□□□□□ -1.52
USP28-205ENST00000537706 BVES-AS1Q5T3Y7 98 aa5.55□□□□□ -1.52
USP28-205ENST00000537706 A0A096LNI7 61 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 C1orf137Q5JT78 98 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 PCP2Q8IVA1 136 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 IGKV2D-26A0A0A0MRZ7 120 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 TSPAN13O95857 204 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 HSD52Q0P140 79 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 LINC00469Q8N7U9 141 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 HIGD1BQ9P298 99 aa5.54□□□□□ -1.52
USP28-205ENST00000537706 TRBV7-3A0A075B6L6 115 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 UBE2D3P61077 147 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 UBE2D2P62837 147 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 RPL39P62891 51 aaKnown RBP5.53□□□□□ -1.52
USP28-205ENST00000537706 SEC11AP67812 179 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 REG3AQ06141 175 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 PMVKQ15126 192 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 Q9UF83 564 aa5.53□□□□□ -1.52
USP28-205ENST00000537706 IGLV4-69A0A075B6H9 119 aa5.52□□□□□ -1.53
USP28-205ENST00000537706 RBX1P62877 108 aa5.52□□□□□ -1.53
USP28-205ENST00000537706 H0Y9J4 135 aa5.52□□□□□ -1.53
USP28-205ENST00000537706 NPSP0C0P6 89 aa5.52□□□□□ -1.53
USP28-205ENST00000537706 ORAOV1Q8WV07 137 aa5.52□□□□□ -1.53
USP28-205ENST00000537706 CST9LQ9H4G1 147 aa5.52□□□□□ -1.53
USP28-205ENST00000537706 E9PLD3 99 aa5.51□□□□□ -1.53
USP28-205ENST00000537706 ZNF25P17030 456 aaPredicted RBP5.51□□□□□ -1.53
USP28-205ENST00000537706 PYGO1Q9Y3Y4 419 aa5.51□□□□□ -1.53
USP28-205ENST00000537706 TRBV25-1A0A075B6N4 114 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 C11orf86A6NJI1 115 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 CFC1BP0CG36 223 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 GAGE6Q13070 117 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 TTTY13Q9BZ97 58 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 IGLV4-3A0A075B6K6 122 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 A6NDN8 102 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 HERVK_113P61574 105 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 SPANXA1Q9NS26 97 aa5.5□□□□□ -1.53
USP28-205ENST00000537706 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
USP28-205ENST00000537706 TAX1BP3O14907 124 aa5.49□□□□□ -1.53
USP28-205ENST00000537706 IGLV7-43P04211 117 aa5.49□□□□□ -1.53
USP28-205ENST00000537706 HIGD2BQ4VC39 106 aa5.49□□□□□ -1.53
USP28-205ENST00000537706 MYMXA0A1B0GTQ4 84 aa5.48□□□□□ -1.53
USP28-205ENST00000537706 COTL1Q14019 142 aa5.48□□□□□ -1.53
USP28-205ENST00000537706 TAL2Q16559 108 aa5.48□□□□□ -1.53
USP28-205ENST00000537706 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
USP28-205ENST00000537706 AMELXQ99217 191 aa5.48□□□□□ -1.53
USP28-205ENST00000537706 VCX2Q9H322 139 aa5.48□□□□□ -1.53
USP28-205ENST00000537706 C15orf56Q8N910 161 aa5.47□□□□□ -1.53
USP28-205ENST00000537706 OPRPNQ99935 248 aaPredicted RBP5.47□□□□□ -1.53
USP28-205ENST00000537706 UBE2D4Q9Y2X8 147 aa5.47□□□□□ -1.53
USP28-205ENST00000537706 TMEM170BQ5T4T1 132 aa5.46□□□□□ -1.53
USP28-205ENST00000537706 Q6ZVH6 145 aa5.46□□□□□ -1.53
USP28-205ENST00000537706 FAM104AQ969W3 186 aa5.46□□□□□ -1.53
USP28-205ENST00000537706 CARD19Q96LW7 228 aa5.46□□□□□ -1.53
USP28-205ENST00000537706 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.53
USP28-205ENST00000537706 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.54
USP28-205ENST00000537706 ZNF815PA8K554 130 aa5.46□□□□□ -1.54
USP28-205ENST00000537706 H3BRM9 83 aa5.46□□□□□ -1.54
USP28-205ENST00000537706 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
USP28-205ENST00000537706 MRPS36P82909 103 aaKnown RBP5.46□□□□□ -1.54
USP28-205ENST00000537706 CEND1Q8N111 149 aa5.46□□□□□ -1.54
USP28-205ENST00000537706 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.45□□□□□ -1.54
USP28-205ENST00000537706 TMEM223A0PJW6 202 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms