RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 LSM5Q9Y4Y9 91 aaKnown RBP1.92□□□□□ -2.1
YBX3-205ENST00000536107 TRBV30A0A0K0K1B3 111 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 A0A1W2PPV4 95 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 C17orf112F2Z3M2 114 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 HMGB3O15347 200 aaKnown RBP1.91□□□□□ -2.1
YBX3-205ENST00000536107 NCR2O95944 276 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 SULT1A1P50225 295 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 ATP6V1FQ16864 119 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 RNASE13Q5GAN3 156 aaKnown RBP1.91□□□□□ -2.1
YBX3-205ENST00000536107 ATP11AUNQ6ZP68 121 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 Q86TA4 180 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 NKAPP1Q8N9T2 125 aa1.91□□□□□ -2.1
YBX3-205ENST00000536107 UPK1BO75841 260 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 PMCHP20382 165 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 PVALBP20472 110 aaPredicted RBP1.9□□□□□ -2.11
YBX3-205ENST00000536107 S100A5P33763 92 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 FOXA3P55318 350 aaPredicted RBP1.9□□□□□ -2.11
YBX3-205ENST00000536107 DEFA1P59665 94 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 LSM3P62310 102 aaKnown RBP1.9□□□□□ -2.11
YBX3-205ENST00000536107 SSBP1Q04837 148 aaKnown RBP1.9□□□□□ -2.11
YBX3-205ENST00000536107 C6orf99Q4VX62 202 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 C2orf82Q6UX34 121 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 SSBP3-AS1Q7Z2R9 100 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 MRAP2Q96G30 205 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 GEMIN7Q9H840 131 aaKnown RBP1.9□□□□□ -2.11
YBX3-205ENST00000536107 TMEM242Q9NWH2 141 aa1.9□□□□□ -2.11
YBX3-205ENST00000536107 TMEM238C9JI98 176 aa1.89□□□□□ -2.11
YBX3-205ENST00000536107 FAM231DQ6ZW35 169 aa1.89□□□□□ -2.11
YBX3-205ENST00000536107 C11orf52Q96A22 123 aa1.89□□□□□ -2.11
YBX3-205ENST00000536107 LIMD2Q9BT23 127 aa1.89□□□□□ -2.11
YBX3-205ENST00000536107 TMEM126AQ9H061 195 aa1.89□□□□□ -2.11
YBX3-205ENST00000536107 IGSF23A1L1A6 192 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 RAB19A4D1S5 217 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 I3L3M4 83 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 SCO1O75880 301 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 S100A6P06703 90 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 CKS1BP61024 79 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 UBE2G1P62253 170 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 MRPS10P82664 201 aaKnown RBP1.88□□□□□ -2.11
YBX3-205ENST00000536107 SMAGPQ0VAQ4 97 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 C9orf153Q5TBE3 101 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 HRCT1Q6UXD1 115 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 VCX3BQ9H321 246 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 NUDT15Q9NV35 164 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 ZFP30Q9Y2G7 519 aa1.88□□□□□ -2.11
YBX3-205ENST00000536107 C9orf170A2RU37 121 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 SDHAF1A6NFY7 115 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 SNAI2O43623 268 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 ARL14EPLP0DKL9 152 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 FAUP35544 74 aaKnown RBP1.87□□□□□ -2.11
YBX3-205ENST00000536107 MRPL52Q86TS9 123 aaKnown RBP1.87□□□□□ -2.11
YBX3-205ENST00000536107 AKAP14Q86UN6 197 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 SLC7A5P1Q8MH63 180 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 SCGB1C1Q8TD33 95 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 CNBD2Q96M20 576 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 FAM218AQ96MZ4 157 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 WDR61Q9GZS3 305 aaKnown RBP1.87□□□□□ -2.11
YBX3-205ENST00000536107 TOMM7Q9P0U1 55 aa1.87□□□□□ -2.11
YBX3-205ENST00000536107 TGIF2-C20orf24A0A0A6YYL0 155 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 ANKRD20A5PA0PJZ0 165 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 C7orf77A4D0Y5 90 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 FAM74A7A6NL05 159 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 PEX7O00628 323 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 RGS5O15539 181 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 TRGC1P0CF51 173 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 VBP1P61758 197 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 KIAA0087Q14695 138 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 NEDD8Q15843 81 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 FAM74A3Q4VXF1 159 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 FAM19A3Q7Z5A8 133 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 SMIM4Q8WVI0 70 aa1.86□□□□□ -2.11
YBX3-205ENST00000536107 RPL39LQ96EH5 51 aaKnown RBP1.86□□□□□ -2.11
YBX3-205ENST00000536107 CSDC2Q9Y534 153 aaKnown RBP1.86□□□□□ -2.11
YBX3-205ENST00000536107 IGHV3OR16-9A0A0B4J2B5 98 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 M0R378 163 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 CXCL1P09341 107 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 GCHFRP30047 84 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 FCER1GP30273 86 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 AQP4P55087 323 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 Q6ZUT4 128 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 GATD1Q8NB37 220 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 SMCR5Q8TEV8 140 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 RAB26Q9ULW5 256 aa1.85□□□□□ -2.11
YBX3-205ENST00000536107 HSBP1L1C9JCN9 74 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 IFNA1P01562 189 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 HIST1H2BAQ96A08 127 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 FMC1Q96HJ9 113 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 TMEM167BQ9NRX6 74 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 MED9Q9NWA0 146 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 RBM12B-AS1Q9P1G2 102 aa1.84□□□□□ -2.11
YBX3-205ENST00000536107 A8MWP4 228 aa1.83□□□□□ -2.12
YBX3-205ENST00000536107 CDC34P49427 236 aaPredicted RBP1.83□□□□□ -2.12
YBX3-205ENST00000536107 AP3S2P59780 193 aa1.83□□□□□ -2.12
YBX3-205ENST00000536107 RAB5BP61020 215 aa1.83□□□□□ -2.12
YBX3-205ENST00000536107 LINC00483Q53H64 154 aa1.83□□□□□ -2.12
YBX3-205ENST00000536107 SMIM15Q7Z3B0 74 aa1.83□□□□□ -2.12
YBX3-205ENST00000536107 LINC01561Q8N1V8 128 aa1.83□□□□□ -2.12
YBX3-205ENST00000536107 DEDD2Q8WXF8 326 aa1.83□□□□□ -2.12
YBX3-205ENST00000536107 RNASE7Q9H1E1 156 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms