RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TRAV7A0A075B6U4 112 aa8.06□□□□□ -1.12
AMBRA1-211ENST00000533727 DHRS4-AS1Q9P1J3 65 aa8.06□□□□□ -1.12
AMBRA1-211ENST00000533727 CSDC2Q9Y534 153 aaKnown RBP8.05□□□□□ -1.12
AMBRA1-211ENST00000533727 WDR87Q6ZQQ6 2873 aa8.05□□□□□ -1.12
AMBRA1-211ENST00000533727 TET2Q6N021 2002 aaPredicted RBP8.05□□□□□ -1.12
AMBRA1-211ENST00000533727 H3BNG1 76 aa8.04□□□□□ -1.12
AMBRA1-211ENST00000533727 GAS8-AS1O95177 125 aa8.04□□□□□ -1.12
AMBRA1-211ENST00000533727 Q6ZQY7 126 aa8.04□□□□□ -1.12
AMBRA1-211ENST00000533727 CENPFP49454 3210 aa8.04□□□□□ -1.12
AMBRA1-211ENST00000533727 SMIM11BQ8TCY0 68 aa8.04□□□□□ -1.12
AMBRA1-211ENST00000533727 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
AMBRA1-211ENST00000533727 A0A1B0GUV1 79 aa8.03□□□□□ -1.12
AMBRA1-211ENST00000533727 PRR4Q16378 134 aa8.03□□□□□ -1.12
AMBRA1-211ENST00000533727 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
AMBRA1-211ENST00000533727 TANC2Q9HCD6 1990 aa8.03□□□□□ -1.12
AMBRA1-211ENST00000533727 PRM2P04554 102 aa8.03□□□□□ -1.12
AMBRA1-211ENST00000533727 LYPD5Q6UWN5 251 aa8.03□□□□□ -1.12
AMBRA1-211ENST00000533727 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
AMBRA1-211ENST00000533727 PMAIP1Q13794 54 aa8.02□□□□□ -1.13
AMBRA1-211ENST00000533727 PCNTO95613 3336 aa8.02□□□□□ -1.13
AMBRA1-211ENST00000533727 PCSK5Q92824 1860 aa8.02□□□□□ -1.13
AMBRA1-211ENST00000533727 KLK9Q2XQG4 91 aa8.02□□□□□ -1.13
AMBRA1-211ENST00000533727 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
AMBRA1-211ENST00000533727 C3orf84H3BNL1 204 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 POM121L12Q8N7R1 296 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 A0A087WVE0 104 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 WFDC10BQ8IUB3 73 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 PRR15LQ9BU68 103 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 SOSTDC1Q6X4U4 206 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 C2orf48Q96LS8 159 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 IGIPA6NJ69 53 aa8.01□□□□□ -1.13
AMBRA1-211ENST00000533727 ANKRD17O75179 2603 aaKnown RBP8□□□□□ -1.13
AMBRA1-211ENST00000533727 A0A096LNT2 108 aa8□□□□□ -1.13
AMBRA1-211ENST00000533727 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
AMBRA1-211ENST00000533727 CDIP1Q9H305 208 aa7.99□□□□□ -1.13
AMBRA1-211ENST00000533727 F8P00451 2351 aa7.99□□□□□ -1.13
AMBRA1-211ENST00000533727 PLAC8L1A1L4L8 177 aa7.99□□□□□ -1.13
AMBRA1-211ENST00000533727 CYSRT1A8MQ03 144 aa7.99□□□□□ -1.13
AMBRA1-211ENST00000533727 K7ERS5 55 aa7.99□□□□□ -1.13
AMBRA1-211ENST00000533727 CASC2Q6XLA1 102 aa7.99□□□□□ -1.13
AMBRA1-211ENST00000533727 NTM-AS1Q6ZSK4 140 aa7.98□□□□□ -1.13
AMBRA1-211ENST00000533727 MDFIQ99750 246 aa7.98□□□□□ -1.13
AMBRA1-211ENST00000533727 MTORP42345 2549 aa7.97□□□□□ -1.13
AMBRA1-211ENST00000533727 LINC01556Q5JQF7 62 aa7.97□□□□□ -1.13
AMBRA1-211ENST00000533727 WFDC13Q8IUB5 93 aa7.97□□□□□ -1.13
AMBRA1-211ENST00000533727 A0A096LNJ9 63 aa7.96□□□□□ -1.13
AMBRA1-211ENST00000533727 Q8N9L7 120 aa7.96□□□□□ -1.13
AMBRA1-211ENST00000533727 LINC00242Q5T6M2 205 aa7.96□□□□□ -1.14
AMBRA1-211ENST00000533727 SBSPONQ8IVN8 264 aa7.96□□□□□ -1.14
AMBRA1-211ENST00000533727 PRO0628Q9UI54 55 aa7.95□□□□□ -1.14
AMBRA1-211ENST00000533727 A0A096LNI7 61 aa7.95□□□□□ -1.14
AMBRA1-211ENST00000533727 C11orf72Q8NBR9 251 aa7.95□□□□□ -1.14
AMBRA1-211ENST00000533727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.95□□□□□ -1.14
AMBRA1-211ENST00000533727 TRBV7-7A0A0K0K1E9 115 aa7.94□□□□□ -1.14
AMBRA1-211ENST00000533727 CEP350Q5VT06 3117 aa7.94□□□□□ -1.14
AMBRA1-211ENST00000533727 TSPEAR-AS2P59090 65 aa7.94□□□□□ -1.14
AMBRA1-211ENST00000533727 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
AMBRA1-211ENST00000533727 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
AMBRA1-211ENST00000533727 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
AMBRA1-211ENST00000533727 C6orf223Q8N319 242 aa7.93□□□□□ -1.14
AMBRA1-211ENST00000533727 CELA1Q9UNI1 258 aa7.93□□□□□ -1.14
AMBRA1-211ENST00000533727 PRYO14603 147 aa7.93□□□□□ -1.14
AMBRA1-211ENST00000533727 Q8N3U1 123 aa7.92□□□□□ -1.14
AMBRA1-211ENST00000533727 ZNF73O43830 326 aaPredicted RBP7.92□□□□□ -1.14
AMBRA1-211ENST00000533727 X6R8D5 127 aa7.92□□□□□ -1.14
AMBRA1-211ENST00000533727 IGLV4-60A0A075B6I1 120 aa7.92□□□□□ -1.14
AMBRA1-211ENST00000533727 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
AMBRA1-211ENST00000533727 UNQ6190/PRO20217Q6UXQ8 127 aa7.91□□□□□ -1.14
AMBRA1-211ENST00000533727 FLNBO75369 2602 aaKnown RBP7.91□□□□□ -1.14
AMBRA1-211ENST00000533727 AMELXQ99217 191 aa7.91□□□□□ -1.14
AMBRA1-211ENST00000533727 COL27A1Q8IZC6 1860 aaPredicted RBP7.9□□□□□ -1.14
AMBRA1-211ENST00000533727 SMIM1B2RUZ4 78 aa7.9□□□□□ -1.14
AMBRA1-211ENST00000533727 POLQO75417 2590 aa7.9□□□□□ -1.14
AMBRA1-211ENST00000533727 Q8N814 137 aa7.9□□□□□ -1.14
AMBRA1-211ENST00000533727 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.15
AMBRA1-211ENST00000533727 SETD2Q9BYW2 2564 aaPredicted RBP7.89□□□□□ -1.15
AMBRA1-211ENST00000533727 DNAH12Q6ZR08 3092 aa7.89□□□□□ -1.15
AMBRA1-211ENST00000533727 REG3GQ6UW15 175 aa7.89□□□□□ -1.15
AMBRA1-211ENST00000533727 ACANP16112 2415 aa7.89□□□□□ -1.15
AMBRA1-211ENST00000533727 PSPHP1O15172 72 aa7.89□□□□□ -1.15
AMBRA1-211ENST00000533727 RPS28P62857 69 aaKnown RBP7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 A0A087WYN8 130 aa7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 CRYGAP11844 174 aa7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 LINC00208Q96KT6 92 aa7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 TRBV7-6A0A0J9YX20 115 aa7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 Q8NAQ8 132 aa7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 TMEM254Q8TBM7 123 aa7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 LINC00846Q9NV44 126 aa7.88□□□□□ -1.15
AMBRA1-211ENST00000533727 RPL37AP8A6NKH3 93 aa7.87□□□□□ -1.15
AMBRA1-211ENST00000533727 ESRGQ1W209 222 aa7.87□□□□□ -1.15
AMBRA1-211ENST00000533727 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
AMBRA1-211ENST00000533727 AGRNO00468 2067 aa7.87□□□□□ -1.15
AMBRA1-211ENST00000533727 NBDYA0A0U1RRE5 68 aa7.86□□□□□ -1.15
AMBRA1-211ENST00000533727 Q6ZSN1 163 aa7.86□□□□□ -1.15
AMBRA1-211ENST00000533727 KIF25-AS1Q9Y6Z4 181 aa7.86□□□□□ -1.15
AMBRA1-211ENST00000533727 COX6A2Q02221 97 aa7.86□□□□□ -1.15
AMBRA1-211ENST00000533727 C10orf25Q5T742 122 aa7.86□□□□□ -1.15
AMBRA1-211ENST00000533727 SMCPP49901 116 aaPredicted RBP7.85□□□□□ -1.15
AMBRA1-211ENST00000533727 C1orf137Q5JT78 98 aa7.84□□□□□ -1.15
AMBRA1-211ENST00000533727 PRO0461Q9UI25 63 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms