RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PRR4Q16378 134 aa8.03□□□□□ -1.12
CLSTN3-205ENST00000535452 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
CLSTN3-205ENST00000535452 SMCO4Q9NRQ5 59 aa8.03□□□□□ -1.12
CLSTN3-205ENST00000535452 A0A1B0GVG6 124 aa8.02□□□□□ -1.13
CLSTN3-205ENST00000535452 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-205ENST00000535452 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
CLSTN3-205ENST00000535452 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
CLSTN3-205ENST00000535452 TNXBP22105 4242 aa8.02□□□□□ -1.13
CLSTN3-205ENST00000535452 H3BRM9 83 aa8.01□□□□□ -1.13
CLSTN3-205ENST00000535452 ERASQ7Z444 233 aa8.01□□□□□ -1.13
CLSTN3-205ENST00000535452 MRPL55Q7Z7F7 128 aaKnown RBP8.01□□□□□ -1.13
CLSTN3-205ENST00000535452 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
CLSTN3-205ENST00000535452 CDKN2A-AS1Q9UH64 79 aa8.01□□□□□ -1.13
CLSTN3-205ENST00000535452 TRAV9-1A0A075B6T8 112 aa8□□□□□ -1.13
CLSTN3-205ENST00000535452 IGIPA6NJ69 53 aa8□□□□□ -1.13
CLSTN3-205ENST00000535452 PDZD11Q5EBL8 140 aa8□□□□□ -1.13
CLSTN3-205ENST00000535452 ZC2HC1BQ5TFG8 222 aa8□□□□□ -1.13
CLSTN3-205ENST00000535452 FAM19A3Q7Z5A8 133 aa8□□□□□ -1.13
CLSTN3-205ENST00000535452 TOMM6Q96B49 74 aa8□□□□□ -1.13
CLSTN3-205ENST00000535452 TP73-AS1Q9UF72 201 aa8□□□□□ -1.13
CLSTN3-205ENST00000535452 A0A0U1RQV1 116 aa7.99□□□□□ -1.13
CLSTN3-205ENST00000535452 ATP5LO75964 103 aa7.99□□□□□ -1.13
CLSTN3-205ENST00000535452 COX19Q49B96 90 aa7.99□□□□□ -1.13
CLSTN3-205ENST00000535452 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
CLSTN3-205ENST00000535452 COX7B2Q8TF08 81 aa7.99□□□□□ -1.13
CLSTN3-205ENST00000535452 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
CLSTN3-205ENST00000535452 CRYGAP11844 174 aa7.98□□□□□ -1.13
CLSTN3-205ENST00000535452 UBE2AP49459 152 aa7.98□□□□□ -1.13
CLSTN3-205ENST00000535452 LINC00173Q6ZV60 143 aa7.98□□□□□ -1.13
CLSTN3-205ENST00000535452 MRPL18Q9H0U6 180 aaKnown RBP7.98□□□□□ -1.13
CLSTN3-205ENST00000535452 BCE1O60756 84 aa7.97□□□□□ -1.13
CLSTN3-205ENST00000535452 KIAA1644Q3SXP7 199 aa7.96□□□□□ -1.14
CLSTN3-205ENST00000535452 UQCC3Q6UW78 93 aa7.96□□□□□ -1.14
CLSTN3-205ENST00000535452 KRTAP11-1Q8IUC1 163 aa7.96□□□□□ -1.14
CLSTN3-205ENST00000535452 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
CLSTN3-205ENST00000535452 NDUFA6P56556 154 aa7.95□□□□□ -1.14
CLSTN3-205ENST00000535452 RAB5BP61020 215 aa7.95□□□□□ -1.14
CLSTN3-205ENST00000535452 PMVKQ15126 192 aa7.95□□□□□ -1.14
CLSTN3-205ENST00000535452 LRP2P98164 4655 aa7.94□□□□□ -1.14
CLSTN3-205ENST00000535452 TSPAN13O95857 204 aa7.94□□□□□ -1.14
CLSTN3-205ENST00000535452 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
CLSTN3-205ENST00000535452 GAGE10A6NGK3 116 aa7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 RPL37AP8A6NKH3 93 aa7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 CLLU1Q5K131 121 aa7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 SFTA2Q6UW10 78 aa7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 KRTAP7-1Q8IUC3 87 aa7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
CLSTN3-205ENST00000535452 SPINK8P0C7L1 97 aa7.92□□□□□ -1.14
CLSTN3-205ENST00000535452 FABP9Q0Z7S8 132 aa7.92□□□□□ -1.14
CLSTN3-205ENST00000535452 CST9LQ9H4G1 147 aa7.92□□□□□ -1.14
CLSTN3-205ENST00000535452 LINC00167Q96N53 147 aa7.91□□□□□ -1.14
CLSTN3-205ENST00000535452 IGKV2D-26A0A0A0MRZ7 120 aa7.9□□□□□ -1.14
CLSTN3-205ENST00000535452 TMEM218A2RU14 115 aa7.9□□□□□ -1.14
CLSTN3-205ENST00000535452 PFN2P35080 140 aa7.9□□□□□ -1.14
CLSTN3-205ENST00000535452 IGLV5-45A0A087WSX0 123 aa7.89□□□□□ -1.15
CLSTN3-205ENST00000535452 ADCYAP1P18509 176 aa7.89□□□□□ -1.15
CLSTN3-205ENST00000535452 SEC11CQ9BY50 192 aa7.89□□□□□ -1.15
CLSTN3-205ENST00000535452 RNF213Q63HN8 5207 aa7.88□□□□□ -1.15
CLSTN3-205ENST00000535452 ATP6V1G1O75348 118 aa7.88□□□□□ -1.15
CLSTN3-205ENST00000535452 COX17Q14061 63 aa7.88□□□□□ -1.15
CLSTN3-205ENST00000535452 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
CLSTN3-205ENST00000535452 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
CLSTN3-205ENST00000535452 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
CLSTN3-205ENST00000535452 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
CLSTN3-205ENST00000535452 S100A12P80511 92 aa7.86□□□□□ -1.15
CLSTN3-205ENST00000535452 RHEBQ15382 184 aa7.86□□□□□ -1.15
CLSTN3-205ENST00000535452 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
CLSTN3-205ENST00000535452 RPS10P5Q9NQ39 176 aa7.86□□□□□ -1.15
CLSTN3-205ENST00000535452 ERG28Q9UKR5 140 aa7.86□□□□□ -1.15
CLSTN3-205ENST00000535452 LINC01546A6NGU7 62 aa7.85□□□□□ -1.15
CLSTN3-205ENST00000535452 HBDP02042 147 aa7.85□□□□□ -1.15
CLSTN3-205ENST00000535452 TMEM170BQ5T4T1 132 aa7.85□□□□□ -1.15
CLSTN3-205ENST00000535452 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
CLSTN3-205ENST00000535452 IGLC3P0DOY3 106 aa7.84□□□□□ -1.15
CLSTN3-205ENST00000535452 TRAPPC1Q9Y5R8 145 aa7.84□□□□□ -1.15
CLSTN3-205ENST00000535452 A0A087X002 238 aa7.83□□□□□ -1.16
CLSTN3-205ENST00000535452 LINC00614P0C842 121 aa7.83□□□□□ -1.16
CLSTN3-205ENST00000535452 NDUFA5Q16718 116 aa7.83□□□□□ -1.16
CLSTN3-205ENST00000535452 LINC00158P58513 81 aa7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 C4orf48Q5BLP8 95 aa7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 COMMD7Q86VX2 200 aa7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 BAGE3Q86Y29 109 aa7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 CBLN2Q8IUK8 224 aa7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 CDIP1Q9H305 208 aa7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 SND1-IT1Q9HBX3 110 aa7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
CLSTN3-205ENST00000535452 PRLHP81277 87 aa7.81□□□□□ -1.16
CLSTN3-205ENST00000535452 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
CLSTN3-205ENST00000535452 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
CLSTN3-205ENST00000535452 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
CLSTN3-205ENST00000535452 ZNF22P17026 224 aaPredicted RBP7.8□□□□□ -1.16
CLSTN3-205ENST00000535452 CTAG1AP78358 180 aa7.8□□□□□ -1.16
CLSTN3-205ENST00000535452 HIGD2AQ9BW72 106 aa7.8□□□□□ -1.16
CLSTN3-205ENST00000535452 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
CLSTN3-205ENST00000535452 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
CLSTN3-205ENST00000535452 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
CLSTN3-205ENST00000535452 CHTOPQ9Y3Y2 248 aaKnown RBP7.79□□□□□ -1.16
CLSTN3-205ENST00000535452 SPAG11AQ6PDA7 123 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms