RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 UBE2AP49459 152 aa4.87□□□□□ -1.63
NUP98-219ENST00000532475 AMMECR1LQ6DCA0 310 aa4.87□□□□□ -1.63
NUP98-219ENST00000532475 NKX6-2Q9C056 277 aaPredicted RBP4.87□□□□□ -1.63
NUP98-219ENST00000532475 IGLV4-69A0A075B6H9 119 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 CTXND1A0A1B0GTU2 59 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 LINC00959A0A1B0GUT2 108 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 FAM168BA1KXE4 195 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.86□□□□□ -1.63
NUP98-219ENST00000532475 CFC1BP0CG36 223 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 CFC1P0CG37 223 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 FGF6P10767 208 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 NTF3P20783 257 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 DEFA1P59665 94 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 EIF5AP63241 154 aaKnown RBP4.86□□□□□ -1.63
NUP98-219ENST00000532475 MEF2BQ02080 365 aaPredicted RBP4.86□□□□□ -1.63
NUP98-219ENST00000532475 OR5A1Q8NGJ0 315 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 YPEL4Q96NS1 127 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
NUP98-219ENST00000532475 TRAV1-1A0A0B4J248 108 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 IFNA1P01562 189 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 AKR1C3P42330 323 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 CXCL5P42830 114 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 UBE2D1P51668 147 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 MP68P56378 58 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 IFITM2Q01629 132 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 Q5BKY6 102 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 RPL7L1Q6DKI1 246 aaKnown RBP4.85□□□□□ -1.63
NUP98-219ENST00000532475 BAGE2Q86Y30 109 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 NUP35Q8NFH5 326 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 BORCS7Q96B45 105 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 CCDC32Q9BV29 185 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 EIF5A2Q9GZV4 153 aaKnown RBP4.85□□□□□ -1.63
NUP98-219ENST00000532475 PKIGQ9Y2B9 76 aa4.85□□□□□ -1.63
NUP98-219ENST00000532475 APOMO95445 188 aa4.84□□□□□ -1.63
NUP98-219ENST00000532475 IGLC6P0CF74 106 aa4.84□□□□□ -1.63
NUP98-219ENST00000532475 NMUP48645 174 aa4.84□□□□□ -1.63
NUP98-219ENST00000532475 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
NUP98-219ENST00000532475 A0A1B0GV50 99 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 MAP1LC3B2A6NCE7 125 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 JOSD1Q15040 202 aaPredicted RBP4.83□□□□□ -1.64
NUP98-219ENST00000532475 KRTAP7-1Q8IUC3 87 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 FAM104AQ969W3 186 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 RPL39LQ96EH5 51 aaKnown RBP4.83□□□□□ -1.64
NUP98-219ENST00000532475 RETNLBQ9BQ08 111 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 MARVELD1Q9BSK0 173 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 GNB1LQ9BYB4 327 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 MAP1LC3BQ9GZQ8 125 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 MED28Q9H204 178 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 BIN3Q9NQY0 253 aa4.83□□□□□ -1.64
NUP98-219ENST00000532475 C9JQL5 133 aa4.82□□□□□ -1.64
NUP98-219ENST00000532475 BCL2L11O43521 198 aa4.81□□□□□ -1.64
NUP98-219ENST00000532475 FOXA3P55318 350 aaPredicted RBP4.81□□□□□ -1.64
NUP98-219ENST00000532475 SS18Q15532 418 aa4.81□□□□□ -1.64
NUP98-219ENST00000532475 LYZL1Q6UWQ5 148 aa4.81□□□□□ -1.64
NUP98-219ENST00000532475 FA2HQ7L5A8 372 aa4.81□□□□□ -1.64
NUP98-219ENST00000532475 OR13C6PQ8NH95 151 aa4.81□□□□□ -1.64
NUP98-219ENST00000532475 TCEAL7Q9BRU2 100 aa4.81□□□□□ -1.64
NUP98-219ENST00000532475 RPP21Q9H633 154 aaKnown RBP4.81□□□□□ -1.64
NUP98-219ENST00000532475 CDC42SE2Q9NRR3 84 aa4.81□□□□□ -1.64
NUP98-219ENST00000532475 CARHSP1Q9Y2V2 147 aaKnown RBP4.81□□□□□ -1.64
NUP98-219ENST00000532475 TSTD3H0UI37 97 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 PDE6DO43924 150 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 APCSP02743 223 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 ESDP10768 282 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 AKR1C8PQ5T2L2 129 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 ZC2HC1BQ5TFG8 222 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 FAM19A3Q7Z5A8 133 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
NUP98-219ENST00000532475 C19orf71A6NCJ1 209 aa4.79□□□□□ -1.64
NUP98-219ENST00000532475 SDHAF1A6NFY7 115 aa4.79□□□□□ -1.64
NUP98-219ENST00000532475 NCR2O95944 276 aa4.79□□□□□ -1.64
NUP98-219ENST00000532475 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
NUP98-219ENST00000532475 RPL35P42766 123 aaKnown RBP4.79□□□□□ -1.64
NUP98-219ENST00000532475 ATP5L2Q7Z4Y8 100 aa4.79□□□□□ -1.64
NUP98-219ENST00000532475 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
NUP98-219ENST00000532475 ZNF706Q9Y5V0 76 aaPredicted RBP4.79□□□□□ -1.64
NUP98-219ENST00000532475 BORCS7-ASMTA0A0B4J1R7 106 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 F2Z2F3 143 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 COX7A2LO14548 114 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 TRGC1P0CF51 173 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 RNASE13Q5GAN3 156 aaKnown RBP4.78□□□□□ -1.64
NUP98-219ENST00000532475 EIF5AL1Q6IS14 154 aaKnown RBP4.78□□□□□ -1.64
NUP98-219ENST00000532475 C9orf62Q8N4C0 152 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 SMIM20Q8N5G0 67 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 ANAPC11Q9NYG5 84 aa4.78□□□□□ -1.64
NUP98-219ENST00000532475 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
NUP98-219ENST00000532475 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
NUP98-219ENST00000532475 TMEM241Q24JQ0 296 aa4.77□□□□□ -1.65
NUP98-219ENST00000532475 TSKUQ8WUA8 353 aa4.77□□□□□ -1.65
NUP98-219ENST00000532475 SFT2D1Q8WV19 159 aa4.77□□□□□ -1.65
NUP98-219ENST00000532475 RNASE7Q9H1E1 156 aaKnown RBP4.77□□□□□ -1.65
NUP98-219ENST00000532475 CYTL1Q9NRR1 136 aa4.77□□□□□ -1.65
NUP98-219ENST00000532475 KRTAP16-1A8MUX0 517 aa4.76□□□□□ -1.65
NUP98-219ENST00000532475 C1orf196B1AJZ1 125 aa4.76□□□□□ -1.65
NUP98-219ENST00000532475 I3L3M4 83 aa4.76□□□□□ -1.65
NUP98-219ENST00000532475 ZNF861PO60384 105 aa4.76□□□□□ -1.65
NUP98-219ENST00000532475 SCO1O75880 301 aa4.76□□□□□ -1.65
NUP98-219ENST00000532475 UBE2BP63146 152 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms