RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 C16orf90A8MZG2 172 aa13.7□□□□□ -0.22
PTP4A2-215ENST00000533408 NMUP48645 174 aa13.7□□□□□ -0.22
PTP4A2-215ENST00000533408 LINC00587B1AMM8 73 aa13.69□□□□□ -0.22
PTP4A2-215ENST00000533408 J3QQQ9 107 aa13.69□□□□□ -0.22
PTP4A2-215ENST00000533408 HERV-K104P63124 156 aa13.69□□□□□ -0.22
PTP4A2-215ENST00000533408 C2orf82Q6UX34 121 aa13.69□□□□□ -0.22
PTP4A2-215ENST00000533408 UNQ6190/PRO20217Q6UXQ8 127 aa13.69□□□□□ -0.22
PTP4A2-215ENST00000533408 MYMXA0A1B0GTQ4 84 aa13.68□□□□□ -0.22
PTP4A2-215ENST00000533408 JOSD1Q15040 202 aaPredicted RBP13.68□□□□□ -0.22
PTP4A2-215ENST00000533408 STPG4Q8N801 248 aa13.67□□□□□ -0.22
PTP4A2-215ENST00000533408 LOC107984640A0A0U1RRK4 108 aa13.66□□□□□ -0.22
PTP4A2-215ENST00000533408 ATOH7Q8N100 152 aa13.66□□□□□ -0.22
PTP4A2-215ENST00000533408 LINC00474Q9P2X8 69 aa13.66□□□□□ -0.22
PTP4A2-215ENST00000533408 NDUFA12Q9UI09 145 aa13.66□□□□□ -0.22
PTP4A2-215ENST00000533408 DNAH2Q9P225 4427 aa13.64□□□□□ -0.23
PTP4A2-215ENST00000533408 COX17Q14061 63 aa13.64□□□□□ -0.23
PTP4A2-215ENST00000533408 C10orf25Q5T742 122 aa13.64□□□□□ -0.23
PTP4A2-215ENST00000533408 C6orf48Q9UBA6 75 aa13.64□□□□□ -0.23
PTP4A2-215ENST00000533408 TLX1NBP0CAT3 122 aa13.63□□□□□ -0.23
PTP4A2-215ENST00000533408 SDIM1Q6ZPB5 146 aa13.63□□□□□ -0.23
PTP4A2-215ENST00000533408 ZNF625Q96I27 306 aaPredicted RBP13.63□□□□□ -0.23
PTP4A2-215ENST00000533408 NDUFC2-KCTD14E9PQ53 114 aa13.61□□□□□ -0.23
PTP4A2-215ENST00000533408 FUSP35637 526 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTP4A2-215ENST00000533408 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
PTP4A2-215ENST00000533408 DNAH17Q9UFH2 4485 aa13.6□□□□□ -0.23
PTP4A2-215ENST00000533408 RPL18AQ02543 176 aaKnown RBP13.59□□□□□ -0.23
PTP4A2-215ENST00000533408 DPH3Q96FX2 82 aa13.59□□□□□ -0.23
PTP4A2-215ENST00000533408 ERG28Q9UKR5 140 aa13.59□□□□□ -0.23
PTP4A2-215ENST00000533408 RYR3Q15413 4870 aa13.57□□□□□ -0.24
PTP4A2-215ENST00000533408 LINC01620Q4KN68 170 aa13.57□□□□□ -0.24
PTP4A2-215ENST00000533408 MEIG1Q5JSS6 88 aa13.57□□□□□ -0.24
PTP4A2-215ENST00000533408 VAMP8Q9BV40 100 aa13.57□□□□□ -0.24
PTP4A2-215ENST00000533408 TSPEAR-AS2P59090 65 aa13.56□□□□□ -0.24
PTP4A2-215ENST00000533408 KRTAP10-1P60331 282 aa13.56□□□□□ -0.24
PTP4A2-215ENST00000533408 GAGE2BQ13066 116 aa13.56□□□□□ -0.24
PTP4A2-215ENST00000533408 ANKRD39Q53RE8 183 aa13.56□□□□□ -0.24
PTP4A2-215ENST00000533408 ZNF815PA8K554 130 aa13.55□□□□□ -0.24
PTP4A2-215ENST00000533408 PFN2P35080 140 aa13.55□□□□□ -0.24
PTP4A2-215ENST00000533408 PTTG1IPP53801 180 aa13.55□□□□□ -0.24
PTP4A2-215ENST00000533408 LINC00158P58513 81 aa13.55□□□□□ -0.24
PTP4A2-215ENST00000533408 C9orf116Q5BN46 136 aaPredicted RBP13.55□□□□□ -0.24
PTP4A2-215ENST00000533408 DNAH10Q8IVF4 4471 aa13.55□□□□□ -0.24
PTP4A2-215ENST00000533408 IGKV2D-26A0A0A0MRZ7 120 aa13.54□□□□□ -0.24
PTP4A2-215ENST00000533408 PYY3Q5JQD4 70 aa13.54□□□□□ -0.24
PTP4A2-215ENST00000533408 S100A12P80511 92 aa13.53□□□□□ -0.24
PTP4A2-215ENST00000533408 FRAS1Q86XX4 4008 aa13.52□□□□□ -0.24
PTP4A2-215ENST00000533408 IGKV2-24A0A0C4DH68 120 aa13.52□□□□□ -0.25
PTP4A2-215ENST00000533408 MAJINQ3KP22 176 aa13.52□□□□□ -0.25
PTP4A2-215ENST00000533408 GAGE2EQ4V326 116 aa13.52□□□□□ -0.25
PTP4A2-215ENST00000533408 Q6ZRP5 223 aa13.52□□□□□ -0.25
PTP4A2-215ENST00000533408 GAGE2DQ9UEU5 116 aa13.52□□□□□ -0.25
PTP4A2-215ENST00000533408 A0A096LNI7 61 aa13.51□□□□□ -0.25
PTP4A2-215ENST00000533408 SCGB1D4Q6XE38 83 aa13.51□□□□□ -0.25
PTP4A2-215ENST00000533408 Q6ZSA8 131 aa13.51□□□□□ -0.25
PTP4A2-215ENST00000533408 A0A0J9YXY3 114 aa13.5□□□□□ -0.25
PTP4A2-215ENST00000533408 TIMM17BO60830 172 aa13.5□□□□□ -0.25
PTP4A2-215ENST00000533408 FAT2Q9NYQ8 4349 aa13.49□□□□□ -0.25
PTP4A2-215ENST00000533408 SPATA45Q537H7 98 aa13.49□□□□□ -0.25
PTP4A2-215ENST00000533408 SPACA4Q8TDM5 124 aa13.49□□□□□ -0.25
PTP4A2-215ENST00000533408 PAM16Q9Y3D7 125 aa13.49□□□□□ -0.25
PTP4A2-215ENST00000533408 SMIM13P0DJ93 91 aa13.48□□□□□ -0.25
PTP4A2-215ENST00000533408 TMEM238C9JI98 176 aa13.46□□□□□ -0.25
PTP4A2-215ENST00000533408 CDK2AP2O75956 126 aa13.46□□□□□ -0.25
PTP4A2-215ENST00000533408 PCP2Q8IVA1 136 aa13.46□□□□□ -0.25
PTP4A2-215ENST00000533408 COPS9Q8WXC6 57 aa13.46□□□□□ -0.25
PTP4A2-215ENST00000533408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.46□□□□□ -0.25
PTP4A2-215ENST00000533408 DLEU1O43261 78 aa13.45□□□□□ -0.26
PTP4A2-215ENST00000533408 SMIM6P0DI80 62 aa13.45□□□□□ -0.26
PTP4A2-215ENST00000533408 COX8AP10176 69 aa13.45□□□□□ -0.26
PTP4A2-215ENST00000533408 MIEN1Q9BRT3 115 aa13.45□□□□□ -0.26
PTP4A2-215ENST00000533408 A0A0U1RRA0 63 aa13.44□□□□□ -0.26
PTP4A2-215ENST00000533408 CHTF8P0CG12 524 aa13.44□□□□□ -0.26
PTP4A2-215ENST00000533408 Q6ZVH6 145 aa13.44□□□□□ -0.26
PTP4A2-215ENST00000533408 MIR7-3HGQ8N6C7 128 aa13.44□□□□□ -0.26
PTP4A2-215ENST00000533408 SND1-IT1Q9HBX3 110 aa13.44□□□□□ -0.26
PTP4A2-215ENST00000533408 LOC105371267A0A1B0GV96 52 aa13.43□□□□□ -0.26
PTP4A2-215ENST00000533408 RPL24P83731 157 aaKnown RBP13.43□□□□□ -0.26
PTP4A2-215ENST00000533408 TTTY13Q9BZ97 58 aa13.43□□□□□ -0.26
PTP4A2-215ENST00000533408 XAGE1AQ9HD64 81 aa13.43□□□□□ -0.26
PTP4A2-215ENST00000533408 FAM30AQ9NZY2 134 aa13.43□□□□□ -0.26
PTP4A2-215ENST00000533408 PKD1P98161 4303 aa13.43□□□□□ -0.26
PTP4A2-215ENST00000533408 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
PTP4A2-215ENST00000533408 PLAC8Q9NZF1 115 aa13.42□□□□□ -0.26
PTP4A2-215ENST00000533408 PLA2G2DQ9UNK4 145 aa13.42□□□□□ -0.26
PTP4A2-215ENST00000533408 A0A087WYN8 130 aa13.41□□□□□ -0.26
PTP4A2-215ENST00000533408 SLC25A34Q6PIV7 304 aa13.41□□□□□ -0.26
PTP4A2-215ENST00000533408 C9orf129Q5T035 196 aaKnown RBP13.4□□□□□ -0.26
PTP4A2-215ENST00000533408 SCXQ7RTU7 201 aa13.39□□□□□ -0.27
PTP4A2-215ENST00000533408 CIRBP-AS1Q8TBR5 109 aa13.39□□□□□ -0.27
PTP4A2-215ENST00000533408 LOC107984156A0A0G2JMH3 177 aa13.38□□□□□ -0.27
PTP4A2-215ENST00000533408 PANO1I0J062 215 aa13.38□□□□□ -0.27
PTP4A2-215ENST00000533408 ARL17AQ8IVW1 177 aa13.38□□□□□ -0.27
PTP4A2-215ENST00000533408 C14orf144Q96I85 54 aa13.38□□□□□ -0.27
PTP4A2-215ENST00000533408 IFITM1P13164 125 aa13.37□□□□□ -0.27
PTP4A2-215ENST00000533408 LBHQ53QV2 105 aaPredicted RBP13.37□□□□□ -0.27
PTP4A2-215ENST00000533408 EPM2AB3EWF7 344 aa13.36□□□□□ -0.27
PTP4A2-215ENST00000533408 SRSF9Q13242 221 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTP4A2-215ENST00000533408 NKAPP1Q8N9T2 125 aa13.36□□□□□ -0.27
PTP4A2-215ENST00000533408 SPANXDQ9BXN6 97 aa13.36□□□□□ -0.27
PTP4A2-215ENST00000533408 SPANXCQ9NY87 97 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms