RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 C6orf48Q9UBA6 75 aa8.39□□□□□ -1.07
TMEM258-202ENST00000535042 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
TMEM258-202ENST00000535042 IGLV5-39A0A0G2JS06 123 aa8.38□□□□□ -1.07
TMEM258-202ENST00000535042 PRSS2P07478 247 aa8.38□□□□□ -1.07
TMEM258-202ENST00000535042 C6orf226Q5I0X4 101 aa8.38□□□□□ -1.07
TMEM258-202ENST00000535042 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
TMEM258-202ENST00000535042 PMCHL2Q9BQD1 86 aa8.38□□□□□ -1.07
TMEM258-202ENST00000535042 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
TMEM258-202ENST00000535042 DNAH8Q96JB1 4490 aa8.38□□□□□ -1.07
TMEM258-202ENST00000535042 A0A096LNI7 61 aa8.37□□□□□ -1.07
TMEM258-202ENST00000535042 SYS1-DBNDD2H3BUS1 97 aa8.37□□□□□ -1.07
TMEM258-202ENST00000535042 CIRBPQ14011 172 aaKnown RBP8.37□□□□□ -1.07
TMEM258-202ENST00000535042 RNF151Q2KHN1 245 aa8.37□□□□□ -1.07
TMEM258-202ENST00000535042 SCXQ7RTU7 201 aa8.37□□□□□ -1.07
TMEM258-202ENST00000535042 RYR1P21817 5038 aa8.37□□□□□ -1.07
TMEM258-202ENST00000535042 TMEM223A0PJW6 202 aa8.36□□□□□ -1.07
TMEM258-202ENST00000535042 CIRBP-AS1Q8TBR5 109 aa8.36□□□□□ -1.07
TMEM258-202ENST00000535042 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
TMEM258-202ENST00000535042 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
TMEM258-202ENST00000535042 C3orf79P0CE67 100 aa8.35□□□□□ -1.07
TMEM258-202ENST00000535042 CKS1BP61024 79 aa8.35□□□□□ -1.07
TMEM258-202ENST00000535042 C9orf116Q5BN46 136 aaPredicted RBP8.35□□□□□ -1.07
TMEM258-202ENST00000535042 HIST3H2BBQ8N257 126 aa8.35□□□□□ -1.07
TMEM258-202ENST00000535042 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
TMEM258-202ENST00000535042 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
TMEM258-202ENST00000535042 DPM2O94777 84 aa8.34□□□□□ -1.07
TMEM258-202ENST00000535042 GAGE2BQ13066 116 aa8.34□□□□□ -1.07
TMEM258-202ENST00000535042 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-202ENST00000535042 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
TMEM258-202ENST00000535042 PLNP26678 52 aa8.33□□□□□ -1.08
TMEM258-202ENST00000535042 CXCL5P42830 114 aa8.33□□□□□ -1.08
TMEM258-202ENST00000535042 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
TMEM258-202ENST00000535042 MAJINQ3KP22 176 aa8.33□□□□□ -1.08
TMEM258-202ENST00000535042 LINC01545Q5VT33 79 aa8.33□□□□□ -1.08
TMEM258-202ENST00000535042 PET117Q6UWS5 81 aa8.33□□□□□ -1.08
TMEM258-202ENST00000535042 A0A087WYN8 130 aa8.32□□□□□ -1.08
TMEM258-202ENST00000535042 IGKCP01834 107 aa8.32□□□□□ -1.08
TMEM258-202ENST00000535042 S100A6P06703 90 aa8.32□□□□□ -1.08
TMEM258-202ENST00000535042 KRTDAPP60985 99 aa8.32□□□□□ -1.08
TMEM258-202ENST00000535042 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
TMEM258-202ENST00000535042 Q6ZRP5 223 aa8.32□□□□□ -1.08
TMEM258-202ENST00000535042 HIST1H2BLQ99880 126 aa8.32□□□□□ -1.08
TMEM258-202ENST00000535042 HERC2O95714 4834 aa8.32□□□□□ -1.08
TMEM258-202ENST00000535042 HSPG2P98160 4391 aa8.31□□□□□ -1.08
TMEM258-202ENST00000535042 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-202ENST00000535042 SNRPEP62304 92 aaKnown RBP8.31□□□□□ -1.08
TMEM258-202ENST00000535042 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
TMEM258-202ENST00000535042 PKIGQ9Y2B9 76 aa8.31□□□□□ -1.08
TMEM258-202ENST00000535042 PLAC8Q9NZF1 115 aa8.3□□□□□ -1.08
TMEM258-202ENST00000535042 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 S100A2P29034 98 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 TSPEAR-AS2P59090 65 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 GAGE2EQ4V326 116 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 Q8N1X5 172 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 STPG4Q8N801 248 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
TMEM258-202ENST00000535042 GAGE2DQ9UEU5 116 aa8.29□□□□□ -1.08
TMEM258-202ENST00000535042 J3QL48 77 aa8.28□□□□□ -1.08
TMEM258-202ENST00000535042 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
TMEM258-202ENST00000535042 LINC00474Q9P2X8 69 aa8.28□□□□□ -1.08
TMEM258-202ENST00000535042 LEPROTO15243 131 aa8.27□□□□□ -1.09
TMEM258-202ENST00000535042 C9orf129Q5T035 196 aaKnown RBP8.27□□□□□ -1.09
TMEM258-202ENST00000535042 EPM2AB3EWF7 344 aa8.26□□□□□ -1.09
TMEM258-202ENST00000535042 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
TMEM258-202ENST00000535042 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
TMEM258-202ENST00000535042 HERVK_113P61574 105 aa8.25□□□□□ -1.09
TMEM258-202ENST00000535042 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
TMEM258-202ENST00000535042 KRTAP7-1Q8IUC3 87 aa8.25□□□□□ -1.09
TMEM258-202ENST00000535042 PLEKHB2Q96CS7 222 aa8.25□□□□□ -1.09
TMEM258-202ENST00000535042 XAGE1AQ9HD64 81 aa8.25□□□□□ -1.09
TMEM258-202ENST00000535042 ERG28Q9UKR5 140 aa8.25□□□□□ -1.09
TMEM258-202ENST00000535042 C20orf202A1L168 122 aa8.24□□□□□ -1.09
TMEM258-202ENST00000535042 E9PLD3 99 aa8.24□□□□□ -1.09
TMEM258-202ENST00000535042 J3QQQ9 107 aa8.24□□□□□ -1.09
TMEM258-202ENST00000535042 PFN2P35080 140 aa8.24□□□□□ -1.09
TMEM258-202ENST00000535042 Q5VSD8 79 aa8.24□□□□□ -1.09
TMEM258-202ENST00000535042 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
TMEM258-202ENST00000535042 SFTA2Q6UW10 78 aa8.23□□□□□ -1.09
TMEM258-202ENST00000535042 ATOH7Q8N100 152 aa8.23□□□□□ -1.09
TMEM258-202ENST00000535042 IGKV2D-26A0A0A0MRZ7 120 aa8.22□□□□□ -1.09
TMEM258-202ENST00000535042 FAT1Q14517 4588 aa8.22□□□□□ -1.09
TMEM258-202ENST00000535042 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
TMEM258-202ENST00000535042 MYMXA0A1B0GTQ4 84 aa8.21□□□□□ -1.1
TMEM258-202ENST00000535042 FAM229AH3BQW9 127 aa8.21□□□□□ -1.1
TMEM258-202ENST00000535042 LGALS3P17931 250 aaKnown RBP8.21□□□□□ -1.1
TMEM258-202ENST00000535042 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
TMEM258-202ENST00000535042 SERTAD4-AS1Q5TG53 156 aa8.21□□□□□ -1.1
TMEM258-202ENST00000535042 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
TMEM258-202ENST00000535042 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
TMEM258-202ENST00000535042 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
TMEM258-202ENST00000535042 HERV-K104P63124 156 aa8.2□□□□□ -1.1
TMEM258-202ENST00000535042 COX17Q14061 63 aa8.2□□□□□ -1.1
TMEM258-202ENST00000535042 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
TMEM258-202ENST00000535042 PHF5AQ7RTV0 110 aaKnown RBP8.2□□□□□ -1.1
TMEM258-202ENST00000535042 LINC00158P58513 81 aa8.19□□□□□ -1.1
TMEM258-202ENST00000535042 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
TMEM258-202ENST00000535042 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
TMEM258-202ENST00000535042 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms