RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 MYCBP2O75592 4640 aa11.91□□□□□ -0.5
GMDS-208ENST00000530927 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
GMDS-208ENST00000530927 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
GMDS-208ENST00000530927 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
GMDS-208ENST00000530927 CIRBPQ14011 172 aaKnown RBP11.91□□□□□ -0.5
GMDS-208ENST00000530927 CARD19Q96LW7 228 aa11.91□□□□□ -0.5
GMDS-208ENST00000530927 UBE2D1P51668 147 aa11.9□□□□□ -0.5
GMDS-208ENST00000530927 KRTAP10-4P60372 401 aaPredicted RBP11.9□□□□□ -0.5
GMDS-208ENST00000530927 LINC00242Q5T6M2 205 aa11.9□□□□□ -0.5
GMDS-208ENST00000530927 Q6ZRU5 148 aa11.9□□□□□ -0.5
GMDS-208ENST00000530927 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
GMDS-208ENST00000530927 MAP1LC3CQ9BXW4 147 aa11.9□□□□□ -0.5
GMDS-208ENST00000530927 A0A096LNI7 61 aa11.89□□□□□ -0.51
GMDS-208ENST00000530927 M0R143 59 aa11.89□□□□□ -0.51
GMDS-208ENST00000530927 SYCNQ0VAF6 134 aa11.89□□□□□ -0.51
GMDS-208ENST00000530927 PET117Q6UWS5 81 aa11.89□□□□□ -0.51
GMDS-208ENST00000530927 A0A087WYN8 130 aa11.88□□□□□ -0.51
GMDS-208ENST00000530927 TRAV12-1A0A0B4J245 112 aa11.88□□□□□ -0.51
GMDS-208ENST00000530927 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
GMDS-208ENST00000530927 FAM19A3Q7Z5A8 133 aa11.88□□□□□ -0.51
GMDS-208ENST00000530927 DPH3Q96FX2 82 aa11.88□□□□□ -0.51
GMDS-208ENST00000530927 UQCR10Q9UDW1 63 aa11.88□□□□□ -0.51
GMDS-208ENST00000530927 PAM16Q9Y3D7 125 aa11.88□□□□□ -0.51
GMDS-208ENST00000530927 SEC11AP67812 179 aa11.87□□□□□ -0.51
GMDS-208ENST00000530927 SPATA45Q537H7 98 aa11.87□□□□□ -0.51
GMDS-208ENST00000530927 ORAOV1Q8WV07 137 aa11.87□□□□□ -0.51
GMDS-208ENST00000530927 A0A0J9YXV3 536 aa11.86□□□□□ -0.51
GMDS-208ENST00000530927 SYS1-DBNDD2H3BUS1 97 aa11.86□□□□□ -0.51
GMDS-208ENST00000530927 MAJINQ3KP22 176 aa11.86□□□□□ -0.51
GMDS-208ENST00000530927 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
GMDS-208ENST00000530927 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
GMDS-208ENST00000530927 CHTOPQ9Y3Y2 248 aaKnown RBP11.86□□□□□ -0.51
GMDS-208ENST00000530927 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
GMDS-208ENST00000530927 H0Y8G0 127 aa11.85□□□□□ -0.51
GMDS-208ENST00000530927 APOMO95445 188 aa11.85□□□□□ -0.51
GMDS-208ENST00000530927 IGLC3P0DOY3 106 aa11.85□□□□□ -0.51
GMDS-208ENST00000530927 HERVK_113P63121 156 aa11.85□□□□□ -0.51
GMDS-208ENST00000530927 FLG2Q5D862 2391 aaPredicted RBP11.85□□□□□ -0.51
GMDS-208ENST00000530927 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
GMDS-208ENST00000530927 A0A087WZ39 114 aa11.83□□□□□ -0.52
GMDS-208ENST00000530927 C10orf25Q5T742 122 aa11.83□□□□□ -0.52
GMDS-208ENST00000530927 PKHD1L1Q86WI1 4243 aa11.82□□□□□ -0.52
GMDS-208ENST00000530927 F8VRH5 84 aa11.82□□□□□ -0.52
GMDS-208ENST00000530927 ODF1Q14990 250 aa11.82□□□□□ -0.52
GMDS-208ENST00000530927 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
GMDS-208ENST00000530927 SNHG12Q9BXW3 62 aa11.82□□□□□ -0.52
GMDS-208ENST00000530927 PLAC8Q9NZF1 115 aa11.82□□□□□ -0.52
GMDS-208ENST00000530927 RPL37AP61513 92 aaKnown RBP11.81□□□□□ -0.52
GMDS-208ENST00000530927 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
GMDS-208ENST00000530927 LINC01545Q5VT33 79 aa11.81□□□□□ -0.52
GMDS-208ENST00000530927 STPG4Q8N801 248 aa11.81□□□□□ -0.52
GMDS-208ENST00000530927 MRPL35Q9NZE8 188 aaKnown RBP11.81□□□□□ -0.52
GMDS-208ENST00000530927 HNRNPA3P51991 378 aaKnown RBP11.8□□□□□ -0.52
GMDS-208ENST00000530927 KIAA0087Q14695 138 aa11.8□□□□□ -0.52
GMDS-208ENST00000530927 UNQ6190/PRO20217Q6UXQ8 127 aa11.8□□□□□ -0.52
GMDS-208ENST00000530927 HSBP1L1C9JCN9 74 aa11.79□□□□□ -0.52
GMDS-208ENST00000530927 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
GMDS-208ENST00000530927 PTTG1IPP53801 180 aa11.78□□□□□ -0.52
GMDS-208ENST00000530927 LINC00469Q8N7U9 141 aa11.78□□□□□ -0.52
GMDS-208ENST00000530927 CDKN2A-AS1Q9UH64 79 aa11.78□□□□□ -0.52
GMDS-208ENST00000530927 LOC107984640A0A0U1RRK4 108 aa11.77□□□□□ -0.52
GMDS-208ENST00000530927 C11orf86A6NJI1 115 aa11.77□□□□□ -0.52
GMDS-208ENST00000530927 RPL18AQ02543 176 aaKnown RBP11.77□□□□□ -0.52
GMDS-208ENST00000530927 C2orf82Q6UX34 121 aa11.77□□□□□ -0.52
GMDS-208ENST00000530927 LINC01561Q8N1V8 128 aa11.77□□□□□ -0.52
GMDS-208ENST00000530927 C6orf48Q9UBA6 75 aa11.77□□□□□ -0.52
GMDS-208ENST00000530927 LRP1Q07954 4544 aaKnown RBP11.77□□□□□ -0.52
GMDS-208ENST00000530927 H3BRM9 83 aa11.77□□□□□ -0.53
GMDS-208ENST00000530927 PLNP26678 52 aa11.77□□□□□ -0.53
GMDS-208ENST00000530927 NDUFA1O15239 70 aa11.76□□□□□ -0.53
GMDS-208ENST00000530927 DPM2O94777 84 aa11.76□□□□□ -0.53
GMDS-208ENST00000530927 PMCHL2Q9BQD1 86 aa11.76□□□□□ -0.53
GMDS-208ENST00000530927 A0A1B0GV90 55 aa11.75□□□□□ -0.53
GMDS-208ENST00000530927 A0A1W2PNN7 141 aa11.75□□□□□ -0.53
GMDS-208ENST00000530927 IGKCP01834 107 aa11.75□□□□□ -0.53
GMDS-208ENST00000530927 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
GMDS-208ENST00000530927 TMEM170BQ5T4T1 132 aa11.75□□□□□ -0.53
GMDS-208ENST00000530927 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
GMDS-208ENST00000530927 FAT3Q8TDW7 4589 aa11.73□□□□□ -0.53
GMDS-208ENST00000530927 C9orf116Q5BN46 136 aaPredicted RBP11.73□□□□□ -0.53
GMDS-208ENST00000530927 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
GMDS-208ENST00000530927 RNF151Q2KHN1 245 aa11.72□□□□□ -0.53
GMDS-208ENST00000530927 Q6ZRP5 223 aa11.72□□□□□ -0.53
GMDS-208ENST00000530927 ATOH7Q8N100 152 aa11.72□□□□□ -0.53
GMDS-208ENST00000530927 LINC00474Q9P2X8 69 aa11.72□□□□□ -0.53
GMDS-208ENST00000530927 HERC1Q15751 4861 aa11.72□□□□□ -0.53
GMDS-208ENST00000530927 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
GMDS-208ENST00000530927 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
GMDS-208ENST00000530927 SLC25A34Q6PIV7 304 aa11.7□□□□□ -0.54
GMDS-208ENST00000530927 PKIGQ9Y2B9 76 aa11.7□□□□□ -0.54
GMDS-208ENST00000530927 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
GMDS-208ENST00000530927 F8WDY8 70 aa11.69□□□□□ -0.54
GMDS-208ENST00000530927 FAM168BA1KXE4 195 aa11.69□□□□□ -0.54
GMDS-208ENST00000530927 PRSS2P07478 247 aa11.69□□□□□ -0.54
GMDS-208ENST00000530927 GAGE2EQ4V326 116 aa11.69□□□□□ -0.54
GMDS-208ENST00000530927 C7orf33Q8WU49 177 aa11.69□□□□□ -0.54
GMDS-208ENST00000530927 GAGE2DQ9UEU5 116 aa11.69□□□□□ -0.54
GMDS-208ENST00000530927 IGLV5-39A0A0G2JS06 123 aa11.67□□□□□ -0.54
GMDS-208ENST00000530927 TLX1NBP0CAT3 122 aa11.67□□□□□ -0.54
GMDS-208ENST00000530927 COX8AP10176 69 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms