RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 TNXBP22105 4242 aa11.05□□□□□ -0.64
SMG1-203ENST00000532700 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
SMG1-203ENST00000532700 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
SMG1-203ENST00000532700 HSBP1O75506 76 aa11.03□□□□□ -0.64
SMG1-203ENST00000532700 NDUFA6P56556 154 aa11.03□□□□□ -0.64
SMG1-203ENST00000532700 SERTAD4-AS1Q5TG53 156 aa11.03□□□□□ -0.64
SMG1-203ENST00000532700 RPL18AQ02543 176 aaKnown RBP11.02□□□□□ -0.65
SMG1-203ENST00000532700 S100A1P23297 94 aa11.01□□□□□ -0.65
SMG1-203ENST00000532700 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
SMG1-203ENST00000532700 LINC00474Q9P2X8 69 aa11.01□□□□□ -0.65
SMG1-203ENST00000532700 CDKN2A-AS1Q9UH64 79 aa11.01□□□□□ -0.65
SMG1-203ENST00000532700 NDUFA1O15239 70 aa11□□□□□ -0.65
SMG1-203ENST00000532700 KIAA0087Q14695 138 aa11□□□□□ -0.65
SMG1-203ENST00000532700 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
SMG1-203ENST00000532700 KRTAP11-1Q8IUC1 163 aa11□□□□□ -0.65
SMG1-203ENST00000532700 LINC00469Q8N7U9 141 aa11□□□□□ -0.65
SMG1-203ENST00000532700 FAM168BA1KXE4 195 aa10.99□□□□□ -0.65
SMG1-203ENST00000532700 PRSS2P07478 247 aa10.99□□□□□ -0.65
SMG1-203ENST00000532700 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
SMG1-203ENST00000532700 C9orf116Q5BN46 136 aaPredicted RBP10.99□□□□□ -0.65
SMG1-203ENST00000532700 C6orf48Q9UBA6 75 aa10.99□□□□□ -0.65
SMG1-203ENST00000532700 PLA2G2DQ9UNK4 145 aa10.99□□□□□ -0.65
SMG1-203ENST00000532700 SRSF9Q13242 221 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMG1-203ENST00000532700 PHF5AQ7RTV0 110 aaKnown RBP10.98□□□□□ -0.65
SMG1-203ENST00000532700 KRTAP7-1Q8IUC3 87 aa10.98□□□□□ -0.65
SMG1-203ENST00000532700 MRPL35Q9NZE8 188 aaKnown RBP10.98□□□□□ -0.65
SMG1-203ENST00000532700 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
SMG1-203ENST00000532700 H3BRM9 83 aa10.97□□□□□ -0.65
SMG1-203ENST00000532700 SERF1AO75920 110 aa10.97□□□□□ -0.65
SMG1-203ENST00000532700 Q6ZRP5 223 aa10.97□□□□□ -0.65
SMG1-203ENST00000532700 FAM19A2Q8N3H0 131 aa10.97□□□□□ -0.65
SMG1-203ENST00000532700 IFI27L1Q96BM0 104 aa10.97□□□□□ -0.65
SMG1-203ENST00000532700 IGLC3P0DOY3 106 aa10.96□□□□□ -0.65
SMG1-203ENST00000532700 C6orf226Q5I0X4 101 aa10.96□□□□□ -0.65
SMG1-203ENST00000532700 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
SMG1-203ENST00000532700 Q8IZM0 81 aa10.96□□□□□ -0.65
SMG1-203ENST00000532700 LINC01600Q96MT4 127 aa10.96□□□□□ -0.65
SMG1-203ENST00000532700 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
SMG1-203ENST00000532700 CKS1BP61024 79 aa10.95□□□□□ -0.66
SMG1-203ENST00000532700 PSORS1C2Q9UIG4 136 aa10.95□□□□□ -0.66
SMG1-203ENST00000532700 ATP6V1G1O75348 118 aa10.94□□□□□ -0.66
SMG1-203ENST00000532700 TRAV12-1A0A0B4J245 112 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 TRBV30A0A0K0K1B3 111 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BKO60814 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 LEPROTL1O95214 131 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BJP06899 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BOP23527 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BBP33778 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BDP58876 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 LINC00310P59036 64 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BCP62807 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST2H2BEQ16778 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BHQ93079 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BNQ99877 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 HIST1H2BMQ99879 126 aa10.93□□□□□ -0.66
SMG1-203ENST00000532700 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
SMG1-203ENST00000532700 SMIM1B2RUZ4 78 aa10.92□□□□□ -0.66
SMG1-203ENST00000532700 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
SMG1-203ENST00000532700 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
SMG1-203ENST00000532700 UBR4Q5T4S7 5183 aa10.92□□□□□ -0.66
SMG1-203ENST00000532700 SPINK8P0C7L1 97 aa10.91□□□□□ -0.66
SMG1-203ENST00000532700 CXCL5P42830 114 aa10.91□□□□□ -0.66
SMG1-203ENST00000532700 GAGE2EQ4V326 116 aa10.91□□□□□ -0.66
SMG1-203ENST00000532700 GAGE2DQ9UEU5 116 aa10.91□□□□□ -0.66
SMG1-203ENST00000532700 NUPR1O60356 82 aa10.9□□□□□ -0.66
SMG1-203ENST00000532700 TLX1NBP0CAT3 122 aa10.9□□□□□ -0.66
SMG1-203ENST00000532700 ZNF22P17026 224 aaPredicted RBP10.9□□□□□ -0.66
SMG1-203ENST00000532700 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
SMG1-203ENST00000532700 FAM19A5Q7Z5A7 132 aaPredicted RBP10.9□□□□□ -0.66
SMG1-203ENST00000532700 COX7B2Q8TF08 81 aa10.9□□□□□ -0.66
SMG1-203ENST00000532700 C9orf129Q5T035 196 aaKnown RBP10.89□□□□□ -0.67
SMG1-203ENST00000532700 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
SMG1-203ENST00000532700 F8VRH5 84 aa10.88□□□□□ -0.67
SMG1-203ENST00000532700 FABP4P15090 132 aa10.88□□□□□ -0.67
SMG1-203ENST00000532700 TMEM170BQ5T4T1 132 aa10.88□□□□□ -0.67
SMG1-203ENST00000532700 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
SMG1-203ENST00000532700 IGLV5-39A0A0G2JS06 123 aa10.86□□□□□ -0.67
SMG1-203ENST00000532700 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
SMG1-203ENST00000532700 H0Y8G0 127 aa10.85□□□□□ -0.67
SMG1-203ENST00000532700 MAP1LC3CQ9BXW4 147 aa10.84□□□□□ -0.67
SMG1-203ENST00000532700 REG3GQ6UW15 175 aa10.83□□□□□ -0.68
SMG1-203ENST00000532700 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
SMG1-203ENST00000532700 COA6Q5JTJ3 125 aaKnown RBP10.82□□□□□ -0.68
SMG1-203ENST00000532700 TMEM223A0PJW6 202 aa10.81□□□□□ -0.68
SMG1-203ENST00000532700 M0QXV9 152 aa10.81□□□□□ -0.68
SMG1-203ENST00000532700 PLNP26678 52 aa10.81□□□□□ -0.68
SMG1-203ENST00000532700 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
SMG1-203ENST00000532700 XAGE1AQ9HD64 81 aa10.79□□□□□ -0.68
SMG1-203ENST00000532700 LRP2P98164 4655 aa10.78□□□□□ -0.68
SMG1-203ENST00000532700 DPM2O94777 84 aa10.78□□□□□ -0.68
SMG1-203ENST00000532700 IGKCP01834 107 aa10.76□□□□□ -0.69
SMG1-203ENST00000532700 PRR26Q8N8Z3 221 aa10.76□□□□□ -0.69
SMG1-203ENST00000532700 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
SMG1-203ENST00000532700 KRTAP1-4P0C5Y4 121 aa10.75□□□□□ -0.69
SMG1-203ENST00000532700 H0Y9J4 135 aa10.74□□□□□ -0.69
SMG1-203ENST00000532700 HERVK_113P61574 105 aa10.74□□□□□ -0.69
SMG1-203ENST00000532700 COX17Q14061 63 aa10.74□□□□□ -0.69
SMG1-203ENST00000532700 PET117Q6UWS5 81 aa10.74□□□□□ -0.69
SMG1-203ENST00000532700 PMCHL2Q9BQD1 86 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms