RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.71
CDCA3-205ENST00000535871 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
CDCA3-205ENST00000535871 MIEN1Q9BRT3 115 aa4.34□□□□□ -1.71
CDCA3-205ENST00000535871 LGALS3P17931 250 aaKnown RBP4.33□□□□□ -1.72
CDCA3-205ENST00000535871 COX17Q14061 63 aa4.33□□□□□ -1.72
CDCA3-205ENST00000535871 Q8N3U1 123 aa4.33□□□□□ -1.72
CDCA3-205ENST00000535871 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
CDCA3-205ENST00000535871 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
CDCA3-205ENST00000535871 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
CDCA3-205ENST00000535871 IGKV2D-26A0A0A0MRZ7 120 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 IGKV3OR2-268A0A0C4DH90 116 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 PRSS2P07478 247 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
CDCA3-205ENST00000535871 KIAA0087Q14695 138 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 TAL2Q16559 108 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 NDUFA12Q9UI09 145 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 STARD9Q9P2P6 4700 aa4.32□□□□□ -1.72
CDCA3-205ENST00000535871 IGKV2D-24A0A075B6R9 120 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 ZNF815PA8K554 130 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 SPINK8P0C7L1 97 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 MAJINQ3KP22 176 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 C5orf38Q86SI9 138 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 SPANXB1Q9NS25 103 aaPredicted RBP4.31□□□□□ -1.72
CDCA3-205ENST00000535871 TP73-AS1Q9UF72 201 aa4.31□□□□□ -1.72
CDCA3-205ENST00000535871 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
CDCA3-205ENST00000535871 IGLV10-54A0A075B6I4 117 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 LOC107984156A0A0G2JMH3 177 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 IFITM1P13164 125 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 DDTP30046 118 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 CKS1BP61024 79 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
CDCA3-205ENST00000535871 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 ARL17AQ8IVW1 177 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 C6orf223Q8N319 242 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 NTN5Q8WTR8 489 aaPredicted RBP4.3□□□□□ -1.72
CDCA3-205ENST00000535871 ORAOV1Q8WV07 137 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 C14orf144Q96I85 54 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
CDCA3-205ENST00000535871 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 CNBPP62633 177 aaKnown RBP4.29□□□□□ -1.72
CDCA3-205ENST00000535871 SPAG11BQ08648 103 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 UBE2V1Q13404 147 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 SCGB1D4Q6XE38 83 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 C15orf56Q8N910 161 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 SPANXDQ9BXN6 97 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 Q9HAA7 133 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 SPANXCQ9NY87 97 aa4.29□□□□□ -1.72
CDCA3-205ENST00000535871 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.28□□□□□ -1.72
CDCA3-205ENST00000535871 M0R143 59 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 PSCAO43653 123 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 LY6G6CO95867 125 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
CDCA3-205ENST00000535871 HSD52Q0P140 79 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 C1orf134Q5TEV5 83 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 C2orf91Q6ZV80 131 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 MAPKAPK5-AS1Q8N8E1 139 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 LYSTQ99698 3801 aa4.28□□□□□ -1.72
CDCA3-205ENST00000535871 LCE6AA0A183 80 aa4.27□□□□□ -1.73
CDCA3-205ENST00000535871 LRCOL1A6NCL2 159 aa4.27□□□□□ -1.73
CDCA3-205ENST00000535871 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
CDCA3-205ENST00000535871 LBHQ53QV2 105 aaPredicted RBP4.27□□□□□ -1.73
CDCA3-205ENST00000535871 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
CDCA3-205ENST00000535871 TOMM7Q9P0U1 55 aa4.27□□□□□ -1.73
CDCA3-205ENST00000535871 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
CDCA3-205ENST00000535871 DNAH1Q9P2D7 4330 aa4.26□□□□□ -1.73
CDCA3-205ENST00000535871 NDUFC2-KCTD14E9PQ53 114 aa4.26□□□□□ -1.73
CDCA3-205ENST00000535871 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
CDCA3-205ENST00000535871 CAMK2N2Q96S95 79 aa4.26□□□□□ -1.73
CDCA3-205ENST00000535871 LITAFQ99732 161 aa4.26□□□□□ -1.73
CDCA3-205ENST00000535871 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
CDCA3-205ENST00000535871 ERG28Q9UKR5 140 aa4.26□□□□□ -1.73
CDCA3-205ENST00000535871 NDUFC2O95298 119 aa4.25□□□□□ -1.73
CDCA3-205ENST00000535871 KMT2AQ03164 3969 aa4.25□□□□□ -1.73
CDCA3-205ENST00000535871 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
CDCA3-205ENST00000535871 LINC00336Q6ZUF6 198 aa4.25□□□□□ -1.73
CDCA3-205ENST00000535871 CARD19Q96LW7 228 aa4.25□□□□□ -1.73
CDCA3-205ENST00000535871 HIST1H4GQ99525 98 aa4.25□□□□□ -1.73
CDCA3-205ENST00000535871 TTTY13Q9BZ97 58 aa4.25□□□□□ -1.73
CDCA3-205ENST00000535871 ALMS1Q8TCU4 4167 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 A0A087WTM6 91 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 GAGE2BQ13066 116 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 GAGE2EQ4V326 116 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 GAGE2AQ6NT46 116 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 UNQ6190/PRO20217Q6UXQ8 127 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 CEND1Q8N111 149 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 Q8N814 137 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 GAGE2DQ9UEU5 116 aa4.24□□□□□ -1.73
CDCA3-205ENST00000535871 A6NDN8 102 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 LINC00158P58513 81 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 CTAG1AP78358 180 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 C2orf82Q6UX34 121 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 219.4 ms