RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 CDC42SE2Q9NRR3 84 aa14.22□□□□□ -0.13
PKP3-210ENST00000533249 A0A0J9YXV3 536 aa14.21□□□□□ -0.13
PKP3-210ENST00000533249 RNASE13Q5GAN3 156 aaKnown RBP14.21□□□□□ -0.13
PKP3-210ENST00000533249 CD164L2Q6UWJ8 174 aa14.21□□□□□ -0.13
PKP3-210ENST00000533249 SPINK6Q6UWN8 80 aa14.21□□□□□ -0.13
PKP3-210ENST00000533249 C2orf88Q9BSF0 95 aa14.21□□□□□ -0.13
PKP3-210ENST00000533249 REG3GQ6UW15 175 aa14.2□□□□□ -0.14
PKP3-210ENST00000533249 PACRGQ96M98 296 aaPredicted RBP14.2□□□□□ -0.14
PKP3-210ENST00000533249 MAP1LC3CQ9BXW4 147 aa14.2□□□□□ -0.14
PKP3-210ENST00000533249 IFITM10A6NMD0 228 aa14.19□□□□□ -0.14
PKP3-210ENST00000533249 H0Y8G0 127 aa14.19□□□□□ -0.14
PKP3-210ENST00000533249 LINC00173Q6ZV60 143 aa14.19□□□□□ -0.14
PKP3-210ENST00000533249 Q6ZRP5 223 aa14.18□□□□□ -0.14
PKP3-210ENST00000533249 GAGE2BQ13066 116 aa14.17□□□□□ -0.14
PKP3-210ENST00000533249 PMVKQ15126 192 aa14.17□□□□□ -0.14
PKP3-210ENST00000533249 HIST1H2BLQ99880 126 aa14.17□□□□□ -0.14
PKP3-210ENST00000533249 TRAV13-1A0A0B4J241 112 aa14.16□□□□□ -0.14
PKP3-210ENST00000533249 PTTG1IPP53801 180 aa14.16□□□□□ -0.14
PKP3-210ENST00000533249 KRTAP10-8P60410 259 aa14.16□□□□□ -0.14
PKP3-210ENST00000533249 KRTDAPP60985 99 aa14.16□□□□□ -0.14
PKP3-210ENST00000533249 IGLV4-69A0A075B6H9 119 aa14.15□□□□□ -0.14
PKP3-210ENST00000533249 MALP21145 153 aa14.15□□□□□ -0.14
PKP3-210ENST00000533249 SRSF9Q13242 221 aaKnown RBP eCLIP14.15□□□□□ -0.14
PKP3-210ENST00000533249 ZC2HC1BQ5TFG8 222 aa14.15□□□□□ -0.14
PKP3-210ENST00000533249 RNF213Q63HN8 5207 aa14.14□□□□□ -0.15
PKP3-210ENST00000533249 LOC107984640A0A0U1RRK4 108 aa14.14□□□□□ -0.15
PKP3-210ENST00000533249 AMELXQ99217 191 aa14.14□□□□□ -0.15
PKP3-210ENST00000533249 CST9LQ9H4G1 147 aa14.14□□□□□ -0.15
PKP3-210ENST00000533249 COX7A2LO14548 114 aa14.13□□□□□ -0.15
PKP3-210ENST00000533249 FAM104AQ969W3 186 aa14.11□□□□□ -0.15
PKP3-210ENST00000533249 CAMK2N2Q96S95 79 aa14.11□□□□□ -0.15
PKP3-210ENST00000533249 CHTOPQ9Y3Y2 248 aaKnown RBP14.11□□□□□ -0.15
PKP3-210ENST00000533249 TRAV12-1A0A0B4J245 112 aa14.1□□□□□ -0.15
PKP3-210ENST00000533249 A0A1W2PNN7 141 aa14.1□□□□□ -0.15
PKP3-210ENST00000533249 SYS1-DBNDD2H3BUS1 97 aa14.1□□□□□ -0.15
PKP3-210ENST00000533249 C3orf79P0CE67 100 aa14.1□□□□□ -0.15
PKP3-210ENST00000533249 OR10D4PQ8NGN7 298 aa14.1□□□□□ -0.15
PKP3-210ENST00000533249 C20orf202A1L168 122 aa14.09□□□□□ -0.15
PKP3-210ENST00000533249 SEC11AP67812 179 aa14.09□□□□□ -0.15
PKP3-210ENST00000533249 GEMIN7Q9H840 131 aaKnown RBP14.09□□□□□ -0.15
PKP3-210ENST00000533249 PET117Q6UWS5 81 aa14.08□□□□□ -0.16
PKP3-210ENST00000533249 C5orf38Q86SI9 138 aa14.08□□□□□ -0.16
PKP3-210ENST00000533249 APOMO95445 188 aa14.07□□□□□ -0.16
PKP3-210ENST00000533249 UBE2D1P51668 147 aa14.07□□□□□ -0.16
PKP3-210ENST00000533249 RPL18AQ02543 176 aaKnown RBP14.07□□□□□ -0.16
PKP3-210ENST00000533249 C9orf116Q5BN46 136 aaPredicted RBP14.06□□□□□ -0.16
PKP3-210ENST00000533249 F8VRH5 84 aa14.05□□□□□ -0.16
PKP3-210ENST00000533249 C2orf48Q96LS8 159 aa14.05□□□□□ -0.16
PKP3-210ENST00000533249 PSORS1C2Q9UIG4 136 aa14.05□□□□□ -0.16
PKP3-210ENST00000533249 HERVK_113P63121 156 aa14.04□□□□□ -0.16
PKP3-210ENST00000533249 SPAG11BQ08648 103 aa14.04□□□□□ -0.16
PKP3-210ENST00000533249 MRPL35Q9NZE8 188 aaKnown RBP14.04□□□□□ -0.16
PKP3-210ENST00000533249 TINCRA0A1B0GVN0 87 aa14.03□□□□□ -0.16
PKP3-210ENST00000533249 AKR1D1P51857 326 aa14.03□□□□□ -0.16
PKP3-210ENST00000533249 PMCHL2Q9BQD1 86 aa14.03□□□□□ -0.16
PKP3-210ENST00000533249 DPM2O94777 84 aa14.02□□□□□ -0.17
PKP3-210ENST00000533249 SCGB1D1O95968 90 aa14.02□□□□□ -0.17
PKP3-210ENST00000533249 LINC00242Q5T6M2 205 aa14.02□□□□□ -0.17
PKP3-210ENST00000533249 PHF5AQ7RTV0 110 aaKnown RBP14.02□□□□□ -0.17
PKP3-210ENST00000533249 IGLC3P0DOY3 106 aa14.01□□□□□ -0.17
PKP3-210ENST00000533249 PLNP26678 52 aa14.01□□□□□ -0.17
PKP3-210ENST00000533249 LINC00469Q8N7U9 141 aa14.01□□□□□ -0.17
PKP3-210ENST00000533249 IGKCP01834 107 aa14□□□□□ -0.17
PKP3-210ENST00000533249 C1orf137Q5JT78 98 aa14□□□□□ -0.17
PKP3-210ENST00000533249 TMEM170BQ5T4T1 132 aa14□□□□□ -0.17
PKP3-210ENST00000533249 LINC01545Q5VT33 79 aa14□□□□□ -0.17
PKP3-210ENST00000533249 H3BRM9 83 aa13.99□□□□□ -0.17
PKP3-210ENST00000533249 FAM19A3Q7Z5A8 133 aa13.99□□□□□ -0.17
PKP3-210ENST00000533249 ORAOV1Q8WV07 137 aa13.98□□□□□ -0.17
PKP3-210ENST00000533249 C11orf86A6NJI1 115 aa13.97□□□□□ -0.17
PKP3-210ENST00000533249 RNF151Q2KHN1 245 aa13.97□□□□□ -0.17
PKP3-210ENST00000533249 CDKN2A-AS1Q9UH64 79 aa13.95□□□□□ -0.18
PKP3-210ENST00000533249 IGHV3OR16-9A0A0B4J2B5 98 aa13.94□□□□□ -0.18
PKP3-210ENST00000533249 ZNF22P17026 224 aaPredicted RBP13.94□□□□□ -0.18
PKP3-210ENST00000533249 HERVK_113P61574 105 aa13.93□□□□□ -0.18
PKP3-210ENST00000533249 A0A087WZ39 114 aa13.92□□□□□ -0.18
PKP3-210ENST00000533249 FAM168BA1KXE4 195 aa13.92□□□□□ -0.18
PKP3-210ENST00000533249 NDUFA1O15239 70 aa13.92□□□□□ -0.18
PKP3-210ENST00000533249 C10orf25Q5T742 122 aa13.92□□□□□ -0.18
PKP3-210ENST00000533249 ATOH7Q8N100 152 aa13.92□□□□□ -0.18
PKP3-210ENST00000533249 IGLV5-45A0A087WSX0 123 aa13.91□□□□□ -0.18
PKP3-210ENST00000533249 IGLV7-43P04211 117 aa13.91□□□□□ -0.18
PKP3-210ENST00000533249 JOSD1Q15040 202 aaPredicted RBP13.91□□□□□ -0.18
PKP3-210ENST00000533249 HSBP1L1C9JCN9 74 aa13.9□□□□□ -0.18
PKP3-210ENST00000533249 SPINK8P0C7L1 97 aa13.9□□□□□ -0.18
PKP3-210ENST00000533249 UNQ6190/PRO20217Q6UXQ8 127 aa13.9□□□□□ -0.18
PKP3-210ENST00000533249 LINC01561Q8N1V8 128 aa13.9□□□□□ -0.18
PKP3-210ENST00000533249 PRR26Q8N8Z3 221 aa13.9□□□□□ -0.18
PKP3-210ENST00000533249 DIRC1Q969H9 104 aa13.9□□□□□ -0.18
PKP3-210ENST00000533249 F8WDY8 70 aa13.89□□□□□ -0.19
PKP3-210ENST00000533249 FAM19A5Q7Z5A7 132 aaPredicted RBP13.89□□□□□ -0.19
PKP3-210ENST00000533249 KRTAP11-1Q8IUC1 163 aa13.89□□□□□ -0.19
PKP3-210ENST00000533249 GAGE2EQ4V326 116 aa13.88□□□□□ -0.19
PKP3-210ENST00000533249 C6orf48Q9UBA6 75 aa13.88□□□□□ -0.19
PKP3-210ENST00000533249 GAGE2DQ9UEU5 116 aa13.88□□□□□ -0.19
PKP3-210ENST00000533249 LOC105371267A0A1B0GV96 52 aa13.87□□□□□ -0.19
PKP3-210ENST00000533249 PRSS2P07478 247 aa13.87□□□□□ -0.19
PKP3-210ENST00000533249 TOMM7Q9P0U1 55 aa13.87□□□□□ -0.19
PKP3-210ENST00000533249 TMEM223A0PJW6 202 aa13.86□□□□□ -0.19
PKP3-210ENST00000533249 TLX1NBP0CAT3 122 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms