RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 CITED1Q99966 193 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 Q9H8V8 135 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CMYA5Q8N3K9 4069 aa4.08□□□□□ -1.76
TNFRSF1A-206ENST00000535038 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
TNFRSF1A-206ENST00000535038 MT-ATP8P03928 68 aa4.08□□□□□ -1.76
TNFRSF1A-206ENST00000535038 FAM222AQ5U5X8 452 aa4.08□□□□□ -1.76
TNFRSF1A-206ENST00000535038 UNC79Q9P2D8 2635 aa4.08□□□□□ -1.76
TNFRSF1A-206ENST00000535038 DNAH3Q8TD57 4116 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 ITPR2Q14571 2701 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 A0A087WZ39 114 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TRBV6-8A0A0A6YYG3 113 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TMEM262E9PQX1 116 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 H7C2G1 150 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 COX7A2LO14548 114 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 GAGE7O76087 117 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 GAGE12FP0CL80 117 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 GAGE12GP0CL81 117 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 GAGE12IP0CL82 117 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 RPL35AP18077 110 aaKnown RBP4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 CIRBPQ14011 172 aaKnown RBP4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 LINC01561Q8N1V8 128 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 DAND5Q8N907 189 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 C22orf24Q9Y442 160 aa4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 SETD2Q9BYW2 2564 aaPredicted RBP4.07□□□□□ -1.76
TNFRSF1A-206ENST00000535038 IGLV4-60A0A075B6I1 120 aa4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TRAV13-1A0A0B4J241 112 aa4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 FAM240AA0A1B0GVK7 77 aa4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 Q1RN00 199 aa4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 COX7B2Q8TF08 81 aa4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 COPS9Q8WXC6 57 aa4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 CLEC2BQ92478 149 aa4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 HELZ2Q9BYK8 2649 aaKnown RBP4.06□□□□□ -1.76
TNFRSF1A-206ENST00000535038 IGKV2-28A0A075B6P5 120 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TRGV2A0A075B6R0 118 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TEX49A0A1B0GTD5 131 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 SMIM9A6NGZ8 99 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 IGKV2D-28P01615 120 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TRACP01848 142 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 COX6CP09669 75 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 RPL28P46779 137 aaKnown RBP4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 NPC2P61916 151 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 GAGE6Q13070 117 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 MRPL23Q16540 153 aaKnown RBP4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 Q6Q795 121 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 C2orf82Q6UX34 121 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 UBE2WQ96B02 151 aa4.05□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TRAV26-1A0A087WT03 109 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 TRGV4A0A0C4DH28 118 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 IBA57-AS1B1ANH7 110 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 J3QKU1 62 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 UBE2L6O14933 153 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 KRTAP24-1Q3LI83 254 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 FAM218AQ96MZ4 157 aa4.04□□□□□ -1.76
TNFRSF1A-206ENST00000535038 NIPBLQ6KC79 2804 aaeCLIP4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 LYRM9A8MSI8 78 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 CRLF1O75462 422 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 LY6G6DO95868 133 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 CCL18P55774 89 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 MEIG1Q5JSS6 88 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 MIR7-3HGQ8N6C7 128 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 DNAH1Q9P2D7 4330 aa4.03□□□□□ -1.76
TNFRSF1A-206ENST00000535038 HIVEP2P31629 2446 aa4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 FN1P02751 2386 aaKnown RBP4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 TRAV13-2A0A0B4J235 113 aa4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 TRAV8-4A0A0B4J246 113 aa4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 A0A1B0GV72 72 aa4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 KIAA0087Q14695 138 aa4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 Q8IZM0 81 aa4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 PRO0255Q9UI72 69 aa4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 FASNP49327 2511 aaKnown RBP4.02□□□□□ -1.77
TNFRSF1A-206ENST00000535038 TRBV7-7A0A0K0K1E9 115 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 A0A0U1RRA0 63 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 CKS1BP61024 79 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 C9orf66Q5T8R8 295 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 OBSCN-AS1Q96MR7 158 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 LINC00167Q96N53 147 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 SMR3AQ99954 134 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 CHCHD5Q9BSY4 110 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 SND1-IT1Q9HBX3 110 aa4.01□□□□□ -1.77
TNFRSF1A-206ENST00000535038 NSD1Q96L73 2696 aaPredicted RBP4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 IGHV4-28A0A0C4DH34 117 aa4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 CRPP02741 224 aa4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 C5orf38Q86SI9 138 aa4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 C15orf53Q8NAA6 179 aa4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 Q8NAQ8 132 aa4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 WFDC9Q8NEX5 89 aa4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 SMIM11BQ8TCY0 68 aa4□□□□□ -1.77
TNFRSF1A-206ENST00000535038 NOTCH2Q04721 2471 aa3.99□□□□□ -1.77
TNFRSF1A-206ENST00000535038 NDUFC2O95298 119 aa3.99□□□□□ -1.77
TNFRSF1A-206ENST00000535038 ACYP1P07311 99 aa3.99□□□□□ -1.77
TNFRSF1A-206ENST00000535038 BAALC-AS2P0C853 105 aa3.99□□□□□ -1.77
TNFRSF1A-206ENST00000535038 DEFB130BP0DP73 79 aa3.99□□□□□ -1.77
TNFRSF1A-206ENST00000535038 DEFB130AP0DP74 79 aa3.99□□□□□ -1.77
TNFRSF1A-206ENST00000535038 VWFP04275 2813 aa3.98□□□□□ -1.77
TNFRSF1A-206ENST00000535038 H0YGX0 51 aa3.98□□□□□ -1.77
TNFRSF1A-206ENST00000535038 LINC00158P58513 81 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms