RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 HIST1H2BBP33778 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BDP58876 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BCP62807 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HERVK_113P63121 156 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST2H2BEQ16778 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 C7orf33Q8WU49 177 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BHQ93079 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BNQ99877 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BMQ99879 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 SEC11AP67812 179 aa11.17□□□□□ -0.62
CAPRIN1-217ENST00000534825 PMVKQ15126 192 aa11.17□□□□□ -0.62
CAPRIN1-217ENST00000534825 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
CAPRIN1-217ENST00000534825 NDUFA1O15239 70 aa11.16□□□□□ -0.62
CAPRIN1-217ENST00000534825 CDKN2A-AS1Q9UH64 79 aa11.16□□□□□ -0.62
CAPRIN1-217ENST00000534825 C6orf48Q9UBA6 75 aa11.15□□□□□ -0.62
CAPRIN1-217ENST00000534825 SERF1AO75920 110 aa11.14□□□□□ -0.63
CAPRIN1-217ENST00000534825 TLX1NBP0CAT3 122 aa11.14□□□□□ -0.63
CAPRIN1-217ENST00000534825 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
CAPRIN1-217ENST00000534825 IGLC3P0DOY3 106 aa11.13□□□□□ -0.63
CAPRIN1-217ENST00000534825 PRR3P79522 188 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-217ENST00000534825 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-217ENST00000534825 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
CAPRIN1-217ENST00000534825 ATP5LO75964 103 aa11.12□□□□□ -0.63
CAPRIN1-217ENST00000534825 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
CAPRIN1-217ENST00000534825 Q6ZRP5 223 aa11.12□□□□□ -0.63
CAPRIN1-217ENST00000534825 HSBP1O75506 76 aa11.11□□□□□ -0.63
CAPRIN1-217ENST00000534825 Q8IZM0 81 aa11.11□□□□□ -0.63
CAPRIN1-217ENST00000534825 GEMIN7Q9H840 131 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-217ENST00000534825 NUPR1O60356 82 aa11.1□□□□□ -0.63
CAPRIN1-217ENST00000534825 TRBV30A0A0K0K1B3 111 aa11.09□□□□□ -0.63
CAPRIN1-217ENST00000534825 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
CAPRIN1-217ENST00000534825 LINC00469Q8N7U9 141 aa11.09□□□□□ -0.63
CAPRIN1-217ENST00000534825 TRAV12-1A0A0B4J245 112 aa11.07□□□□□ -0.64
CAPRIN1-217ENST00000534825 IGLV5-39A0A0G2JS06 123 aa11.07□□□□□ -0.64
CAPRIN1-217ENST00000534825 MT1HL1P0DM35 61 aa11.07□□□□□ -0.64
CAPRIN1-217ENST00000534825 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-217ENST00000534825 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
CAPRIN1-217ENST00000534825 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 NDUFA6P56556 154 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 GAGE2EQ4V326 116 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 COA6Q5JTJ3 125 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 PHF5AQ7RTV0 110 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 KRTAP7-1Q8IUC3 87 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 IFI27L1Q96BM0 104 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 TOMM7Q9P0U1 55 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 GAGE2DQ9UEU5 116 aa11.06□□□□□ -0.64
CAPRIN1-217ENST00000534825 C11orf86A6NJI1 115 aa11.05□□□□□ -0.64
CAPRIN1-217ENST00000534825 PRSS2P07478 247 aa11.05□□□□□ -0.64
CAPRIN1-217ENST00000534825 PACRGQ96M98 296 aaPredicted RBP11.05□□□□□ -0.64
CAPRIN1-217ENST00000534825 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
CAPRIN1-217ENST00000534825 TNXBP22105 4242 aa11.03□□□□□ -0.64
CAPRIN1-217ENST00000534825 CXCL5P42830 114 aa11.03□□□□□ -0.64
CAPRIN1-217ENST00000534825 CKS1BP61024 79 aa11.03□□□□□ -0.64
CAPRIN1-217ENST00000534825 SPINK8P0C7L1 97 aa11.02□□□□□ -0.65
CAPRIN1-217ENST00000534825 C9orf129Q5T035 196 aaKnown RBP11.02□□□□□ -0.65
CAPRIN1-217ENST00000534825 SPINK6Q6UWN8 80 aa11.02□□□□□ -0.65
CAPRIN1-217ENST00000534825 PSORS1C2Q9UIG4 136 aa11.02□□□□□ -0.65
CAPRIN1-217ENST00000534825 F8VRH5 84 aa11.01□□□□□ -0.65
CAPRIN1-217ENST00000534825 H3BRM9 83 aa11.01□□□□□ -0.65
CAPRIN1-217ENST00000534825 ODF1Q14990 250 aa11.01□□□□□ -0.65
CAPRIN1-217ENST00000534825 KRTAP11-1Q8IUC1 163 aa11.01□□□□□ -0.65
CAPRIN1-217ENST00000534825 COX7B2Q8TF08 81 aa11.01□□□□□ -0.65
CAPRIN1-217ENST00000534825 LEPROTL1O95214 131 aa11□□□□□ -0.65
CAPRIN1-217ENST00000534825 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
CAPRIN1-217ENST00000534825 FABP4P15090 132 aa10.99□□□□□ -0.65
CAPRIN1-217ENST00000534825 LINC01600Q96MT4 127 aa10.99□□□□□ -0.65
CAPRIN1-217ENST00000534825 SERTAD4-AS1Q5TG53 156 aa10.98□□□□□ -0.65
CAPRIN1-217ENST00000534825 FAM19A5Q7Z5A7 132 aaPredicted RBP10.98□□□□□ -0.65
CAPRIN1-217ENST00000534825 HSPB8Q9UJY1 196 aa10.97□□□□□ -0.65
CAPRIN1-217ENST00000534825 S100A6P06703 90 aa10.96□□□□□ -0.65
CAPRIN1-217ENST00000534825 HMCN2Q8NDA2 5059 aa10.96□□□□□ -0.66
CAPRIN1-217ENST00000534825 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
CAPRIN1-217ENST00000534825 C1orf137Q5JT78 98 aa10.95□□□□□ -0.66
CAPRIN1-217ENST00000534825 H0Y8G0 127 aa10.94□□□□□ -0.66
CAPRIN1-217ENST00000534825 TMEM170BQ5T4T1 132 aa10.94□□□□□ -0.66
CAPRIN1-217ENST00000534825 HIST3H2BBQ8N257 126 aa10.94□□□□□ -0.66
CAPRIN1-217ENST00000534825 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
CAPRIN1-217ENST00000534825 M0QXV9 152 aa10.93□□□□□ -0.66
CAPRIN1-217ENST00000534825 KRTAP10-8P60410 259 aa10.93□□□□□ -0.66
CAPRIN1-217ENST00000534825 ZNF625Q96I27 306 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-217ENST00000534825 IGLV7-43P04211 117 aa10.92□□□□□ -0.66
CAPRIN1-217ENST00000534825 SNRPEP62304 92 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-217ENST00000534825 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
CAPRIN1-217ENST00000534825 MAP1LC3CQ9BXW4 147 aa10.91□□□□□ -0.66
CAPRIN1-217ENST00000534825 TMA7Q9Y2S6 64 aaKnown RBP10.91□□□□□ -0.66
CAPRIN1-217ENST00000534825 C22orf24Q9Y442 160 aa10.91□□□□□ -0.66
CAPRIN1-217ENST00000534825 C5orf52A6NGY3 159 aa10.9□□□□□ -0.66
CAPRIN1-217ENST00000534825 PLNP26678 52 aa10.9□□□□□ -0.66
CAPRIN1-217ENST00000534825 S100A2P29034 98 aa10.9□□□□□ -0.66
CAPRIN1-217ENST00000534825 SFTA2Q6UW10 78 aa10.89□□□□□ -0.67
CAPRIN1-217ENST00000534825 HIST1H2BLQ99880 126 aa10.89□□□□□ -0.67
CAPRIN1-217ENST00000534825 SYS1-DBNDD2H3BUS1 97 aa10.88□□□□□ -0.67
CAPRIN1-217ENST00000534825 C3orf79P0CE67 100 aa10.87□□□□□ -0.67
CAPRIN1-217ENST00000534825 UBE2BP63146 152 aa10.87□□□□□ -0.67
CAPRIN1-217ENST00000534825 DPM2O94777 84 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms