RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 DAND5Q8N907 189 aa14.1□□□□□ -0.15
PDXDC1-205ENST00000535621 C9orf118A6NHY6 69 aa14.09□□□□□ -0.15
PDXDC1-205ENST00000535621 RPL24P83731 157 aaKnown RBP14.09□□□□□ -0.15
PDXDC1-205ENST00000535621 MEIG1Q5JSS6 88 aa14.09□□□□□ -0.15
PDXDC1-205ENST00000535621 A4D1N5 150 aa14.08□□□□□ -0.15
PDXDC1-205ENST00000535621 KIAA0087Q14695 138 aa14.08□□□□□ -0.15
PDXDC1-205ENST00000535621 A0A0U1RRA0 63 aa14.08□□□□□ -0.16
PDXDC1-205ENST00000535621 SFTA2Q6UW10 78 aa14.08□□□□□ -0.16
PDXDC1-205ENST00000535621 APLNQ9ULZ1 77 aa14.08□□□□□ -0.16
PDXDC1-205ENST00000535621 CFC1BP0CG36 223 aa14.07□□□□□ -0.16
PDXDC1-205ENST00000535621 CFC1P0CG37 223 aa14.07□□□□□ -0.16
PDXDC1-205ENST00000535621 KRTAP26-1Q6PEX3 210 aa14.07□□□□□ -0.16
PDXDC1-205ENST00000535621 UPK3BQ9BT76 320 aa14.07□□□□□ -0.16
PDXDC1-205ENST00000535621 NPC2P61916 151 aa14.06□□□□□ -0.16
PDXDC1-205ENST00000535621 H3BUT2 72 aa14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 APOMO95445 188 aa14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 IFITM1P13164 125 aa14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 NAA38Q9BRA0 125 aaKnown RBP14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 KLK5Q9Y337 293 aaPredicted RBP14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 DNAH1Q9P2D7 4330 aa14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 C2orf82Q6UX34 121 aa14.05□□□□□ -0.16
PDXDC1-205ENST00000535621 LINC00308Q8TCZ7 52 aa14.03□□□□□ -0.16
PDXDC1-205ENST00000535621 NUPR2A6NF83 97 aa14.03□□□□□ -0.16
PDXDC1-205ENST00000535621 IBA57-AS1B1ANH7 110 aa14.03□□□□□ -0.16
PDXDC1-205ENST00000535621 CKS1BP61024 79 aa14.03□□□□□ -0.16
PDXDC1-205ENST00000535621 CFAP161Q6P656 301 aa14.03□□□□□ -0.16
PDXDC1-205ENST00000535621 CXCL5P42830 114 aa14.02□□□□□ -0.17
PDXDC1-205ENST00000535621 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-205ENST00000535621 C1orf43Q9BWL3 253 aa14.01□□□□□ -0.17
PDXDC1-205ENST00000535621 SPAG11BQ08648 103 aa14□□□□□ -0.17
PDXDC1-205ENST00000535621 VAMP3Q15836 100 aa14□□□□□ -0.17
PDXDC1-205ENST00000535621 SOSTDC1Q6X4U4 206 aa14□□□□□ -0.17
PDXDC1-205ENST00000535621 A0A0B4J2C4 111 aa14□□□□□ -0.17
PDXDC1-205ENST00000535621 ERG28Q9UKR5 140 aa14□□□□□ -0.17
PDXDC1-205ENST00000535621 A0A1W2PPM0 123 aa13.99□□□□□ -0.17
PDXDC1-205ENST00000535621 LINC00158P58513 81 aa13.99□□□□□ -0.17
PDXDC1-205ENST00000535621 MIR7-3HGQ8N6C7 128 aa13.99□□□□□ -0.17
PDXDC1-205ENST00000535621 PGPEP1Q9NXJ5 209 aa13.99□□□□□ -0.17
PDXDC1-205ENST00000535621 IGKV2D-24A0A075B6R9 120 aa13.98□□□□□ -0.17
PDXDC1-205ENST00000535621 PRO1854Q9UHT4 67 aa13.98□□□□□ -0.17
PDXDC1-205ENST00000535621 PFN2P35080 140 aa13.98□□□□□ -0.17
PDXDC1-205ENST00000535621 COPS9Q8WXC6 57 aa13.98□□□□□ -0.17
PDXDC1-205ENST00000535621 Q9HAA7 133 aa13.98□□□□□ -0.17
PDXDC1-205ENST00000535621 C6orf223Q8N319 242 aa13.97□□□□□ -0.17
PDXDC1-205ENST00000535621 PPDPFQ9H3Y8 114 aa13.97□□□□□ -0.17
PDXDC1-205ENST00000535621 LINC00526Q96FQ7 95 aa13.97□□□□□ -0.17
PDXDC1-205ENST00000535621 TSPAN13O95857 204 aa13.96□□□□□ -0.17
PDXDC1-205ENST00000535621 MUC7Q8TAX7 377 aa13.95□□□□□ -0.18
PDXDC1-205ENST00000535621 FABP2P12104 132 aa13.94□□□□□ -0.18
PDXDC1-205ENST00000535621 UBE2V1Q13404 147 aa13.94□□□□□ -0.18
PDXDC1-205ENST00000535621 C10orf25Q5T742 122 aa13.93□□□□□ -0.18
PDXDC1-205ENST00000535621 UNQ6190/PRO20217Q6UXQ8 127 aa13.93□□□□□ -0.18
PDXDC1-205ENST00000535621 UBE2DNLQ8IWF7 75 aa13.93□□□□□ -0.18
PDXDC1-205ENST00000535621 C15orf56Q8N910 161 aa13.93□□□□□ -0.18
PDXDC1-205ENST00000535621 NTN5Q8WTR8 489 aaPredicted RBP13.93□□□□□ -0.18
PDXDC1-205ENST00000535621 VPS13DQ5THJ4 4388 aa13.93□□□□□ -0.18
PDXDC1-205ENST00000535621 COX17Q14061 63 aa13.93□□□□□ -0.18
PDXDC1-205ENST00000535621 C9orf116Q5BN46 136 aaPredicted RBP13.91□□□□□ -0.18
PDXDC1-205ENST00000535621 HIGD2BQ4VC39 106 aa13.9□□□□□ -0.18
PDXDC1-205ENST00000535621 WWC2-AS2Q96NR7 200 aa13.9□□□□□ -0.18
PDXDC1-205ENST00000535621 GAGE10A6NGK3 116 aa13.9□□□□□ -0.18
PDXDC1-205ENST00000535621 ZNF561-AS1K7EIQ3 104 aa13.9□□□□□ -0.18
PDXDC1-205ENST00000535621 KRTAP1-5Q9BYS1 174 aa13.9□□□□□ -0.18
PDXDC1-205ENST00000535621 SPCS1Q9Y6A9 102 aa13.9□□□□□ -0.18
PDXDC1-205ENST00000535621 K7EP34 96 aa13.89□□□□□ -0.19
PDXDC1-205ENST00000535621 GVQW2A0A096LPI5 108 aaPredicted RBP13.88□□□□□ -0.19
PDXDC1-205ENST00000535621 H7C2G1 150 aa13.87□□□□□ -0.19
PDXDC1-205ENST00000535621 GTF2H5Q6ZYL4 71 aa13.87□□□□□ -0.19
PDXDC1-205ENST00000535621 RMI2Q96E14 147 aa13.87□□□□□ -0.19
PDXDC1-205ENST00000535621 SND1-IT1Q9HBX3 110 aa13.87□□□□□ -0.19
PDXDC1-205ENST00000535621 DNAH10Q8IVF4 4471 aa13.87□□□□□ -0.19
PDXDC1-205ENST00000535621 C6orf48Q9UBA6 75 aa13.86□□□□□ -0.19
PDXDC1-205ENST00000535621 LOC107984156A0A0G2JMH3 177 aa13.85□□□□□ -0.19
PDXDC1-205ENST00000535621 ARL17AQ8IVW1 177 aa13.85□□□□□ -0.19
PDXDC1-205ENST00000535621 C2orf48Q96LS8 159 aa13.85□□□□□ -0.19
PDXDC1-205ENST00000535621 CAMK2N2Q96S95 79 aa13.85□□□□□ -0.19
PDXDC1-205ENST00000535621 CASC10Q5T4H9 136 aa13.84□□□□□ -0.19
PDXDC1-205ENST00000535621 Q1RN00 199 aa13.83□□□□□ -0.2
PDXDC1-205ENST00000535621 IGKV2-28A0A075B6P5 120 aa13.83□□□□□ -0.2
PDXDC1-205ENST00000535621 IGKV2D-28P01615 120 aa13.83□□□□□ -0.2
PDXDC1-205ENST00000535621 RPL13AP40429 203 aaKnown RBP13.83□□□□□ -0.2
PDXDC1-205ENST00000535621 TRBV30A0A0K0K1B3 111 aa13.82□□□□□ -0.2
PDXDC1-205ENST00000535621 Q6ZRU5 148 aa13.81□□□□□ -0.2
PDXDC1-205ENST00000535621 PSMB2P49721 201 aa13.8□□□□□ -0.2
PDXDC1-205ENST00000535621 KMT2AQ03164 3969 aa13.8□□□□□ -0.2
PDXDC1-205ENST00000535621 F8WDY8 70 aa13.8□□□□□ -0.2
PDXDC1-205ENST00000535621 LINC00337Q8N6G1 96 aa13.8□□□□□ -0.2
PDXDC1-205ENST00000535621 USP17L23D6RBM5 183 aa13.79□□□□□ -0.2
PDXDC1-205ENST00000535621 LYRM7Q5U5X0 104 aa13.78□□□□□ -0.2
PDXDC1-205ENST00000535621 TRAV13-2A0A0B4J235 113 aa13.78□□□□□ -0.2
PDXDC1-205ENST00000535621 TRIAP1O43715 76 aa13.78□□□□□ -0.2
PDXDC1-205ENST00000535621 SCGB1C2P0DMR2 95 aa13.77□□□□□ -0.21
PDXDC1-205ENST00000535621 H3BMG7 143 aa13.76□□□□□ -0.21
PDXDC1-205ENST00000535621 SYCNQ0VAF6 134 aa13.75□□□□□ -0.21
PDXDC1-205ENST00000535621 M0R2N4 97 aa13.74□□□□□ -0.21
PDXDC1-205ENST00000535621 NDUFC2O95298 119 aa13.74□□□□□ -0.21
PDXDC1-205ENST00000535621 NBDYA0A0U1RRE5 68 aa13.74□□□□□ -0.21
PDXDC1-205ENST00000535621 TCL1BO95988 128 aa13.74□□□□□ -0.21
PDXDC1-205ENST00000535621 TRBV20-1A0A075B6N2 111 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms